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  1. No Access

    Article

    Molecular map** of rice chromosomes

    We report the construction of an RFLP genetic map of rice (Oryza sativa) chromosomes. The map is comprised of 135 loci corresponding to clones selected from a PstI genomic library. This molecular map covers 1,389...

    S. R. McCouch, G. Kochert, Z. H. Yu, Z. Y. Wang… in Theoretical and Applied Genetics (1988)

  2. No Access

    Chapter

    RFLP Map** of Genes Conferring Complete and Partial Resistance in a Rice Cultivar with Durable Resistance to Blast

    Moroberekan is a traditional upland rice cultivar that has shown durable resistance to rice blast. It was crossed to the highly susceptible cultivar C039, and 281 F7 recombinant inbred (RI) lines were produced...

    G. L. Wang, D. J. Mackill, J. M. Bonman, S. R. McCouch… in Durability of Disease Resistance (1993)

  3. No Access

    Article

    Orientation and integration of the classical and molecular genetic maps of chromosome 11 in rice

    The classical genetic map and molecular map of rice chromosome 11 were oriented to facilitate the use of these maps for genetic studies and rice improvement. Three morphological markers (d-27, z-2, and la) were c...

    M. L. P. Abenes, R. E. Tabien, S. R. McCouch, R. Ikeda, P. Ronald, G. S. Khush… in Euphytica (1994)

  4. No Access

    Article

    The semidwarf gene, sd-1, of rice (Oryza sativa L.). II. Molecular map** and marker-assisted selection

    To establish the location of the semidwarf gene, sd-1, the anthocyanin activator (A), purple node (Pn), purple auricle (Pau), and the isozyme locus, EstI-2, in relation to DNA markers on the molecular linkage map...

    Y. G. Cho, M. Y. Eun, S. R. McCouch, Y. A. Chae in Theoretical and Applied Genetics (1994)

  5. No Access

    Article

    Molecular analysis of the inheritance of the S-5 locus, conferring wide compatibility in Indica/Japonica hybrids of rice (O. sativa L.)

    RFLP analysis was conducted on a population derived from a three-way cross to determine the location of the hybrid sterility locus, S-5, in relation to mapped molecular markers and to identify markers that would ...

    S. Yanagihara, S. R. McCouch, K. Ishikawa, Y. Ogi… in Theoretical and Applied Genetics (1995)

  6. No Access

    Article

    Locating genes associated with root morphology and drought avoidance in rice via linkage to molecular markers

    This research was undertaken to identify and map quantitative trait loci (QTLs) associated with five parameters of rice root morphology and to determine if these QTLs are located in the same chromosomal region...

    M. C. Champoux, G. Wang, S. Sarkarung, D. J. Mackill… in Theoretical and Applied Genetics (1995)

  7. No Access

    Article

    Genetic diversity and phylogeny analysis of Anabaena azollae based on RFLPs detected in Azolla-Anabaena azollae DNA complexes using nif gene probes

    The cyanobacterium Anabaena has both symbiotic and free-living forms. The genetic diversity of Anabaena strains symbiotically associated with the aquatic fern Azolla and the evolutionary relationships among these...

    B. Van Coppenolle, S. R. McCouch, I. Watanabe, N. Huang… in Theoretical and Applied Genetics (1995)

  8. No Access

    Article

    Molecular-marker-facilitated investigation on the ability to stimulate N2 fixation in the rhizosphere by irrigated rice plants

    An F2 population, consisting of 231 individuals derived from a cross between rice cultivars with a similar growing duration, Palawan and IR42, was utilized to investigate the genetic nature of rice varietal abili...

    P. Wu, G. Zhang, J. K. Ladha, S. R. McCouch, N. Huang in Theoretical and Applied Genetics (1995)

  9. No Access

    Article

    Genetic diversity and its relationship to hybrid performance and heterosis in rice as revealed by PCR-based markers

    Ten elite inbred lines (four japonica, six indica), chosen from those widely used in the hybrid rice breeding program at Human Hybrid Rice Research Center in China, were crossed to produce all possible hybrids ex...

    J. **ao, J. Li, L. Yuan, S. R. McCouch, S. D. Tanksley in Theoretical and Applied Genetics (1996)

  10. No Access

    Article

    Map** quantitative trait loci associated with root penetration ability in rice (Oryza sativa L.)

    Root penetration ability is an important factor for rice drought resistance in areas with soils subject to both compaction and periodic water deficits. However, breeding for root penetration ability is inhibit...

    J. D. Ray, L. Yu, S. R. McCouch, M. C. Champoux… in Theoretical and Applied Genetics (1996)

  11. No Access

    Article

    Molecular map** of the ge s gene controlling the super-giant embryo character in rice (Oryza sativa L.)

    The giant-embryo character is useful for quality improvement in rice. Three alleles controlling embryo size have been reported at the ge locus. Based on trisomic analysis, this locus is known to reside on chromos...

    H. -J. Koh, M. -H. Heu, S. R. McCouch in Theoretical and Applied Genetics (1996)

  12. No Access

    Article

    Molecular map** of genes for resistance to rice blast (Pyricularia grisea Sacc.)

    Two dominant genes conferring complete resistance to specific isolates of the rice blast fungus, Pyricularia grisea Sacc., were located on the molecular map of rice in this study. Pi-l(t) is a blast resistance ge...

    Z. H. Yu, D. J. Mackill, J. M. Bonman, S. R. McCouch… in Theoretical and Applied Genetics (1996)

  13. No Access

    Article

    Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice (Oryza sativa L.)

    Microsatellite markers containing simple sequence repeats (SSR) are a valuable tool for genetic analysis. Our objective is to augment the existing RFLP map of rice with simple sequence length polymorphisms (SS...

    O. Panaud, X. Chen, S. R. McCouch in Molecular and General Genetics MGG (1996)

  14. No Access

    Article

    Chromosomal regions associated with segregation distortion of molecular markers in F2 , backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L.)

    Chromosomal regions associated with marker segregation distortion in rice were compared based on six molecular linkage maps. Map** populations were derived from one interspecific backcross and five intersub...

    Y. Xu, L. Zhu, J. **ao, N. Huang, S. R. McCouch in Molecular and General Genetics MGG (1997)

  15. No Access

    Article

    Linkage map** of starch branching enzyme III in rice (Oryza sativa L.) and prediction of location of orthologous genes in other grasses

     The chromosomal position of Starch Branching Enzyme III (SBEIII) was determined via linkage to RFLP markers on an existing molecular map of rice (Oryza sativa L.). A cDNA of 890 bp was generated using specific P...

    S. E. Harrington, H. F. J. Bligh, W. D. Park… in Theoretical and Applied Genetics (1997)

  16. No Access

    Article

    Microsatellite and sequence-tagged site markers diagnostic for the rice bacterial leaf blight resistance gene xa-5

     Microsatellite and sequence-tagged site (STS) markers tightly linked to the bacterial leaf blight (BLB) resistance gene xa-5 were identified in this study. A survey was conducted to find molecular markers that d...

    M. W. Blair, S. R. McCouch in Theoretical and Applied Genetics (1997)

  17. No Access

    Article

    Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)

     Ninety-four newly developed microsatellite markers were integrated into existing RFLP framework maps of four rice populations, including two doubled haploid, a recombinant inbred, and an interspecific backcro...

    X. Chen, S. Temnykh, Y. Xu, Y. G. Cho, S. R. McCouch in Theoretical and Applied Genetics (1997)

  18. No Access

    Article

    Integrated map of AFLP, SSLP and RFLP markers using a recombinant inbred population of rice (Oryza sativa L.)

     A molecular map of rice consisting of 231 amplified fragment length polymorphisms (AFLPs), 212 restriction fragment length polymorphisms (RFLPs), 86 simple-sequence length polymorphisms (SSLPs), five isozyme ...

    Y. G. Cho, S. R. McCouch, M. Kuiper, M.-R. Kang, J. Pot… in Theoretical and Applied Genetics (1998)

  19. No Access

    Article

    Anchor probes for comparative map** of grass genera

     Comparative map** of cDNA clones provides an important foundation for examining structural conservation among the chromosomes of diverse genera and for establishing hypotheses about the relationship between...

    A. E. Van Deynze, M. E. Sorrells, W. D. Park… in Theoretical and Applied Genetics (1998)

  20. No Access

    Article

    Molecular map** of a new genic male-sterility gene causing chalky endosperm in rice ( Oryza sativa L.)

    A genic male-sterility gene newly induced by chemical mutagenesis, tentatively designated as ms-h(t), was located on the molecular map of rice and tested for its effect on chalky endosperm. Bulked segregant an...

    H.J. Koh, Y.H. Son, M.H. Heu, H.S. Lee, S.R. McCouch in Euphytica (1999)

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