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    Article

    Single-cell omics meets organoid cultures

    Roser Vento-Tormo highlights the synergy of single-cell omics and organoids by Camp et al., who used single-cell RNA sequencing to characterize the cell–cell communication events driving tissue formation in hu...

    Roser Vento-Tormo in Nature Reviews Genetics (2023)

  2. Article

    Open Access

    Author Correction: Map** the temporal and spatial dynamics of the human endometrium in vivo and in vitro

    Luz Garcia-Alonso, Louis-François Handfield, Kenny Roberts in Nature Genetics (2023)

  3. Article

    Open Access

    Epigenetic and transcriptomic reprogramming in monocytes of severe COVID-19 patients reflects alterations in myeloid differentiation and the influence of inflammatory cytokines

    COVID-19 manifests with a wide spectrum of clinical phenotypes, ranging from asymptomatic and mild to severe and critical. Severe and critical COVID-19 patients are characterized by marked changes in the myelo...

    Gerard Godoy-Tena, Anis Barmada, Octavio Morante-Palacios in Genome Medicine (2022)

  4. Article

    Open Access

    An introduction to spatial transcriptomics for biomedical research

    Single-cell transcriptomics (scRNA-seq) has become essential for biomedical research over the past decade, particularly in developmental biology, cancer, immunology, and neuroscience. Most commercially availab...

    Cameron G. Williams, Hyun Jae Lee, Takahiro Asatsuma, Roser Vento-Tormo in Genome Medicine (2022)

  5. Article

    Open Access

    Map** the temporal and spatial dynamics of the human endometrium in vivo and in vitro

    The endometrium, the mucosal lining of the uterus, undergoes dynamic changes throughout the menstrual cycle in response to ovarian hormones. We have generated dense single-cell and spatial reference maps of th...

    Luz Garcia-Alonso, Louis-François Handfield, Kenny Roberts in Nature Genetics (2021)

  6. Article

    Open Access

    IL-4 orchestrates STAT6-mediated DNA demethylation leading to dendritic cell differentiation

    The role of cytokines in establishing specific transcriptional programmes in innate immune cells has long been recognized. However, little is known about how these extracellular factors instruct innate immune ...

    Roser Vento-Tormo, Carlos Company, Javier Rodríguez-Ubreva in Genome Biology (2016)

  7. Article

    Open Access

    NF-κB-direct activation of microRNAs with repressive effects on monocyte-specific genes is critical for osteoclast differentiation

    Monocyte-to-osteoclast conversion is a unique terminal differentiation process that is exacerbated in rheumatoid arthritis and bone metastasis. The mechanisms implicated in upregulating osteoclast-specific gen...

    Lorenzo de la Rica, Antonio García-Gómez, Natalia R Comet in Genome Biology (2015)