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  1. Article

    Open Access

    The genome of Diuraphis noxia, a global aphid pest of small grains

    The Russian wheat aphid, Diuraphis noxia Kurdjumov, is one of the most important pests of small grains throughout the temperate regions of the world. This phytotoxic aphid causes severe systemic damage symptoms i...

    Scott J Nicholson, Michael L Nickerson, Michael Dean, Yan Song in BMC Genomics (2015)

  2. Article

    Open Access

    SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data

    We have developed a new method, SOAPfuse, to identify fusion transcripts from paired-end RNA-Seq data. SOAPfuse applies an improved partial exhaustion algorithm to construct a library of fusion junction sequen...

    Wenlong Jia, Kunlong Qiu, Minghui He, Pengfei Song, Quan Zhou, Feng Zhou in Genome Biology (2013)

  3. Article

    Open Access

    A locally funded Puerto Rican parrot (Amazona vittata) genome sequencing project increases avian data and advances young researcher education

    Amazona vittata is a critically endangered Puerto Rican endemic bird, the only surviving native parrot species in the United States territory, and the first parrot in the large Neotropical genus Amazona, to be s...

    Taras K Oleksyk, Jean-Francois Pombert, Daniel Siu, Anyimilehidi Mazo-Vargas in GigaScience (2012)

  4. No Access

    Article

    Alternative transcript initiation and novel post-transcriptional processing of a leucine-rich repeat receptor-like protein kinase gene that responds to short-day photoperiodic floral induction in morning glory (Ipomoea nil)

    A gene (inrpk1) encoding a putative receptor-like protein kinase was isolated from the Japanese morning glory, Ipomoea (Pharbitis) nil Roth. cv. Violet. The receptor-like portion of the largest derived polypeptid...

    Carole L. Bassett, Michael L. Nickerson, Reuben A. Cohen in Plant Molecular Biology (2000)