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  1. No Access

    Article

    The genomic landscape of pediatric acute lymphoblastic leukemia

    Acute lymphoblastic leukemia (ALL) is the most common childhood cancer. Here, using whole-genome, exome and transcriptome sequencing of 2,754 childhood patients with ALL, we find that, despite a generally low ...

    Samuel W. Brady, Kathryn G. Roberts, Zhaohui Gu, Lei Shi, Stanley Pounds in Nature Genetics (2022)

  2. No Access

    Article

    Exploring genomic alteration in pediatric cancer using ProteinPaint

    **n Zhou, Michael N Edmonson, Mark R Wilkinson, Aman Patel, Gang Wu in Nature Genetics (2016)

  3. Article

    Open Access

    High-quality permanent draft genome sequence of the Mimosa asperata - nodulating Cupriavidus sp. strain AMP6

    Cupriavidus sp. strain AMP6 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Mimosa asperata collected in Santa Ana National Wildlife Re...

    Sofie E. De Meyer, Matthew Parker, Peter Van Berkum in Standards in Genomic Sciences (2015)

  4. Article

    Open Access

    High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica

    Bradyrhizobium sp. Ai1a-2 is is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen fixing root nodule of Andira inermis collected from Tres Pied...

    Rui Tian, Matthew Parker, Rekha Seshadri, TBK Reddy in Standards in Genomic Sciences (2015)

  5. Article

    Open Access

    High-quality permanent draft genome sequence of Bradyrhizobium sp. Tv2a.2, a microsymbiont of Tachigali versicolor discovered in Barro Colorado Island of Panama

    Bradyrhizobiumsp. Tv2a.2 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen-fixing root nodule of Tachigali versicolor collected in Barro Col...

    Rui Tian, Matthew Parker, Rekha Seshadri, TBK Reddy in Standards in Genomic Sciences (2015)

  6. Article

    Open Access

    High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York

    Bradyrhizobium sp. Th.b2 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen-fixing root nodule of Amphicarpaea bracteata collected in Johnson...

    Rui Tian, Matthew Parker, Rekha Seshadri, TBK Reddy in Standards in Genomic Sciences (2015)

  7. No Access

    Article

    The landscape of somatic mutations in infant MLL-rearranged acute lymphoblastic leukemias

    Anna Andersson, Tanja Gruber, James Downing and colleagues report a genomic analysis of infant acute lymphoblastic leukemias with MLL rearrangements. They identify recurrent activating mutations in tyrosine kinas...

    Anna K Andersson, **g Ma, Jianmin Wang, **ang Chen in Nature Genetics (2015)

  8. Article

    Open Access

    Genome sequence of Microvirga lupini strain LUT6T, a novel Lupinus alphaproteobacterial microsymbiont from Texas

    Microvirga lupini LUT6T is an aerobic, non-motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Lupinus texensis. LUT6T was isolated in 2006 from a nodu...

    Wayne Reeve, Matthew Parker, Rui Tian, Lynne Goodwin in Standards in Genomic Sciences (2014)

  9. No Access

    Article

    The genomic landscape of hypodiploid acute lymphoblastic leukemia

    Linda Holmfeldt, Lei Wei et al. report whole-genome and exome sequencing of 40 childhood hypodiploid acute lymphoblastic leukemias.

    Linda Holmfeldt, Lei Wei, Ernesto Diaz-Flores, Michael Walsh in Nature Genetics (2013)

  10. Article

    Open Access

    Assessing telomeric DNA content in pediatric cancers using whole-genome sequencing data

    Telomeres are the protective arrays of tandem TTAGGG sequence and associated proteins at the termini of chromosomes. Telomeres shorten at each cell division due to the end-replication problem and are maintaine...

    Matthew Parker, **ang Chen, Armita Bahrami, James Dalton, Michael Rusch in Genome Biology (2012)