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  1. Chapter

    Pangenomes and Selection: The Public Goods Hypothesis

    The evolution and structure of prokaryotic genomes are largely shaped by horizontal gene transfer. This process is so prevalent that DNA can be seen as a public good—a resource that is shared across individua...

    James O. McInerney, Fiona J. Whelan, Maria Rosa Domingo-Sananes in The Pangenome (2020)

  2. Article

    Open Access

    Erratum to: Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins

    Claire C Morgan, Noeleen B Loughran, Thomas A Walsh in BMC Evolutionary Biology (2017)

  3. Article

    Open Access

    Erratum to: Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response

    Mark Lynch, Thomas A. Walsh, Izabela Marszalowska in BMC Evolutionary Biology (2017)

  4. Article

    Open Access

    Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response

    Clostridium difficile is a nosocomial pathogen prevalent in hospitals worldwide and increasingly common in the community. Sequence differences have been shown to be present in the Surf...

    Mark Lynch, Thomas A. Walsh, Izabela Marszalowska in BMC Evolutionary Biology (2017)

  5. Article

    Open Access

    Molecular adaptation of telomere associated genes in mammals

    Placental mammals display a huge range of life history traits, including size, longevity, metabolic rate and germ line generation time. Although a number of general trends have been proposed between these trai...

    Claire C Morgan, Ann M Mc Cartney, Mark TA Donoghue in BMC Evolutionary Biology (2013)

  6. Article

    Open Access

    Colon cancer associated genes exhibit signatures of positive selection at functionally significant positions

    Cancer, much like most human disease, is routinely studied by utilizing model organisms. Of these model organisms, mice are often dominant. However, our assumptions of functional equivalence fail to consider t...

    Claire C Morgan, Kabita Shakya, Andrew Webb, Thomas A Walsh in BMC Evolutionary Biology (2012)

  7. No Access

    Article

    Selection and the Cell Cycle: Positive Darwinian Selection in a Well-Known DNA Damage Response Pathway

    Cancer is a common occurrence in multi-cellular organisms and is not strictly limited to the elderly in a population. It is therefore possible that individuals with genotypes that protect against early onset c...

    Mary J. O’Connell in Journal of Molecular Evolution (2010)

  8. Article

    Open Access

    Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins

    Reproductive proteins are central to the continuation of all mammalian species. The evolution of these proteins has been greatly influenced by environmental pressures induced by pathogens, rival sperm, sexual ...

    Claire C Morgan, Noeleen B Loughran, Thomas A Walsh in BMC Evolutionary Biology (2010)

  9. Article

    Open Access

    The phylogeny of the mammalian heme peroxidases and the evolution of their diverse functions

    The mammalian heme peroxidases (MHPs) are a medically important group of enzymes. Included in this group are myeloperoxidase, eosinophil peroxidase, lactoperoxidase, and thyroid peroxidase. These enzymes are a...

    Noeleen B Loughran, Brendan O'Connor, Ciarán Ó'Fágáin in BMC Evolutionary Biology (2008)

  10. No Access

    Article

    Gamma Chain Receptor Interleukins: Evidence for Positive Selection Driving the Evolution of Cell-to-Cell Communicators in the Mammalian Immune System

    The interleukin-2 receptor (IL-2R) γ chain, or common γ chain (γc), is the hub of a protein interaction network in the mammalia that is central to defense against disease. It is the indispensable subunit of th...

    Mary J. O’Connell, James O. McInerney in Journal of Molecular Evolution (2005)