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  1. Article

    Open Access

    FSTVAL: a new web tool to validate bulk flanking sequence tags

    Information about a transgene locus is one of the major concerns in transgenic research because expression of the transgene or a gene interrupted by the integration event could be affected. Thus, the flanking ...

    Joung Sug Kim, Jiye Kim, Tae-Ho Lee, Kyong Mi Jun, Tea Hoon Kim in Plant Methods (2012)

  2. No Access

    Article

    Analysis of representative organ-specific genes and promoters of rice using a 3’ ORF-oriented long oligomer microarray

    Organ-specific transcription factors and promoters are likely to be useful for testing the effects of changes in expression of regulatory genes related to agronomical traits in rice. Here, we analyze the trans...

    Songhwa Chae, Joung Sug Kim, Kyong Mi Jun, Yoon-Mok Pahk in Journal of Plant Biology (2016)

  3. Article

    Open Access

    Genome-wide identification of grain filling genes regulated by the OsSMF1 transcription factor in rice

    Spatial- and temporal-specific expression patterns are primarily regulated at the transcriptional level by gene promoters. Therefore, it is important to identify the binding motifs of transcription factors to ...

    Joung Sug Kim, Songhwa Chae, Kyong Mi Jun, Yoon-Mok Pahk, Tae-Ho Lee in Rice (2017)

  4. Article

    Open Access

    Development of Tos17 insertion mutants from Korean cultivars ‘Ilmibyeo’ and ‘Baeg**ju1ho’ (Oryza sativa L.)

    Rice is one of the most important crops globally and a model plant for genomic studies of monocots. With the release of complete genome sequences, the next challenge is to develop various resources based on fu...

    Kyong Mi Jun, Joung Sug Kim, Songhwa Chae, Yoon-Mok Pahk in Applied Biological Chemistry (2019)

  5. Article

    Open Access

    Rice protein-binding microarrays: a tool to detect cis-acting elements near promoter regions in rice

    The present study showed that a rice (Oryza sativa)-specific protein-binding microarray (RPBM) can be applied to analyze DNA-binding motifs with a TF where binding is evaluated in extended natural promoter region...

    Joung Sug Kim, SongHwa Chae, Kyong Mi Jun, Gang-Seob Lee, Jong-Seong Jeon in Planta (2021)

  6. No Access

    Article

    Heterologous production of multiple triterpenes, including taraxasterol, in transgenic tobacco overexpressing Taraxacum coreanum oxidosqualene cyclase (TcOSC1)

    Pentacyclic triterpenes are isoprene-derived secondary metabolites that are synthesized by the cyclization of 2,3-oxidosqualene. Two pentacyclic triterpenoids, taraxasterol and ψ-taraxasterol, are particularly...

    Jung-Yeon Han, Han Suk Choi, Hye-Jeong Jo, Kyong Mi Jun in Plant Biotechnology Reports (2022)