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  1. Article

    Open Access

    Image-based consensus molecular subty** in rectal cancer biopsies and response to neoadjuvant chemoradiotherapy

    The development of deep learning (DL) models to predict the consensus molecular subtypes (CMS) from histopathology images (imCMS) is a promising and cost-effective strategy to support patient stratification. H...

    Maxime W. Lafarge, Enric Domingo, Korsuk Sirinukunwattana in npj Precision Oncology (2024)

  2. Article

    Open Access

    Correction: Continuous Indexing of Fibrosis (CIF): improving the assessment and classification of MPN patients

    Hosuk Ryou, Korsuk Sirinukunwattana, Alan Aberdeen, Gillian Grindstaff in Leukemia (2023)

  3. Article

    Open Access

    Continuous Indexing of Fibrosis (CIF): improving the assessment and classification of MPN patients

    The grading of fibrosis in myeloproliferative neoplasms (MPN) is an important component of disease classification, prognostication and monitoring. However, current fibrosis grading systems are only semi-quanti...

    Hosuk Ryou, Korsuk Sirinukunwattana, Alan Aberdeen, Gillian Grindstaff in Leukemia (2023)

  4. Article

    Open Access

    Transcriptome and genome evolution during HER2-amplified breast neoplasia

    The acquisition of oncogenic drivers is a critical feature of cancer progression. For some carcinomas, it is clear that certain genetic drivers occur early in neoplasia and others late. Why these drivers are s...

    Peipei Lu, Joseph Foley, Chunfang Zhu, Katherine McNamara in Breast Cancer Research (2021)

  5. Article

    Open Access

    Associations of reproductive breast cancer risk factors with breast tissue composition

    We investigated the associations of reproductive factors with the percentage of epithelium, stroma, and fat tissue in benign breast biopsy samples.

    Lusine Yaghjyan, Rebecca J. Austin-Datta, Hannah Oh in Breast Cancer Research (2021)