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  1. Article

    Open Access

    Automated pipette failure monitoring using image processing for point-of-care testing devices

    The accuracy and precision of liquid handling can be altered by several causes including wearing or failure of parts, and human error. The last cause is crucial since point-of-care testing (POCT) devices can b...

    Chan-Young Park, Jun Yeon, Hye-Jeong Song, Yu-Seop Kim in BioMedical Engineering OnLine (2018)

  2. Article

    Open Access

    A study of polymerase chain reaction device control via cloud using Firebase Cloud Messaging protocol

    In this paper, we propose a system for data monitoring and control of polymerase chain reaction (PCR) externally. PCR is a technique for amplifying a desired DNA molecule by repeatedly synthesizing a specific ...

    Jong-Dae Kim, So-Yeon Lee, Yu-Seop Kim, Hye-Jeong Song in BioMedical Engineering OnLine (2018)

  3. Article

    Open Access

    Comparison of named entity recognition methodologies in biomedical documents

    Biomedical named entity recognition (Bio-NER) is a fundamental task in handling biomedical text terms, such as RNA, protein, cell type, cell line, and DNA. Bio-NER is one of the most elementary and core tasks ...

    Hye-Jeong Song, Byeong-Cheol Jo, Chan-Young Park in BioMedical Engineering OnLine (2018)

  4. Article

    Open Access

    Evaluation-independent system for DNA section amplification

    In general, the image analysis of nucleic acid for detecting DNA is dependent on the gel documentation system. These experiments may deal with harmful staining agents and are time consuming. To address these i...

    Deuk-Ju Lee, Jong-Dae Kim, Yu-Seop Kim, Hye-Jeong Song in BioMedical Engineering OnLine (2018)

  5. Article

    Open Access

    Performance evaluation of optimal real-time polymerase chain reaction achieved with reduced voltage

    Polymerase chain reaction (PCR) is used in nucleic acid tests of infectious diseases in point-of-care testing. Previous studies have demonstrated real-time PCR that uses a micro-PCR chip made of packing tape, ...

    Ji-Soo Hwang, Jong-Dae Kim, Yu-Seop Kim, Hye-Jeong Song in BioMedical Engineering OnLine (2018)

  6. Article

    Open Access

    Best serum biomarker combination for ovarian cancer classification

    Screening test using CA-125 is the most common test for detecting ovarian cancer. However, the level of CA-125 is diverse by variable condition other than ovarian cancer. It has led to misdiagnosis of ovarian ...

    Hye-Jeong Song, Eun-Suk Yang, Jong-Dae Kim in BioMedical Engineering OnLine (2018)

  7. Article

    Open Access

    Permanent magnet actuation for magnetic bead-based DNA extraction

    Recently, automatic molecular diagnostic devices to extract DNA have been extensively developed using magnetic beads. While various methods can be applied to the control of the beads, the efficiency of the con...

    Chang-Young Park, Young-Hyun Park, Yu-Seop Kim in BioMedical Engineering OnLine (2018)

  8. Article

    Open Access

    A method of inferring the relationship between Biomedical entities through correlation analysis on text

    One of the most important processes in a machine learning-based natural language processing is to represent words. The one-hot representation that has been commonly used has a large size of vector and assumes ...

    Hye-Jeong Song, Byeong-Hun Yoon, Young-Shin Youn in BioMedical Engineering OnLine (2018)

  9. No Access

    Chapter and Conference Paper

    Looking for Better Combination of Biomarker Selection and Classification Algorithm for Early Screening of Ovarian Cancer

    This paper demonstrates and evaluates the classification performance of the optimal biomarker combinations that can diagnose ovarian cancer under Luminex exposed environment. The optimal combinations were dete...

    Yu-Seop Kim, Jong-Dae Kim, Min-Ki Jang in Multimedia and Ubiquitous Engineering (2013)

  10. No Access

    Chapter and Conference Paper

    Calibration of Urine Biomarkers for Ovarian Cancer Diagnosis

    For the ovarian cancer diagnosis with biomarkers in urine samples, various calibration functions are selected and investigated to compensate the variability of their concentrations. The 15 biomarkers tested in...

    Yu-Seop Kim, Eun-Suk Yang, Kyoung-Min Nam in Multimedia and Ubiquitous Engineering (2013)

  11. No Access

    Article

    Design optimization of a xenogeneic bone plate and screws using the Taguchi and finite element methods

    This paper studies the influence of design factors on a xenogeneic bone plate and screws for fractured bone fusion in a numerical animal model for experiment via simulation. A canine ulna was the fractured bon...

    Jong-Dae Kim, Nam-Soo Kim, Chang-Seob Hong in International Journal of Precision Enginee… (2011)

  12. No Access

    Article

    The influence on the contact condition and initial fixation stability of the main design parameters of a self-expansion type anterior cruciate ligament fixation device

    This paper proposes a self-expansion type anterior cruciate ligament fixation device. The proposed fixation device provides graft fixation force by maintaining contact with the bone tunnel. Since the device ma...

    Jong-Dae Kim, Chae-Youn Oh, Cheol-Sang Kim in Journal of Mechanical Science and Technology (2008)

  13. No Access

    Chapter and Conference Paper

    Location Estimation of In Vivo Robotic Capsule Relative to Arrayed Power Transmission Coils

    This paper presents a tracking method for an in vivo robotic capsule whose power is supplied from one of the multiple power transmission coils. The proposed method is aiming at selecting the best coupled one a...

    Ji Soo Hwang, Jong Dae Kim, Munho Ryu in World Congress on Medical Physics and Biom… (2007)

  14. No Access

    Chapter and Conference Paper

    Impedance Matching by Series Condensers for Power Receivers of In Vivo Robotic Capsules

    Wireless robotic capsules with locomotive mechanisms are being developed to provide thorough diagnosis at suspicious areas including small bowel. Current battery technology does not accommodate multifunctional...

    Munho Ryu, Jong Dae Kim, Jongwon Kim in World Congress on Medical Physics and Biom… (2007)

  15. No Access

    Chapter and Conference Paper

    3 Dimensional Power Receiver for In Vivo Robotic Capsules

    A 3D wireless power receiver is introduced for in vivo robotic capsules. It is designed to retrieve hundreds mW of power regardless of its orientation relative to the magnetic field generated from the outside ...

    Jong Dae Kim, Munho Ryu, Jongwon Kim in World Congress on Medical Physics and Biom… (2007)

  16. No Access

    Chapter and Conference Paper

    Determination of the number of turns of the power receiving coil For the in vivo robotic capsule

    This paper introduces a strategy how to determine the number of turns of the receiving coil for in vivo robotic capsules to maximize the regulated load power. For the expected functionality additional to the e...

    Jong Dae Kim, Munho Ryu, Jongwon Kim in World Congress on Medical Physics and Biom… (2007)

  17. No Access

    Chapter and Conference Paper

    A Fast Local Motion Estimation Method and Its Applications to Ultrasound Image Sequences

    Multi-grid method is applied to optical flow estimation in ultrasound image sequences. The existing multigrid method is modified to accommodate the nonlinearity in the motion model. The nonlinear iteration, in...

    Soo Chul Lim, Jong Dae Kim, Baek Sop Kim in World Congress on Medical Physics and Biom… (2007)