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  1. Article

    Open Access

    Tracking deuterium uptake in hydroponically grown maize roots using correlative helium ion microscopy and Raman micro-spectroscopy

    Investigations into the growth and self-organization of plant roots is subject to fundamental and applied research in various areas such as botany, agriculture, and soil science. The growth activity of the pla...

    Yalda Davoudpour, Steffen Kümmel, Niculina Musat, Hans Hermann Richnow in Plant Methods (2023)

  2. Article

    Open Access

    Acetyl-CoA-Carboxylase 1-mediated de novo fatty acid synthesis sustains Lgr5+ intestinal stem cell function

    Basic processes of the fatty acid metabolism have an important impact on the function of intestinal epithelial cells (IEC). However, while the role of cellular fatty acid oxidation is well appreciated, it is n...

    Shuting Li, Chia-Wen Lu, Elia C. Diem, Wang Li, Melanie Guderian in Nature Communications (2022)

  3. No Access

    Article

    Comparative proteomics unravelled the hexachlorocyclohexane (HCH) isomers specific responses in an archetypical HCH degrading bacterium Sphingobium indicum B90A

    Hexachlorocyclohexane (HCH) is a persistent organochlorine pesticide that poses threat to different life forms. Sphingobium indicum B90A that belong to sphingomonad is well-known for its ability to degrade HCH is...

    Monika Sharma, Durgesh Narain Singh in Environmental Science and Pollution Resear… (2021)

  4. No Access

    Reference Work Entry In depth

    Compound-Specific Stable Isotope Analysis (CSIA) for Evaluating Degradation of Organic Pollutants: An Overview of Field Case Studies

    Compound-specific stable isotope analysis (CSIA) is an advanced monitoring tool for evaluating natural and stimulated degradation of organic pollutants at contaminated field sites. CSIA enables the deciphermen...

    Kevin Kuntze, Heinrich Eisenmann in Anaerobic Utilization of Hydrocarbons, Oil… (2020)

  5. No Access

    Reference Work Entry In depth

    Compound-Specific Isotope Analysis for Studying the Biological Degradation of Hydrocarbons

    Compound-specific isotope fractionation analysis (CSIA) has become a promising approach for studying biological degradation of hydrocarbons in the environment. The approach makes use of isotope fractionation p...

    Carsten Vogt, Florin Musat in Anaerobic Utilization of Hydrocarbons, Oil… (2020)

  6. No Access

    Article

    Anaerobic oxidation of ethane by archaea from a marine hydrocarbon seep

    Ethane is the second most abundant component of natural gas in addition to methane, and—similar to methane—is chemically unreactive. The biological consumption of ethane under anoxic conditions was suggested b...

    Song-Can Chen, Niculina Musat, Oliver J. Lechtenfeld, Heidrun Paschke in Nature (2019)

  7. No Access

    Living Reference Work Entry In depth

    Compound-Specific Stable Isotope Analysis (CSIA) for Evaluating Degradation of Organic Pollutants: An Overview of Field Case Studies

    Compound-specific stable isotope analysis (CSIA) is an advanced monitoring tool for evaluating natural and stimulated degradation of organic pollutants at contaminated field sites. CSIA enables the deciphermen...

    Kevin Kuntze, Heinrich Eisenmann in Anaerobic Utilization of Hydrocarbons, Oil…

  8. No Access

    Living Reference Work Entry In depth

    Compound-Specific Isotope Analysis for Studying the Biological Degradation of Hydrocarbons

    Compound-specific isotope fractionation analysis (CSIA) has become a promising approach for studying biological degradation of hydrocarbons in the environment. The approach makes use of isotope fractionation p...

    Carsten Vogt, Florin Musat in Anaerobic Utilization of Hydrocarbons, Oil…

  9. Article

    Open Access

    Mycelium-mediated transfer of water and nutrients stimulates bacterial activity in dry and oligotrophic environments

    Fungal–bacterial interactions are highly diverse and contribute to many ecosystem processes. Their emergence under common environmental stress scenarios however, remains elusive. Here we use a synthetic microb...

    Anja Worrich, Hryhoriy Stryhanyuk, Niculina Musat, Sara König in Nature Communications (2017)

  10. No Access

    Article

    Thermophilic archaea activate butane via alkyl-coenzyme M formation

    The anaerobic formation and oxidation of methane involve unique enzymatic mechanisms and cofactors, all of which are believed to be specific for C1-compounds. Here we show that an anaerobic thermophilic enrichmen...

    Rafael Laso-Pérez, Gunter Wegener, Katrin Knittel, Friedrich Widdel in Nature (2016)

  11. Article

    Open Access

    Lessons learned from the microbial ecology resulting from different inoculation strategies for biogas production from waste products of the bioethanol/sugar industry

    During strategic planning of a biogas plant, the local availability of resources for start-up and operation should be taken into consideration for a cost-efficient process. Because most bioethanol/sugar indust...

    Athaydes Francisco Leite, Leandro Janke, Hauke Harms in Biotechnology for Biofuels (2016)

  12. No Access

    Chapter

    CO2BioPerm—Influence of Bio-geochemical CO2-Transformation Processes on the Long-Term Permeability

    The RECOBIO projects (Hoth et al. in Recycling of sequestrated CO2 by microbial—biogeochemical transformation in the deep subsurface—RECOBIO 2009a; Geotechnol Sci Rep 14:58–65, 2009b; Untersuchung der biogeochemi...

    Nils Hoth, Claudia Gniese, Jana Rakoczy in Geological Storage of CO2 – Long Term Secu… (2015)

  13. No Access

    Article

    Diversity of dechlorination pathways and organohalide respiring bacteria in chlorobenzene dechlorinating enrichment cultures originating from river sludge

    Anaerobic reductive dechlorination of hexachlorobenzene (HCB) and three isomers of tetrachlorobenzene (TeCB) (1,2,3,4-, 1,2,3,5- and 1,2,4,5-TeCB) was investigated in microcosms containing chloroaromatic conta...

    Pieter Vandermeeren, Steffi Herrmann, Danuta Cichocka, Pieter Busschaert in Biodegradation (2014)

  14. No Access

    Chapter

    Relevance of Deep-Subsurface Microbiology for Underground Gas Storage and Geothermal Energy Production

    This chapter gives the reader an introduction into the microbiology of deep geological systems with a special focus on potential geobiotechnological applications and respective risk assessments. It has been kn...

    Claudia Gniese, Petra Bombach, Jana Rakoczy, Nils Hoth in Geobiotechnology II (2014)

  15. No Access

    Chapter

    Bioremediation via in situ Microbial Degradation of Organic Pollutants

    Contamination of soil and natural waters by organic pollutants is a global problem. The major organic pollutants of point sources are mineral oil, fuel components, and chlorinated hydrocarbons. Research from t...

    Carsten Vogt, Hans Hermann Richnow in Geobiotechnology II (2014)

  16. Article

    Erratum to: Investigation of the geochemical impact of CO2 on shallow groundwater: design and implementation of a CO2 injection test in Northeast Germany

    Anita Peter, Hendrik Lamert, Matthias Beyer, Götz Hornbruch in Environmental Earth Sciences (2013)

  17. No Access

    Article

    Influence of mass transfer on stable isotope fractionation

    Biodegradation of contaminants is a common remediation strategy for subsurface environments. To monitor the success of such remediation means a quantitative assessment of biodegradation at the field scale is r...

    Martin Thullner, Anko Fischer in Applied Microbiology and Biotechnology (2013)

  18. No Access

    Article

    Investigation of the geochemical impact of CO2 on shallow groundwater: design and implementation of a CO2 injection test in Northeast Germany

    A small scale and temporally limited CO2 injection test was performed in a shallow aquifer to investigate the geochemical impact of CO2 upon such aquifers and to apply and verify different monitoring methods. Det...

    Anita Peter, Hendrik Lamert, Matthias Beyer, Götz Hornbruch in Environmental Earth Sciences (2012)

  19. No Access

    Article

    Detection of monochlorobenzene metabolizing bacteria under anoxic conditions by DNA-stable isotope probing

    Cultivation-independent analyses were applied to study the structural diversity of the bacterial community which developed in groundwater inoculated microcosms actively metabolizing monochlorobenzene (MCB) und...

    Paula M. Martínez-Lavanchy, Anja Bettina Dohrmann, Gwenaël Imfeld in Biodegradation (2011)

  20. No Access

    Article

    Experimental investigation of nitrogen and oxygen isotope fractionation in nitrate and nitrite during denitrification

    In batch experiments, we studied the isotope fractionation of nitrogen and oxygen during denitrification of two bacterial strains (Azoarcus sp. strain DSM 9056 and Pseudomonas pseudoalcaligenes strain F10). Denit...

    Kay Knöller, Carsten Vogt, Marika Haupt, Stefan Feisthauer in Biogeochemistry (2011)

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