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  1. Article

    Open Access

    Clonal growth characteristics and diversity patterns of different Clintonia udensis (Liliaceae) diploid and tetraploid cytotypes in the Hualongshan Mountains

    Polyploidization plays an important role in plant evolution and biodiversity. However, intraspecific polyploidy compared to interspecific polyploidy received less attention. Clintonia udensis (Liliaceae) possess ...

    Mian Han, Qiyang Qie, Meilan Liu, Huiqin Meng, Tiantian Wu, Yadi Yang in Scientific Reports (2024)

  2. No Access

    Article

    Identification and expression analysis of XIP gene family members in rice

    Xylanase inhibitor proteins (XIP) are widely distributed in the plant kingdom, and also exist in rice. However, a systematic bioinformatics analysis of this gene family in rice (OsXIP) has not been conducted to d...

    Manman Zhao, Zhiwei Liu, Jiangtao Gan, Chen Yang, Ai Lu, Qingqing Han in Genetica (2024)

  3. Article

    Open Access

    Genome-wide identification, characterization and expression of C2H2 zinc finger gene family in Opisthopappus species under salt stress

    The C2H2 zinc finger protein family plays important roles in plants. However, precisely how C2H2s function in Opisthopappus (Opisthopappus taihangensis and Opisthopappus longilobus) remains unclear.

    **aojuan Zhou, Ting Gao, Yimeng Zhang, Mian Han, Yuexin Shen, Yu Su in BMC Genomics (2024)

  4. No Access

    Article

    Geographic distribution pattern and ecological niche differentiation of endangered Opisthopappus in Taihang Mountains

    Environmental changes could dramatically affect biodiversity and the distribution of species. Predicting and understanding the dynamics of vegetation distribution can provide valuable insights into ecosystems’...

    Li Liu, Hao Zhang, En Zang, Qiyang Qie, Shan He, Weili Hao in Brazilian Journal of Botany (2023)

  5. No Access

    Article

    N6-Methyladenosine and physiological response divergence confer autotetraploid enhanced salt tolerance compared to its diploid Hordeum bulbosum

    Polyploid species have played an essential role in plant evolution, exemplified by adaptive advantages to abiotic stress. N6-Methyladenosine (m6A) is suggested to play an important role in stress response. Howeve...

    Margaret Scarrow, Ning Chen, Andrea Namaganda in Physiology and Molecular Biology of Plants (2022)

  6. No Access

    Article

    N6-Methyladenosine dynamic changes and differential methylation in wheat grain development

    More methylation changes occur in late interval than in early interval of wheat seed development with protein and the starch synthesis-related pathway enriched in the later stages.

    Wenxiang Li, Yi Yu, Xuanrong Chen, Qian Fang, Anqi Yang, **nyu Chen, Lei Wu in Planta (2022)

  7. No Access

    Article

    Cloning, expression analysis and molecular marker development of cinnamyl alcohol dehydrogenase gene in common wheat

    In common wheat, stem strength is one of the key factors for lodging resistance, which is influenced by lignin content. Cinnamyl alcohol dehydrogenase (CAD) is a vital enzyme in the pathway of lignin biosynthe...

    Can Chen, **gming Chang, Sheng Wang, Jie Lu, Yi Liu, Hongqi Si, Genlou Sun in Protoplasma (2021)

  8. Article

    Open Access

    Localized environmental heterogeneity drives the population differentiation of two endangered and endemic Opisthopappus Shih species

    Climate heterogeneity not only indirectly shapes the genetic structures of plant populations, but also drives adaptive divergence by impacting demographic dynamics. The variable localized climates and topograp...

    Hang Ye, Zhi Wang, Huimin Hou, Jiahui Wu, Yue Gao, Wei Han in BMC Ecology and Evolution (2021)

  9. No Access

    Article

    MiR396 regulatory network and its expression during grain development in wheat

    Wheat contains the largest number of miR396 family with 17 miR396 in Poaceae. MiR396 regulatory network underlying wheat grain development has not comprehensively been explored. Our results showed that precursor ...

    Yi Yu, Fangyao Sun, Ning Chen, Genlou Sun, Cheng-Yu Wang, De-**ang Wu in Protoplasma (2021)

  10. Article

    Open Access

    Demographic history and genetic differentiation of an endemic and endangered Ulmus lamellosa (Ulmus)

    Ulmus lamellosa (one of the ancient species of Ulmus) is an endemic and endangered plant that has undergone climatic oscillations and geographical changes. The elucidation of its demographic history and genetic d...

    Huimin Hou, Hang Ye, Zhi Wang, Jiahui Wu, Yue Gao, Wei Han in BMC Plant Biology (2020)

  11. No Access

    Article

    Physiological and transcriptional response to heat stress in heat-resistant and heat-sensitive maize (Zea mays L.) inbred lines at seedling stage

    To understand the molecular and physiological mechanism underlying the heat stress in maize, transcriptional and physiological response to heat stress in the heat-resistant Huangzaosi (HZS) and heat-sensitive ...

    De-Chuan Wu, Jia-Fei Zhu, Zhong-Ze Shu, Wei Wang, Cheng Yan, Shan-Bin Xu in Protoplasma (2020)

  12. Article

    Open Access

    Population genetic variation characterization of the boreal tree Acer ginnala in Northern China

    Genetic diversity and differentiation are revealed particularly through spatio-temporal environmental heterogeneity. Acer ginnala, as a deciduous shrub/small tree, is a foundation species in many terrestrial ecos...

    Hang Ye, Jiahui Wu, Zhi Wang, Huimin Hou, Yue Gao, Wei Han in Scientific Reports (2020)

  13. No Access

    Article

    MicroRNA-mediated responses to colchicine treatment in barley

    In Hordeum vulgare, nine differentially expressed novel miRNAs were induced by colchicine. Five novel miRNA in colchicine solution showed the opposite expression patterns as those in water.

    Fang-Yao Sun, Lin Liu, Yi Yu, **n-Ming Ruan, Cheng-Yu Wang, Qun-Wen Hu in Planta (2020)

  14. Article

    Open Access

    Map** dynamic QTL dissects the genetic architecture of grain size and grain filling rate at different grain-filling stages in barley

    Grain filling is an important growth process in formation of yield and quality for barley final yield determination. To explore the grain development behavior during grain filling period in barley, a high-dens...

    Binbin Du, Qifei Wang, Genlou Sun, **feng Ren, Yun Cheng in Scientific Reports (2019)

  15. Article

    Open Access

    Genome constitution and evolution of Elytrigia lolioides inferred from Acc1, EF-G, ITS, TrnL-F sequences and GISH

    Elytrigia lolioides (Kar. et Kir.) Nevski, which is a perennial, cross-pollinating wheatgrass that is distributed in Russia and Kazakhstan, is classified into Elytrigia, Elymus, and Lophopyrum genera by taxonomis...

    Long Wang, Yuanyuan Jiang, Qinghua Shi, Yi Wang, Lina Sha, **ng Fan in BMC Plant Biology (2019)

  16. Article

    Open Access

    Identification of QTL underlying the leaf length and area of different leaves in barley

    Leaf is the main organ of photosynthesis, which significantly impacts crop yield. A high-density linkage map containing 1894 single nucleotide polymorphism (SNP) and 68 simple sequence repeats (SSR) markers wa...

    Binbin Du, Lipan Liu, Qifei Wang, Genlou Sun, **feng Ren, Chengdao Li in Scientific Reports (2019)

  17. Article

    Open Access

    Transcriptome analysis reveals new microRNAs-mediated pathway involved in anther development in male sterile wheat

    337S is a novel bi-pole-photo-thermo-sensitive genic male sterile line in wheat, and sensitive to both long day length/high temperature and short day length/low temperature condition. Although the regulatory f...

    Longqing Sun, Genlou Sun, Chenxia Shi, Dongfa Sun in BMC Genomics (2018)

  18. Article

    Open Access

    Detection of QTLs for seedling characteristics in barley (Hordeum vulgare L.) grown under hydroponic culture condition

    Seedling characteristics play significant roles in the growth and development of barley (Hordeum vulgare L.), including stable stand establishment, water and nutrients uptake, biotic resistance and abiotic stress...

    Qifei Wang, Genlou Sun, **feng Ren, Jibin Wang, Binbin Du, Chengdao Li in BMC Genetics (2017)

  19. Article

    Open Access

    Transcriptome analysis reveals plant response to colchicine treatment during on chromosome doubling

    Colchicine was commonly used to artificially double chromosomes while the transcriptome changes in colchicine treated plants has rarely been characterized. To understand the molecular mechanism of colchicine o...

    Kai Zhou, Paige Fleet, Eviatar Nevo, **nquan Zhang, Genlou Sun in Scientific Reports (2017)

  20. Article

    Open Access

    Molecular evidence of RNA polymerase II gene reveals the origin of worldwide cultivated barley

    The origin and domestication of cultivated barley have long been under debate. A population-based resequencing and phylogenetic analysis of the single copy of RPB2 gene was used to address barley domestication, t...

    Yonggang Wang, **feng Ren, Dongfa Sun, Genlou Sun in Scientific Reports (2016)

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