7 Result(s)
within
David M. Aanensen
Science, Humanities and Social Sciences, multidisciplinary
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Article
Open AccessContext-specific emergence and growth of the SARS-CoV-2 Delta variant
The SARS-CoV-2 Delta (Pango lineage B.1.617.2) variant of concern spread globally, causing resurgences of COVID-19 worldwide1,2. The emergence of the Delta variant in the UK occurred on the background of a hetero...
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Article
Open AccessA global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch
As whole-genome sequencing capacity becomes increasingly decentralized, there is a growing opportunity for collaboration and the sharing of surveillance data within and between countries to inform typhoid cont...
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Article
Open AccessIntegrating whole-genome sequencing within the National Antimicrobial Resistance Surveillance Program in the Philippines
National networks of laboratory-based surveillance of antimicrobial resistance (AMR) monitor resistance trends and disseminate these data to AMR stakeholders. Whole-genome sequencing (WGS) can support surveill...
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Article
Open AccessThe phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa
There is paucity of data regarding the geographical distribution, incidence, and phylogenetics of multi-drug resistant (MDR) Salmonella Typhi in sub-Saharan Africa. Here we present a phylogenetic reconstruction o...
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Article
Open AccessDevelopment and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi
Parasitic chytrid fungi have emerged as a significant threat to amphibian species worldwide, necessitating the development of techniques to isolate these pathogens into culture for research purposes. However, ...
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Article
Open AccessEmergence and clonal spread of colistin resistance due to multiple mutational mechanisms in carbapenemase-producing Klebsiella pneumoniae in London
Carbapenemase-producing Enterobacteriaceae (CPE) are emerging worldwide, limiting therapeutic options. Mutational and plasmid-mediated mechanisms of colistin resistance have both been reported. The emergence a...
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Article
Open AccessWhole genome resequencing of the human parasite Schistosoma mansoni reveals population history and effects of selection
Schistosoma mansoni is a parasitic fluke that infects millions of people in the develo** world. This study presents the first application of population genomics to S. mansoni based on high-coverage resequencing...
