Skip to main content

and
  1. Article

    Open Access

    Population genomics and antimicrobial resistance dynamics of Escherichia coli in wastewater and river environments

    Aquatic environments are key niches for the emergence, evolution and dissemination of antimicrobial resistance. However, the population diversity and the genetic elements that drive the dynamics of resistant b...

    Jose F. Delgado-Blas, Cristina M. Ovejero, Sophia David in Communications Biology (2021)

  2. No Access

    Article

    Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread

    Public health interventions to control the current epidemic of carbapenem-resistant Klebsiella pneumoniae rely on a comprehensive understanding of its emergence and spread over a wide range of geographical scales...

    Sophia David, Sandra Reuter, Simon R. Harris, Corinna Glasner in Nature Microbiology (2019)

  3. No Access

    Article

    Gene exchange drives the ecological success of a multi-host bacterial pathogen

    The capacity for some pathogens to jump into different host-species populations is a major threat to public health and food security. Staphylococcus aureus is a multi-host bacterial pathogen responsible for impor...

    Emily J. Richardson, Rodrigo Bacigalupe, Ewan M. Harrison in Nature Ecology & Evolution (2018)

  4. Article

    Species Mash-up

    This month's Genome Watch describes how Mash can be used to tackle comparisons between large amounts of genomic and metagenomic sequence data for taxonomic applications.

    Silvia Argimón, David M. Aanensen in Nature Reviews Microbiology (2016)

  5. Article

    Open Access

    Assigning strains to bacterial species via the internet

    Methods for assigning strains to bacterial species are cumbersome and no longer fit for purpose. The concatenated sequences of multiple house-kee** genes have been shown to be able to define and circumscribe...

    Cynthia J Bishop, David M Aanensen, Gregory E Jordan, Mogens Kilian in BMC Biology (2009)