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  1. No Access

    Article

    Dense genomic sampling identifies highways of pneumococcal recombination

    Stephen Bentley, Paul Turner and colleagues report whole-genome sequencing of 3,085 pneumococci collected from a densely sampled pneumococcal carriage cohort in a Thai refugee camp over a 3-year period. They p...

    Claire Chewapreecha, Simon R Harris, Nicholas J Croucher, Claudia Turner… in Nature Genetics (2014)

  2. Article

    Open Access

    A community-driven resource for genomic epidemiology and antimicrobial resistance prediction of Neisseria gonorrhoeae at Pathogenwatch

    Antimicrobial-resistant (AMR) Neisseria gonorrhoeae is an urgent threat to public health, as strains resistant to at least one of the two last-line antibiotics used in empiric therapy of gonorrhoea, ceftriaxone a...

    Leonor Sánchez-Busó, Corin A. Yeats, Benjamin Taylor, Richard J. Goater… in Genome Medicine (2021)

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  3. Article

    Phylogenetic and phylodynamic approaches to understanding and combating the early SARS-CoV-2 pandemic

    Determining the transmissibility, prevalence and patterns of movement of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections is central to our understanding of the impact of the pandemic an...

    Stephen W. Attwood, Sarah C. Hill, David M. Aanensen… in Nature Reviews Genetics (2022)

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