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Article
Open AccessPhyloFinder: An intelligent search engine for phylogenetic tree databases
Bioinformatic tools are needed to store and access the rapidly growing phylogenetic data. These tools should enable users to identify existing phylogenetic trees containing a specified taxon or set of taxa and...
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Chapter
MRF Supertrees
We survey and present new results and techniques for the supertree method matrix representation using flip** (MRF). The method resolves inconsistencies among the input trees by working with the matrix represent...
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Chapter
The Perfect Phylogeny Problem
A phylogeny is a tree representation of the evolutionary history of a set of taxa (organisms, biological sequences, populations, or languages). Thus, phylogeny construction is among the basic computational proble...