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  1. No Access

    Article

    Hsa_circ_0007590/PTBP1 complex reprograms glucose metabolism by reducing the stability of m6A-modified PTEN mRNA in pancreatic ductal adenocarcinoma

    The role of circular RNAs (circRNAs) in glucose metabolism in pancreatic duct adenocarcinoma (PDAC) remains elusive. Through RNA sequencing of cells cultured under conditions of glucose deprivation, we identif...

    Dandan Zheng, Wenying Chen, Juanfei Peng, **anxian Huang in Cancer Gene Therapy (2024)

  2. Article

    Open Access

    Dosimetric evaluation of LINAC-based single-isocenter multi-target multi-fraction stereotactic radiosurgery with more than 20 targets: comparing MME, HyperArc, and RapidArc

    To compare the dosimetric quality of three widely used techniques for LINAC-based single-isocenter multi-target multi-fraction stereotactic radiosurgery (fSRS) with more than 20 targets: dynamic conformal arc ...

    Hyunuk Jung, Jihyung Yoon, Olga Dona Lemus, Sean Tanny, Yuwei Zhou in Radiation Oncology (2024)

  3. Article

    Open Access

    Targeting MYH9 represses USP14-mediated NAP1L1 deubiquitination and cell proliferation in glioma

    Myosin heavy chain 9 (MYH9) plays an important role in a number of diseases. Nevertheless, the function of MYH9 in glioma is unclear. The present research aimed to investigate the role of MYH9 in glioma and de...

    Zigui Chen, **n Yan, Changfeng Miao, Longyang Liu, Su Liu in Cancer Cell International (2023)

  4. No Access

    Article

    Biallelic CLCN2 mutations cause retinal degeneration by impairing retinal pigment epithelium phagocytosis and chloride channel function

    CLCN2 encodes a two-pore homodimeric chloride channel protein (CLC-2) that is widely expressed in human tissues. The association between Clcn2 and the retina is well-established in mice, as loss-of-function of CL...

    ** Xu, Zhuolin Chen, Jianchi Ma, Yongli Shan, Yuan Wang, Bingbing **e in Human Genetics (2023)

  5. No Access

    Protocol

    B-Cell Epitope Predictions Using Computational Methods

    Identifying protein antigenic epitopes that are recognizable by antibodies is a key step in immunologic research. This type of research has broad medical applications, such as new immunodiagnostic reagent disc...

    Dandan Zheng, Shide Liang, Chi Zhang in Computer-Aided Antibody Design (2023)

  6. Article

    Open Access

    Activation of the clock gene TIMELESS by H3k27 acetylation promotes colorectal cancer tumorigenesis by binding to Myosin-9

    Colorectal cancer (CRC) is a common tumor characterized by its high mortality. However, the underlying molecular mechanisms that drive CRC tumorigenesis are unclear. Clock genes have important roles in tumor d...

    Meng Cao, Yi Wang, Yi**g **ao, Dandan Zheng in Journal of Experimental & Clinical Cancer … (2021)

  7. Article

    Open Access

    Correction to: Correlation of dosimetric factors with the development of symptomatic radiation pneumonitis in stereotactic body radiotherapy

    An amendment to this paper has been published and can be accessed via the original article.

    Jeffrey M. Ryckman, Michael Baine, Joseph Carmicheal in Radiation Oncology (2021)

  8. Article

    Open Access

    Correction to: The structure–activity relationship review of the main bioactive constituents of Morus genus plants

    The article The structure–activity relationship review of the main bioactive constituents of Morus genus plants, written by Jie**g Yan, **gya Ruan, Peijian Huang, Fan Sun, Dandan Zheng, Yi Zhang and Tao Wang wa...

    Jie**g Yan, **gya Ruan, Peijian Huang, Fan Sun in Journal of Natural Medicines (2020)

  9. Article

    Open Access

    The structure–activity relationship review of the main bioactive constituents of Morus genus plants

    Morus genus plants are mainly distributed in the temperate to tropical areas over the world and include 17 species and two subspecies. Due to their excellent pharmacological activity, security in food additives a...

    Jie**g Yan, **gya Ruan, Peijian Huang, Fan Sun in Journal of Natural Medicines (2020)

  10. Article

    Open Access

    Dosimetric consequences of image guidance techniques on robust optimized intensity-modulated proton therapy for treatment of breast Cancer

    To investigate the consequences of residual setup error on target dose distribution using various image registration strategies for breast cancer treated with intensity-modulated proton therapy (IMPT).

    **aoying Liang, Raymond B. Mailhot Vega, Zuofeng Li, Dandan Zheng in Radiation Oncology (2020)

  11. Article

    Open Access

    Correlation of dosimetric factors with the development of symptomatic radiation pneumonitis in stereotactic body radiotherapy

    The development of radiation pneumonitis (RP) after Stereotactic Body Radiotherapy (SBRT) is known to be associated with many different factors, although historical analyses of RP have commonly utilized hetero...

    Jeffrey M. Ryckman, Michael Baine, Joseph Carmicheal in Radiation Oncology (2020)

  12. No Access

    Protocol

    EPCES and EPSVR: Prediction of B-Cell Antigenic Epitopes on Protein Surfaces with Conformational Information

    Accurate prediction of discontinuous antigenic epitopes is important for immunologic research and medical applications, but it is not an easy problem. Currently, there are only a few prediction servers availab...

    Shide Liang, Dandan Zheng, Bo Yao, Chi Zhang in Immunoinformatics (2020)

  13. No Access

    Protocol

    SVMTriP: A Method to Predict B-Cell Linear Antigenic Epitopes

    Identifying protein antigenic epitopes recognizable by antibodies is the key step for new immuno-diagnostic reagent discovery and vaccine design. To facilitate this process and improve its efficiency, computat...

    Bo Yao, Dandan Zheng, Shide Liang, Chi Zhang in Immunoinformatics (2020)

  14. Article

    Open Access

    Comparative analysis of rodent and small mammal viromes to better understand the wildlife origin of emerging infectious diseases

    Rodents represent around 43% of all mammalian species, are widely distributed, and are the natural reservoirs of a diverse group of zoonotic viruses, including hantaviruses, Lassa viruses, and tick-borne encep...

    Zhiqiang Wu, Liang Lu, Jiang Du, Li Yang, **anwen Ren, Bo Liu, **yong Jiang in Microbiome (2018)

  15. Article

    Open Access

    Prognostic factors of radiation dermatitis following passive-scattering proton therapy for breast cancer

    To identify prognostic factors for grade 3 radiation dermatitis following passive-scattering proton therapy for breast cancer.

    **aoying Liang, Julie A. Bradley, Dandan Zheng, Michael Rutenberg in Radiation Oncology (2018)

  16. Article

    Open Access

    A comprehensive dosimetric study on switching from a Type-B to a Type-C dose algorithm for modern lung SBRT

    Type-C dose algorithms provide more accurate dosimetry for lung SBRT treatment planning. However, because current dosimetric protocols were developed based on conventional algorithms, its applicability for the...

    Christina Zhou, Nathan Bennion, Rongtao Ma, **aoying Liang, Shuo Wang in Radiation Oncology (2017)

  17. Article

    Open Access

    Target dose conversion modeling from pencil beam (PB) to Monte Carlo (MC) for lung SBRT

    A challenge preventing routine clinical implementation of Monte Carlo (MC)-based lung SBRT is the difficulty of reinterpreting historical outcome data calculated with inaccurate dose algorithms, because the ta...

    Dandan Zheng, **aofeng Zhu, Qinghui Zhang, **aoying Liang in Radiation Oncology (2016)

  18. Article

    Open Access

    A heterozygous moth genome provides insights into herbivory and detoxification

    Minsheng You and colleagues report the whole-genome sequence of the diamondback moth, Plutella xylostella. Their transcriptome analysis from different life stages, together with comparative genomic and phylogenet...

    Minsheng You, Zhen Yue, Weiyi He, **nhua Yang, Guang Yang, Miao **e in Nature Genetics (2013)