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    Article

    Cellular adaptation to cancer therapy along a resistance continuum

    Advancements in precision oncology over the past decades have led to new therapeutic interventions, but the efficacy of such treatments is generally limited by an adaptive process that fosters drug resistance1. I...

    Gustavo S. França, Maayan Baron, Benjamin R. King, Jozef P. Bossowski in Nature (2024)

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    Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment

    Transcriptional heterogeneity among malignant cells of a tumor has been studied in individual cancer types and shown to be organized into cancer cell states; however, it remains unclear to what extent these st...

    Dalia Barkley, Reuben Moncada, Maayan Pour, Deborah A. Liberman in Nature Genetics (2022)

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    Exploring tissue architecture using spatial transcriptomics

    Deciphering the principles and mechanisms by which gene activity orchestrates complex cellular arrangements in multicellular organisms has far-reaching implications for research in the life sciences. Recent te...

    Anjali Rao, Dalia Barkley, Gustavo S. França, Itai Yanai in Nature (2021)

  4. Article

    Author Correction: Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas

    A Correction to this paper has been published: https://doi.org/10.1038/s41587-019-0392-8.

    Reuben Moncada, Dalia Barkley, Florian Wagner, Marta Chiodin in Nature Biotechnology (2020)

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    Article

    Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas

    Single-cell RNA sequencing (scRNA-seq) enables the systematic identification of cell populations in a tissue, but characterizing their spatial organization remains challenging. We combine a microarray-based sp...

    Reuben Moncada, Dalia Barkley, Florian Wagner, Marta Chiodin in Nature Biotechnology (2020)