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    Chapter and Conference Paper

    Pretrained Deep 2.5D Models for Efficient Predictive Modeling from Retinal OCT: A PINNACLE Study Report

    In the field of medical imaging, 3D deep learning models play a crucial role in building powerful predictive models of disease progression. However, the size of these models presents significant challenges, bo...

    Taha Emre, Marzieh Oghbaie, Arunava Chakravarty in Ophthalmic Medical Image Analysis (2023)

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    Chapter and Conference Paper

    TINC: Temporally Informed Non-contrastive Learning for Disease Progression Modeling in Retinal OCT Volumes

    Recent contrastive learning methods achieved state-of-the-art in low label regimes. However, the training requires large batch sizes and heavy augmentations to create multiple views of an image. With non-contr...

    Taha Emre, Arunava Chakravarty in Medical Image Computing and Computer Assis… (2022)

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    Chapter and Conference Paper

    Construction of a Retinal Atlas for Macular OCT Volumes

    Optical Coherence Tomography (OCT) plays an important role in the analysis of retinal diseases such as Age-Related Macular Degeneration (AMD). In this paper, we present a method to construct a normative atlas ...

    Arunava Chakravarty, Divya Jyothi Gaddipati in Image Analysis and Recognition (2018)

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    Chapter and Conference Paper

    End-to-End Learning of a Conditional Random Field for Intra-retinal Layer Segmentation in Optical Coherence Tomography

    Intra-retinal layer segmentation of Optical Coherence Tomography images is critical in the assessment of ocular diseases. Existing Energy minimization based methods employ handcrafted cost terms to define thei...

    Arunava Chakravarty, Jayanthi Sivaswamy in Medical Image Understanding and Analysis (2017)

  5. Chapter and Conference Paper

    Coupled Sparse Dictionary for Depth-Based Cup Segmentation from Single Color Fundus Image

    We present a novel framework for depth based optic cup boundary extraction from a single 2D color fundus photograph per eye. Multiple depth estimates from shading, color and texture gradients in the image are cor...

    Arunava Chakravarty, Jayanthi Sivaswamy in Medical Image Computing and Computer-Assis… (2014)