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  1. Article

    Open Access

    Copy number variants as modifiers of breast cancer risk for BRCA1/BRCA2 pathogenic variant carriers

    The contribution of germline copy number variants (CNVs) to risk of develo** cancer in individuals with pathogenic BRCA1 or BRCA2 variants remains relatively unknown. We conducted the largest genome-wide analys...

    Christopher Hakkaart, John F. Pearson, Louise Marquart in Communications Biology (2022)

  2. Article

    Open Access

    Multi-tissue transcriptome-wide association study identifies eight candidate genes and tissue-specific gene expression underlying endometrial cancer susceptibility

    Genome-wide association studies (GWAS) have revealed sixteen risk loci for endoemtrial cancer but the identification of candidate susceptibility genes remains challenging. Here, we perform transcriptome-wide a...

    Pik Fang Kho, Xuemin Wang, Gabriel Cuéllar-Partida, Thilo Dörk in Communications Biology (2021)

  3. Article

    Open Access

    Assessment of branch point prediction tools to predict physiological branch points and their alteration by variants

    Branch points (BPs) map within short motifs upstream of acceptor splice sites (3’ss) and are essential for splicing of pre-mature mRNA. Several BP-dedicated bioinformatics tools, including HSF, SVM-BPfinder, B...

    Raphaël Leman, Hélène Tubeuf, Sabine Raad, Isabelle Tournier in BMC Genomics (2020)