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Large-scale T-DNA mutagenesis in Arabidopsis for functional genomic analysis

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  1. Article

    Erratum to ES cell neural differentiation reveals a substantial number of novel ESTs

    G. Bain, F. Mansergh, M. Wride, J. Hance, A. Isogawa in Functional & Integrative Genomics (2000)

  2. Article

    Infectomics: genomics and proteomics of microbial infections

    The completion of genomic sequences is the greatest triumph of molecular reductionism since the discovery of the DNA double helix in 1953. However, the utility of reductionism is becoming limited and holistic...

    Sheng-He Huang, Timothy Triche, Ambrose Y. Jong in Functional & Integrative Genomics (2002)

  3. Article

    Global nutritional profiling for mutant and chemical mode-of-action analysis in filamentous fungi

    Matthew M. Tanzer, Herbert N. Arst Jr. in Functional & Integrative Genomics (2004)

  4. Article

    Genetic and in silico comparative map** of the polyphenol oxidase gene in bread wheat (Triticum aestivum L.)

    Rosy Raman, Harsh Raman, Katie Johnstone, Chris Lisle in Functional & Integrative Genomics (2006)

  5. Article

    Empirical Bayes estimation of gene-specific effects in micro-array research

    Jode W. Edwards, Grier P. Page, Gary Gadbury in Functional & Integrative Genomics (2006)

  6. Article

    Ten years of bacterial genome sequencing: comparative-genomics-based discoveries

    It has been more than 10 years since the first bacterial genome sequence was published. Hundreds of bacterial genome sequences are now available for comparative genomics, and searching a given protein against ...

    Tim T. Binnewies, Yair Motro, Peter F. Hallin in Functional & Integrative Genomics (2006)

  7. Protocol

    Application of ProteinChip Array Profiling in Serum Biomarker Discovery for Patients Suffering From Severe Acute Respiratory Syndrome

    A new strain of coronavirus has caused an outbreak of severe acute respiratory syndrome (SARS) from 2002 to 2003 resulting in 774 deaths worldwide. By protein chip array profiling technology, a number of serum...

    Timothy T. C. Yip, William C. S. Cho, Wai Wai Cheng, Johnny W. M. Chan in Microarrays (2007)

  8. Chapter

    Structural Genomics

    Drug discovery based on structural knowledge has proven useful as several structure-based medicines are already on the market. Structural genomics aims at studying a large number of gene products including who...

    Kenneth Lundstrom in Systems Biology (2007)

  9. Article

    Open Access

    Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array

    The increasing amount of available expressed gene sequence data makes whole-transcriptome analysis of certain crop species possible. Potato currently has the second largest number of publicly available express...

    Bjorn Kloosterman, David De Koeyer, Rebecca Griffiths in Functional & Integrative Genomics (2008)

  10. Article

    Diversity of genome research at the 2009 Plant and Animal Genome Conference

    R. Appels in Functional & Integrative Genomics (2009)

  11. Article

    Open Access

    Integration of the barley genetic and seed proteome maps for chromosome 1H, 2H, 3H, 5H and 7H

    Two-dimensional gel electrophoresis was used to screen spring barley cultivars for differences in seed protein profiles. In parallel, 72 microsatellite (simple sequence repeat (SSR)) markers and 11 malting qua...

    Christine Finnie, Merethe Bagge, Torben Steenholdt in Functional & Integrative Genomics (2009)

  12. Article

    Open Access

    Matching the proteome to the genome: the microbody of penicillin-producing Penicillium chrysogenum cells

    In the filamentous fungus Penicillium chrysogenum, microbodies are essential for penicillin biosynthesis. To better understand the role of these organelles in antibiotics production, we determined the matrix enzy...

    Jan A. K. W. Kiel, Marco A. van den Berg in Functional & Integrative Genomics (2009)

  13. Article

    Open Access

    The wheat ω-gliadin genes: structure and EST analysis

    A survey and analysis is made of all available ω-gliadin DNA sequences including ω-gliadin genes within a large genomic clone, previously reported gene sequences, and ESTs identified from the large wheat EST c...

    Olin D. Anderson, Yong Q. Gu, **uying Kong in Functional & Integrative Genomics (2009)

  14. Article

    Open Access

    Microspore embryogenesis: assignment of genes to embryo formation and green vs. albino plant production

    Plant microspores can be reprogrammed from their normal pollen development to an embryogenic route in a process termed microspore embryogenesis or androgenesis. Stress treatment has a critical role in this pro...

    M. Muñoz-Amatriaín, J. T. Svensson, A. M. Castillo in Functional & Integrative Genomics (2009)

  15. Chapter

    Erratum to: Functional Modules in Protein–Protein Interaction Networks

    Tobias Müller, Marcus Dittrich in Systems Biology for Signaling Networks (2010)

  16. Article

    Open Access

    Conserved synteny at the protein family level reveals genes underlying Shewanella species’ cold tolerance and predicts their novel phenotypes

    Bacteria of the genus Shewanella can thrive in different environments and demonstrate significant variability in their metabolic and ecophysiological capabilities including cold and salt tolerance. Genomic charac...

    Tatiana V. Karpinets, Anna Y. Obraztsova, Yanbing Wang in Functional & Integrative Genomics (2010)

  17. Article

    Open Access

    Duplication of a well-conserved homeodomain-leucine zipper transcription factor gene in barley generates a copy with more specific functions

    Three spikelets are formed at each rachis node of the cultivated barley (Hordeum vulgare ssp. vulgare) spike. In two-rowed barley, the central one is fertile and the two lateral ones are sterile, whereas in the s...

    Shun Sakuma, Mohammad Pourkheirandish in Functional & Integrative Genomics (2010)

  18. Article

    Open Access

    Control of flowering time and spike development in cereals: the earliness per se Eps-1 region in wheat, rice, and Brachypodium

    The earliness per se gene Eps-A m 1 from diploid wheat Triticum monococcum affects heading time, spike development, and spikelet...

    Maria E. Faricelli, Miroslav Valárik, Jorge Dubcovsky in Functional & Integrative Genomics (2010)

  19. Article

    Open Access

    Inducing chromosome pairing through premature condensation: analysis of wheat interspecific hybrids

    At the onset of meiosis, chromosomes first decondense and then condense as the process of recognition and intimate pairing occurs between homologous chromosomes. We show here that okadaic acid, a drug known to...

    Emilie Knight, Emma Greer, Tracie Draeger, Vera Thole in Functional & Integrative Genomics (2010)

  20. Article

    Open Access

    Skeletal muscle specific genes networks in cattle

    While physiological differences across skeletal muscles have been described, the differential gene expression underlying them and the discovery of how they interact to perform specific biological processes are...

    Natalia Moreno-Sánchez, Julia Rueda, María J. Carabaño in Functional & Integrative Genomics (2010)

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