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  1. Article

    Open Access

    Integrated machine learning algorithms reveal a bone metastasis-related signature of circulating tumor cells in prostate cancer

    Bone metastasis is an essential factor affecting the prognosis of prostate cancer (PCa), and circulating tumor cells (CTCs) are closely related to distant tumor metastasis. Here, the protein-protein interactio...

    Congzhe Ren, **angyu Chen, Xuexue Hao, Changgui Wu, Lijun **e in Scientific Data (2024)

  2. No Access

    Article

    A non-invasive artificial intelligence model for identifying axillary pathological complete response to neoadjuvant chemotherapy in breast cancer: a secondary analysis to multicenter clinical trial

    This study aims to develop a stacking model for accurately predicting axillary lymph node (ALN) response to neoadjuvant chemotherapy (NAC) using longitudinal MRI in breast cancer.

    Teng Zhu, Yu-Hong Huang, Wei Li, Can-Gui Wu, Yi-Min Zhang in British Journal of Cancer (2024)

  3. No Access

    Article

    A recursive construction of doubly resolvable Steiner quadruple systems

    Two resolutions of the same 3-design are said to be orthogonal when each parallel class of one resolution has at most one block in common with each parallel class of the other resolution. If a Steiner quadrupl...

    Zhao** Meng, Qingling Gao, Zhanggui Wu in Designs, Codes and Cryptography (2024)

  4. Article

    Open Access

    Simultaneous single-cell three-dimensional genome and gene expression profiling uncovers dynamic enhancer connectivity underlying olfactory receptor choice

    The simultaneous measurement of three-dimensional (3D) genome structure and gene expression of individual cells is critical for understanding a genome’s structure–function relationship, yet this is challenging...

    Honggui Wu, Jiankun Zhang, Fanchong Jian, **xin Phaedo Chen in Nature Methods (2024)

  5. No Access

    Article

    Role of miRNAs in macrophage-mediated kidney injury

    Macrophages, crucial components of the human immune system, can be polarized into M1/M2 phenotypes, each with distinct functions and roles. Macrophage polarization has been reported to be significantly involve...

    Junxin Li, **da Yan, Zhigui Wu, **g Shen, Yalin Li, Yueshui Zhao in Pediatric Nephrology (2024)

  6. Article

    Open Access

    DDX5 inhibits hyaline cartilage fibrosis and degradation in osteoarthritis via alternative splicing and G-quadruplex unwinding

    Hyaline cartilage fibrosis is typically considered an end-stage pathology of osteoarthritis (OA), which results in changes to the extracellular matrix. However, the mechanism behind this is largely unclear. He...

    Qianqian Liu, Mingrui Han, Zhigui Wu, Wenqiang Fu, Jun Ji, Qingqing Liang in Nature Aging (2024)

  7. Article

    Open Access

    Author Correction: scCircle-seq unveils the diversity and complexity of extrachromosomal circular DNAs in single cells

    **xin Phaedo Chen, Constantin Diekmann, Honggui Wu, Chong Chen in Nature Communications (2024)

  8. No Access

    Article

    Analysis of the Cadmium Removal Mechanism of Human Gut Bacteria Enterococcus faecalis Strain ATCC19433 from a Genomic Perspective

    Cadmium (Cd) is one of the most well-known toxic metals capable of entering the human body via the food chain, leading to serious health problems. Human gut microbes play a pivotal role in controlling Cd bioav...

    Yu Zheng, Zhibin Duan, Yonggui Wu, Yang Luo in Biological Trace Element Research (2024)

  9. No Access

    Article

    Synthesis of multicolor fluorescent CDs from natural plant kaempferide and their application in anti-counterfeiting inks

    Carbon dots (CDs) are versatile nanomaterials with tunable luminescent properties. We used a natural plant kaempferol as a carbon source to synthesize multicolor CDs by reacting it with various nitrogen source...

    Lin** Ma, **ang Long, Yanshun Ma, Shaogui Wu in Carbon Letters (2024)

  10. Article

    Open Access

    Expression of USP25 associates with fibrosis, inflammation and metabolism changes in IgG4-related disease

    IgG4-related disease (IgG4-RD) has complex clinical manifestations ranging from fibrosis and inflammation to deregulated metabolism. The molecular mechanisms underpinning these phenotypes are unclear. In this ...

    Panpan Jiang, Yukai **g, Siyu Zhao, Caini Lan, Lu Yang, **n Dai in Nature Communications (2024)

  11. No Access

    Article

    One-pot Synthesis of High-performance Green-emitting Carbon Dots for Cd2+ Sensing and Anti-counterfeiting Applications

    This study presents a facile one-pot solvothermal synthesis of high-performance green fluorescent carbon dots (G-CDs) using o-phenylenediamine and ethylenediamine as precursors. The G-CDs show excellent optica...

    Shihua Liao, Jiamei **ang, Shaogui Wu in Journal of Fluorescence (2024)

  12. Article

    Open Access

    Canopy gap impacts on soil organic carbon and nutrient dynamic: a meta-analysis

    The forest canopy gaps, formed by natural or anthropogenic factors, have been found to reduce soil carbon content and increase nutrient availability. The magnitudes of these effects have been observed to incre...

    Ran Tong, Biyong Ji, G. Geoff Wang, Chenyang Lou, Cong Ma in Annals of Forest Science (2024)

  13. Article

    Open Access

    scCircle-seq unveils the diversity and complexity of extrachromosomal circular DNAs in single cells

    Extrachromosomal circular DNAs (eccDNAs) have emerged as important intra-cellular mobile genetic elements that affect gene copy number and exert in trans regulatory roles within the cell nucleus. Here, we desc...

    **xin Phaedo Chen, Constantin Diekmann, Honggui Wu, Chong Chen in Nature Communications (2024)

  14. Article

    Open Access

    Construction and evaluation of immune-related diagnostic model in patients with heart failure caused by idiopathic dilated cardiomyopathy

    The purpose of the study was to construct the potential diagnostic model of immune-related genes during the development of heart failure caused by idiopathic dilated cardiomyopathy.

    Sichi Xu, Zhaogui Wu, Haihua Chen in BMC Cardiovascular Disorders (2024)

  15. No Access

    Article

    Risk and effect modifiers for poor glycemic control among the chinese diabetic adults on statin therapy: the kailuan study

    Limited studies have investigated the association between statin therapy and poor glycemic control, especially in the Chinese diabetic population.

    Zhaogui Wu, Shuohua Chen, **xi Tao, Hangkuan Liu in Clinical Research in Cardiology (2024)

  16. Article

    Open Access

    Fibroblasts inhibit osteogenesis by regulating nuclear-cytoplasmic shuttling of YAP in mesenchymal stem cells and secreting DKK1

    Fibrous scars frequently form at the sites of bone nonunion when attempts to repair bone fractures have failed. However, the detailed mechanism by which fibroblasts, which are the main components of fibrous sc...

    Fei Huang, Guozhen Wei, Hai Wang, Ying Zhang, Wenbin Lan, Yun **e in Biological Research (2024)

  17. No Access

    Chapter and Conference Paper

    Analysis of Non-intellectual Factors Affecting K-12 Student Academic Performance Using the Random Forest Model

    Objective: A random forest algorithm was used to analyze non-intellectual factors that directly affect student achievement at the K-12 level and provide targeted strategies for addressing these factors. Method...

    Jimin Pu, Linxuan Du, Guigui Wu in Proceedings of the 2nd International Confe… (2024)

  18. Article

    Open Access

    Correlation between gut microbiome and cognitive impairment in patients undergoing peritoneal dialysis

    Growing evidence has demonstrated that patients undergoing peritoneal dialysis (PD) are more likely to experience cognitive impairment than patients with non-dialysis end-stage renal disease (ESRD); however, t...

    **g**g Wang, Siyang Wu, ** Zhang, Yuanyuan Li, Yonggui Wu in BMC Nephrology (2023)

  19. No Access

    Article

    Effects of Different Conditioners on Humus Composition and Humic Acid Structural Characteristics in Black Soil Under the Combined Application of Pig Manure and Straw

    The objective of this study was to assess the changes in the composition and structure of humic acid (HA) following the application of different conditioners in combination with manure and straw. The experimen...

    Shuang Zheng, **g-Gui Wu, **-Rong Li in Journal of Soil Science and Plant Nutrition (2023)

  20. No Access

    Article

    Short-term changes in soil labile carbon and nitrogen pools with biochar application in a suburban native forest in subtropical Australia

    Soil labile carbon (C) and nitrogen (N) pools are vital indicators of soil fertility and soil organic matter (SOM) dynamics. We aimed to evaluate the short-term effects of biochar application on soil labile C ...

    Jia** Yang, Juan Zhan, Sabah Taresh, Weiling Sun in Journal of Soils and Sediments (2023)

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