Skip to main content

and
  1. Article

    Open Access

    TFvelo: gene regulation inspired RNA velocity estimation

    RNA velocity is closely related with cell fate and is an important indicator for the prediction of cell states with elegant physical explanation derived from single-cell RNA-seq data. Most existing RNA velocit...

    Jiachen Li, **aoyong Pan, Ye Yuan, Hong-Bin Shen in Nature Communications (2024)

  2. Article

    Open Access

    ZeroBind: a protein-specific zero-shot predictor with subgraph matching for drug-target interactions

    Existing drug-target interaction (DTI) prediction methods generally fail to generalize well to novel (unseen) proteins and drugs. In this study, we propose a protein-specific meta-learning framework ZeroBind w...

    Yuxuan Wang, Ying **a, Junchi Yan, Ye Yuan, Hong-Bin Shen in Nature Communications (2023)

  3. Article

    Open Access

    Observation of aggregation triggered by Resonance Energy Transfer (RET) induced intermolecular pairing force

    In this report, we showed the existence of RET induced intermolecular pairing force by comparing their fluorescence behaviors under room illumination vs standing in dark area for either PFluAnt solution or PFluAn...

    **aoyong Pan, Weizhi Wang, Lin Ke, Nan Zhang in Scientific Reports (2017)

  4. No Access

    Article

    OUGENE: a disease associated over-expressed and under-expressed gene database

    Gene over-expression or under-expression is closely associated with human diseases, which contributes to phenotypic variations and diversity. To our best knowledge, there is no single open specific resource a...

    **aoyong Pan, Hong-Bin Shen in Science Bulletin (2016)

  5. Article

    Open Access

    Photoluminescence from Amino-Containing Polymer in the Presence of CO2: Carbamato Anion Formed as a Fluorophore

    Organic photoluminescent materials are important to many applications especially for diagnosis and detection and most of organic photoluminescent materials contain fluorophores with extended conjugated structu...

    **aoyong Pan, Guan Wang, Chee Leng Lay, Beng Hong Tan, Chaobin He in Scientific Reports (2013)