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    Protocol

    Mining Biomedical Data Using MetaMap Transfer (MMTx) and the Unified Medical Language System (UMLS)

    Detailed instruction is described for map** unstructured, free text data into common biomedical concepts (drugs, diseases, anatomy, and so on) found in the Unified Medical Language System using MetaMap Trans...

    John D. Osborne, Simon Lin, Lihua Julie Zhu, Warren A. Kibbe in Gene Function Analysis (2007)

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    Protocol

    Interpreting Microarray Results With Gene Ontology and MeSH

    Methods are described to take a list of genes generated from a microarray experiment and interpret these results using various tools and ontologies. A workflow is described that details how to convert gene ide...

    John D. Osborne, Lihua (Julie) Zhu, Simon M. Lin in Microarray Data Analysis (2007)