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    Protocol

    Confounding in Genetic Association Studies and Its Solutions

    An association study can be used to investigate how individuals with unique genetic variants respond to a drug treatment. In an association study, individuals may come from different ethnic groups or an admixe...

    Donglei Hu, Elad Ziv in Pharmacogenomics in Drug Discovery and Development (2008)

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    Protocol

    Pharmacogenomics of Drug-Metabolizing Enzymes and Drug Transporters in Chemotherapy

    There is wide variability in the response of individuals to standard doses of drug therapy. This is an important problem in clinical practice, where it can lead to therapeutic failures or adverse drug events. ...

    Tessa M. Bosch in Pharmacogenomics in Drug Discovery and Development (2008)

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    Protocol

    G Protein-Coupled Receptors Disrupted in Human Genetic Disease

    Genetic variation in G protein-coupled receptors (GPCRs) results in the disruption of GPCR function in a wide variety of human genetic diseases. In vitro strategies have been used to elucidate the molecular pa...

    Miles D. Thompson, Maire E. Percy in Pharmacogenomics in Drug Discovery and Dev… (2008)

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    Protocol

    Pharmacogenetics of Asthma

    Asthma is a common disease characterized by airway inflammation and bronchorestriction. There are several common categories of medications for treating asthma; however, not all asthmatics have the same respons...

    Gregory A. Hawkins, Stephen P. Peters in Pharmacogenomics in Drug Discovery and Development (2008)

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    Protocol

    Epigenetic Alterations of the Dopaminergic System in Major Psychiatric Disorders

    Although there is evidence to link schizophrenia (SCZ) and bipolar disorder (BD) to genetic and environmental factors, specific individual or groups of genes/factors causative of the disease have been elusive ...

    Hamid Mostafavi Abdolmaleky in Pharmacogenomics in Drug Discovery and Dev… (2008)

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    Protocol

    Pharmacogenomics in Gastrointestinal Disorders

    It is anticipated that unraveling the human genome will have a direct impact on the management of specific diseases. Variations or mutations in genes involved in drug metabolism or disease pathophysiology in g...

    Michael Camilleri, Yuri A. Saito in Pharmacogenomics in Drug Discovery and Development (2008)

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    Protocol

    Cancer Pharmacogenetics

    Cancer pharmacogenetics is a burgeoning field. There are now many published associations between genotype and outcome or toxicity from chemotherapy treatment. Performing pharmacogenetics studies in cancer requ...

    Sharon Marsh in Pharmacogenomics in Drug Discovery and Development (2008)

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    Pharmacogenomics in the Evaluation of Efficacy and Adverse Events During Clinical Development of Vaccines

    The understanding of vaccine-induced immune responses in adults and infants is limited. Current vaccination schedules for infants are frequently debated. Especially, the relationship among the timing, the freq...

    Lennart J. Nilsson in Pharmacogenomics in Drug Discovery and Development (2008)

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    Protocol

    Applications of Microarrays and Biochips in Pharmacogenomics

    The complete sequence of the human genome and subsequent intensive searches for polymorphic variations are providing the prerequisite markers necessary to facilitate elucidation of the genetic variability in d...

    Gary Hardiman in Pharmacogenomics in Drug Discovery and Development (2008)

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    Pharmacogenetics of Membrane Transporters

    This chapter provides a review of the pharmacogenetics of mem brane transporters, including adenosine triphosphate-binding cassette (ABC) transporters and organic anion transporting proteins (OATPs). Membrane ...

    Tristan M. Sissung, Erin R. Gardner, Rui Gao in Pharmacogenomics in Drug Discovery and Dev… (2008)

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    Pharmacogenomics of G Protein-Coupled Receptor

    The identification and characterization of the processes of G protein-coupled receptor (GPCR) activation and inactivation have refined not only the study of the GPCRs but also the genomics of many accessory pr...

    Miles D. Thompson, David E. C. Cole in Pharmacogenomics in Drug Discovery and Dev… (2008)

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    Pharmacogenomics in Alzheimer's Disease

    Pharmacological treatment in Alzheimer's disease (AD) accounts for 10–20% of direct costs, and fewer than 20% of AD patients are moderate responders to conventional drugs (donepezil, rivastigmine, galantamine,...

    Ramón Cacabelos in Pharmacogenomics in Drug Discovery and Development (2008)

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    G Protein-Coupled Receptor Pharmacogenetics

    Common G protein-coupled receptor (GPCR) gene variants that encode receptor proteins with a distinct sequence may alter drug efficacy without always resulting in a disease phenotype. GPCR genetic loci harbor n...

    Miles D. Thompson, Katherine A. Siminovitch in Pharmacogenomics in Drug Discovery and Dev… (2008)

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    Protocol

    From SNPs to Functional Studies in Cardiovascular Pharmacogenomics

    Functional studies can be utilized to give importance/relevance to clinical associations. Once a clinical genetic or pharmacogenetic association is found, molecular studies can be utilized to explore the mecha...

    Sharon Cresci in Pharmacogenomics in Drug Discovery and Development (2008)

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    Pharmacogenomics in Rheumatoid Arthritis

    Rheumatoid arthritis (RA) is a systemic inflammatory arthritis that leads to severe joint damage and is associated with high morbidity and mortality. Disease-modifying antirheumatic drugs (DMARDs) are the main...

    Prabha Ranganathan in Pharmacogenomics in Drug Discovery and Development (2008)

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    Pharmacogenomics in the Preclinical Development of Vaccines

    The development of vaccines, conventional protein based as well as nucleic acid based vaccines, and their delivery systems has been largely empirical and ineffective. This is partly due to a lack of methodolog...

    Karin J. Regnström in Pharmacogenomics in Drug Discovery and Development (2008)

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    The Integration of Personalized and Systems Medicine

    Pharmacogenomics may have a deep impact on every drug treatment protocol to bring the right drug to the right patient. While pharmacogenomics can help achieve individualized medicine, the study of systems biol...

    Qing Yan in Pharmacogenomics in Drug Discovery and Development (2008)

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    Protocol

    Molecular Detection of Ralstonia solanacearum to Facilitate Breeding for Resistance to Bacterial Wilt in Potato

    Potato bacterial wilt is caused by the devastating bacterial pathogen Ralstonia solanacearum. Quantitative resistance to this disease has been and is currently introgressed from a number of wild relatives into cu...

    Virginia Ferreira, Matías González, María Julia Pianzzola in Solanum tuberosum (2021)

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    Data Processing and Analysis for DIA-Based Phosphoproteomics Using Spectronaut

    Data-independent acquisition (DIA) for liquid chromatography tandem mass spectrometry (LC-MS/MS) can improve the depth and reproducibility of the acquired proteomics datasets. DIA solves some limitations of th...

    Ana Martinez-Val, Dorte Breinholdt Bekker-Jensen in Proteomics Data Analysis (2021)

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    A Comprehensive Guide to Potato Transcriptome Assembly

    We have witnessed a rapid advancement in high-throughput genome sequencing and the maturation of long-read technologies. However, an accurate assembly of polyploid potato genomes still remains challenging. Seq...

    Maja Zagorščak, Marko Petek in Solanum tuberosum (2021)

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