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    Chapter and Conference Paper

    An Agglomerate Algorithm for Mining Overlap** and Hierarchical Functional Modules in Protein Interaction Networks

    Real PPI networks commonly have large size. Functional modules in them are usually overlap** and hierarchical. So it is significant to identify both overlap** and hierarchical modules with low time complex...

    Jun Ren, Jianxin Wang, Jianâer Chen, Min Li… in Bioinformatics Research and Applications (2010)

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    Chapter and Conference Paper

    Deciphering Transcription Factor Binding Patterns from Genome-Wide High Density ChIP-chip Tiling Array Data

    The binding events of DNA-binding proteins can be extensively characterized by high density ChIP-chip tiling array data. The binding sites and binding occupancy patterns are all very useful to understand the D...

    Juntao Li, Lei Zhu, Majid Eshaghi, Jianhua Liu… in Bioinformatics Research and Applications (2010)

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    Chapter and Conference Paper

    Essential Proteins Discovery from Weighted Protein Interaction Networks

    Identifying essential proteins is important for understanding the minimal requirements for cellular survival and development. Fast growth in the amount of available protein-protein interactions has produced un...

    Min Li, Jianxin Wang, Huan Wang, Yi Pan in Bioinformatics Research and Applications (2010)