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  1. Article

    Open Access

    Curated compendium of human transcriptional biomarker data

    One important use of genome-wide transcriptional profiles is to identify relationships between transcription levels and patient outcomes. These translational insights can guide the development of biomarkers fo...

    Nathan P. Golightly, Avery Bell, Anna I. Bischoff in Scientific Data (2018)

  2. Article

    Open Access

    Publisher Correction: Combating subclonal evolution of resistant cancer phenotypes

    The originally published version of this Article contained an error in Figure 4. In panel a, grey boxes surrounding the subclones associated with patients #2 and #4 obscured adjacent portions of the heatmap. T...

    Samuel W. Brady, Jasmine A. McQuerry, Yi Qiao, Stephen R. Piccolo in Nature Communications (2018)

  3. Article

    Open Access

    Combating subclonal evolution of resistant cancer phenotypes

    Metastatic breast cancer remains challenging to treat, and most patients ultimately progress on therapy. This acquired drug resistance is largely due to drug-refractory sub-populations (subclones) within heter...

    Samuel W. Brady, Jasmine A. McQuerry, Yi Qiao, Stephen R. Piccolo in Nature Communications (2017)

  4. Article

    Open Access

    A cloud-based workflow to quantify transcript-expression levels in public cancer compendia

    Public compendia of sequencing data are now measured in petabytes. Accordingly, it is infeasible for researchers to transfer these data to local computers. Recently, the National Cancer Institute began explori...

    PJ Tatlow, Stephen R. Piccolo in Scientific Reports (2016)