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  1. Article

    Open Access

    Dandelion uses the single-cell adaptive immune receptor repertoire to explore lymphocyte developmental origins

    Assessment of single-cell gene expression (single-cell RNA sequencing) and adaptive immune receptor (AIR) sequencing (scVDJ-seq) has been invaluable in studying lymphocyte biology. Here we introduce Dandelion,...

    Chenqu Suo, Krzysztof Polanski, Emma Dann, Rik G. H. Lindeboom in Nature Biotechnology (2024)

  2. No Access

    Article

    Single-cell omics meets organoid cultures

    Roser Vento-Tormo highlights the synergy of single-cell omics and organoids by Camp et al., who used single-cell RNA sequencing to characterize the cell–cell communication events driving tissue formation in hu...

    Roser Vento-Tormo in Nature Reviews Genetics (2023)

  3. Article

    Open Access

    Author Correction: Map** the temporal and spatial dynamics of the human endometrium in vivo and in vitro

    Luz Garcia-Alonso, Louis-François Handfield, Kenny Roberts in Nature Genetics (2023)

  4. No Access

    Article

    Cell2location maps fine-grained cell types in spatial transcriptomics

    Spatial transcriptomic technologies promise to resolve cellular wiring diagrams of tissues in health and disease, but comprehensive map** of cell types in situ remains a challenge. Here we present сell2locat...

    Vitalii Kleshchevnikov, Artem Shmatko, Emma Dann in Nature Biotechnology (2022)

  5. Article

    Open Access

    Map** the temporal and spatial dynamics of the human endometrium in vivo and in vitro

    The endometrium, the mucosal lining of the uterus, undergoes dynamic changes throughout the menstrual cycle in response to ovarian hormones. We have generated dense single-cell and spatial reference maps of th...

    Luz Garcia-Alonso, Louis-François Handfield, Kenny Roberts in Nature Genetics (2021)

  6. No Access

    Article

    A cellular census of human lungs identifies novel cell states in health and in asthma

    Human lungs enable efficient gas exchange and form an interface with the environment, which depends on mucosal immunity for protection against infectious agents. Tightly controlled interactions between structu...

    Felipe A. Vieira Braga, Gozde Kar, Marijn Berg, Orestes A. Carpaij in Nature Medicine (2019)

  7. No Access

    Article

    Epigenetic control of myeloid cell differentiation, identity and function

  8. The interplay between transcription factors and epigenetic regulators is crucial for regulating gene-expression programmes during haematopoiesis. Epigenetic re...

  9. Damiana Álvarez-Errico, Roser Vento-Tormo, Michael Sieweke in Nature Reviews Immunology (2015)