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The Plasmodesmal Protein OsGER4 is Involved in Auxin Mediated Crown Root Development in Rice

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  1. Article

    Open Access

    Contribution of RdDM to the ecotype-specific differential methylation on conserved as well as highly variable regions between Arabidopsis ecotypes

    Several studies showed genome-wide DNA methylation during Arabidopsis embryogenesis and germination. Although it has been known that the change of DNA methylation mainly occurs at CHH context mediated by small RN...

    Jaehoon Lee, Sang-Yoon Shin, Sang-Kyu Lee, Kyunghyuk Park, Haechan Gill in BMC Genomics (2023)

  2. Article

    Open Access

    Development of a Temperate Climate-Adapted indica Multi-stress Tolerant Rice Variety by Pyramiding Quantitative Trait Loci

    Successful cultivation of rice (Oryza sativa L.) in many Asian countries requires submergence stress tolerance at the germination and early establishment stages. Two quantitative trait loci, Sub1 (conferring subm...

    Na-Hyun Shin, Jae-Hyuk Han, Kieu Thi Xuan Vo, Jeonghwan Seo, Ian Paul Navea in Rice (2022)

  3. Article

    Open Access

    Proteomics and Metabolomics Studies on the Biotic Stress Responses of Rice: an Update

    Biotic stresses represent a serious threat to rice production to meet global food demand and thus pose a major challenge for scientists, who need to understand the intricate defense mechanisms. Proteomics and ...

    Kieu Thi Xuan Vo, Md Mizanor Rahman, Md Mustafizur Rahman, Kieu Thi Thuy Trinh in Rice (2021)

  4. Article

    Open Access

    Rice protein-binding microarrays: a tool to detect cis-acting elements near promoter regions in rice

    The present study showed that a rice (Oryza sativa)-specific protein-binding microarray (RPBM) can be applied to analyze DNA-binding motifs with a TF where binding is evaluated in extended natural promoter region...

    Joung Sug Kim, SongHwa Chae, Kyong Mi Jun, Gang-Seob Lee, Jong-Seong Jeon in Planta (2021)

  5. Article

    Open Access

    Two nuclear effectors of the rice blast fungus modulate host immunity via transcriptional reprogramming

    Pathogens utilize multiple types of effectors to modulate plant immunity. Although many apoplastic and cytoplasmic effectors have been reported, nuclear effectors have not been well characterized in fungal pat...

    Seongbeom Kim, Chi-Yeol Kim, Sook-Young Park, Ki-Tae Kim in Nature Communications (2020)

  6. Article

    Open Access

    Natural variations at the Stay-Green gene promoter control lifespan and yield in rice cultivars

    Increased grain yield will be critical to meet the growing demand for food, and could be achieved by delaying crop senescence. Here, via quantitative trait locus (QTL) map**, we uncover the genetic basis und...

    Dong** Shin, Sichul Lee, Tae-Heon Kim, Jong-Hee Lee in Nature Communications (2020)

  7. Article

    Open Access

    OsbHLH058 and OsbHLH059 transcription factors positively regulate iron deficiency responses in rice

    Subgroup IVc basic helix-loop-helix transcription factors OsbHLH058 and OsbHLH059 positively regulate major iron deficiency responses in rice in a similar but distinct manner, putatively under partial control ...

    Takanori Kobayashi, Asami Ozu, Subaru Kobayashi, Gynheung An in Plant Molecular Biology (2019)

  8. Article

    Erratum to: Defense Response to Pathogens Through Epigenetic Regulation in Rice

    In the original publication, a statement of equal contribution was not included. The text should read as: Trung Viet Hoang and Kieu Thi Xuan Vo contributed equally to this work.

    Trung Viet Hoang, Kieu Thi Xuan Vo, Woo-Jong Hong, Ki-Hong Jung in Journal of Plant Biology (2018)

  9. Article

    Open Access

    Crosstalk between diurnal rhythm and water stress reveals an altered primary carbon flux into soluble sugars in drought-treated rice leaves

    Plants retain rhythmic physiological responses when adapting to environmental challenges. However, possible integrations between drought conditions and those responses have not received much focus, especially ...

    Seo-Woo Kim, Sang-Kyu Lee, Hee-Jeong Jeong, Gynheung An in Scientific Reports (2017)

  10. Article

    Differential role for BiP3 in rice immune receptor-mediated resistance

    Endoplasmic reticulum-bound chaperone luminal-binding protein 3 (BiP3) has been found to regulate the immunity mediated by the membrane-bound extracellular immune receptors Xa3/Xa26 and Xa21, that encode non-argi...

    Chi-Yeol Kim, Muho Han, Chang-** Park in Journal of the Korean Society for Applied … (2014)

  11. Article

    Open Access

    Transcriptome analysis of leaf and root of rice seedling to acute dehydration

    Water deficiency is one of the most serious worldwide problems for agriculture. Recently, it has become more serious and outspread, which urgently requires the production of drought-tolerant plants. Microarray...

    Pham-Thi Minh-Thu, Duk-Ju Hwang, Jong-Seong Jeon, Baek Hie Nahm, Yeon-Ki Kim in Rice (2013)

  12. Article

    Open Access

    FSTVAL: a new web tool to validate bulk flanking sequence tags

    Information about a transgene locus is one of the major concerns in transgenic research because expression of the transgene or a gene interrupted by the integration event could be affected. Thus, the flanking ...

    Joung Sug Kim, Jiye Kim, Tae-Ho Lee, Kyong Mi Jun, Tea Hoon Kim in Plant Methods (2012)

  13. Article

    Open Access

    Genetic and Molecular Insights into the Enhancement of Rice Yield Potential

    Rice is one of the most important global food crops and a primary source of calories for more than half of the world's population. Rice production increased steadily during the green revolution era primarily a...

    Jong-Seong Jeon, Ki-Hong Jung, Hyun-Bi Kim, Jung-Pil Suh in Journal of Plant Biology (2011)