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Article
Identification and expression analysis of XIP gene family members in rice
Xylanase inhibitor proteins (XIP) are widely distributed in the plant kingdom, and also exist in rice. However, a systematic bioinformatics analysis of this gene family in rice (OsXIP) has not been conducted to d...
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Article
Open AccessGenome-wide identification, characterization and expression of C2H2 zinc finger gene family in Opisthopappus species under salt stress
The C2H2 zinc finger protein family plays important roles in plants. However, precisely how C2H2s function in Opisthopappus (Opisthopappus taihangensis and Opisthopappus longilobus) remains unclear.
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Article
Geographic distribution pattern and ecological niche differentiation of endangered Opisthopappus in Taihang Mountains
Environmental changes could dramatically affect biodiversity and the distribution of species. Predicting and understanding the dynamics of vegetation distribution can provide valuable insights into ecosystems’...
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Article
N6-Methyladenosine and physiological response divergence confer autotetraploid enhanced salt tolerance compared to its diploid Hordeum bulbosum
Polyploid species have played an essential role in plant evolution, exemplified by adaptive advantages to abiotic stress. N6-Methyladenosine (m6A) is suggested to play an important role in stress response. Howeve...
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Article
N6-Methyladenosine dynamic changes and differential methylation in wheat grain development
More methylation changes occur in late interval than in early interval of wheat seed development with protein and the starch synthesis-related pathway enriched in the later stages.
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Article
Cloning, expression analysis and molecular marker development of cinnamyl alcohol dehydrogenase gene in common wheat
In common wheat, stem strength is one of the key factors for lodging resistance, which is influenced by lignin content. Cinnamyl alcohol dehydrogenase (CAD) is a vital enzyme in the pathway of lignin biosynthe...
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Article
Open AccessLocalized environmental heterogeneity drives the population differentiation of two endangered and endemic Opisthopappus Shih species
Climate heterogeneity not only indirectly shapes the genetic structures of plant populations, but also drives adaptive divergence by impacting demographic dynamics. The variable localized climates and topograp...
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Article
MiR396 regulatory network and its expression during grain development in wheat
Wheat contains the largest number of miR396 family with 17 miR396 in Poaceae. MiR396 regulatory network underlying wheat grain development has not comprehensively been explored. Our results showed that precursor ...
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Article
Open AccessDemographic history and genetic differentiation of an endemic and endangered Ulmus lamellosa (Ulmus)
Ulmus lamellosa (one of the ancient species of Ulmus) is an endemic and endangered plant that has undergone climatic oscillations and geographical changes. The elucidation of its demographic history and genetic d...
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Article
Physiological and transcriptional response to heat stress in heat-resistant and heat-sensitive maize (Zea mays L.) inbred lines at seedling stage
To understand the molecular and physiological mechanism underlying the heat stress in maize, transcriptional and physiological response to heat stress in the heat-resistant Huangzaosi (HZS) and heat-sensitive ...
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Article
MicroRNA-mediated responses to colchicine treatment in barley
In Hordeum vulgare, nine differentially expressed novel miRNAs were induced by colchicine. Five novel miRNA in colchicine solution showed the opposite expression patterns as those in water.
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Article
Open AccessGenome constitution and evolution of Elytrigia lolioides inferred from Acc1, EF-G, ITS, TrnL-F sequences and GISH
Elytrigia lolioides (Kar. et Kir.) Nevski, which is a perennial, cross-pollinating wheatgrass that is distributed in Russia and Kazakhstan, is classified into Elytrigia, Elymus, and Lophopyrum genera by taxonomis...
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Article
Open AccessTranscriptome analysis reveals new microRNAs-mediated pathway involved in anther development in male sterile wheat
337S is a novel bi-pole-photo-thermo-sensitive genic male sterile line in wheat, and sensitive to both long day length/high temperature and short day length/low temperature condition. Although the regulatory f...
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Article
Open AccessDetection of QTLs for seedling characteristics in barley (Hordeum vulgare L.) grown under hydroponic culture condition
Seedling characteristics play significant roles in the growth and development of barley (Hordeum vulgare L.), including stable stand establishment, water and nutrients uptake, biotic resistance and abiotic stress...
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Article
Open AccessQTL underlying some agronomic traits in barley detected by SNP markers
Increasing the yield of barley (Hordeum vulgare L.) is a main breeding goal in develo** barley cultivars. A high density genetic linkage map containing 1894 SNP and 68 SSR markers covering 1375.8 cM was constru...
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Article
Open AccessIdentification of QTL underlying physiological and morphological traits of flag leaf in barley
Physiological and morphological traits of flag leaf play important roles in determining crop grain yield and biomass. In order to understand genetic basis controlling physiological and morphological traits of ...
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Article
Evolution and association analysis of GmCYP78A10 gene with seed size/weight and pod number in soybean
Seed-size/weight traits, controlled by multiple genes in soybean, play an important role in determining seed yield. However, the molecular mechanisms controlling the seed size and weight in soybean remain uncl...
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Article
Effects of nitrogen spraying on the post-anthesis stage of winter wheat under waterlogging stress
Waterlogging is a main stress factor during the late growing stage of winter wheat (Triticum aestivum L.) in the southern Huanghuai and Yangtze Valley regions of China. The effects of nitrogen spraying on post-an...
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Article
Cloning of genome-specific repetitive DNA sequences in wild rice (O. rufipogon Griff.), and the development of Ty3-gypsy retrotransposon-based SSAP marker for distinguishing rice (O. sativa L.) indica and japonica subspecies
In the rice genome, insertions and eliminations of transposable elements have generated numerous transposon insertion polymorphisms (TIPs). Common wild rice (O. rufipogon Griff.), the ancestor of Asian cultivated...
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Article
Molecular diversity and association map** of quantitative traits in Tibetan wild and worldwide originated barley (Hordeum vulgare L.) germplasm
Molecular diversity of 40 accessions of Tibetan wild barley (TB), 10 Syrian (SY), 72 North American (NA), 36 European (EU), 9 South American (SA) and 8 Australian (AU) varieties were characterized using multip...