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  1. Chapter and Conference Paper

    MRI-Based Surgical Planning for Lumbar Spinal Stenosis

    The most common reason for spinal surgery in elderly patients is lumbar spinal stenosis (LSS). For LSS, treatment decisions based on clinical and radiological information as well as personal experience of the ...

    Gabriele Abbati, Stefan Bauer in Medical Image Computing and Computer Assis… (2017)

  2. No Access

    Chapter and Conference Paper

    Model Selection for Gaussian Process Regression

    Gaussian processes are powerful tools since they can model non-linear dependencies between inputs, while remaining analytically tractable. A Gaussian process is characterized by a mean function and a covarianc...

    Nico S. Gorbach, Andrew An Bian, Benjamin Fischer, Stefan Bauer in Pattern Recognition (2017)

  3. Article

    Open Access

    Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system

    This study aims to chemically characterize thin stillage derived from lignocellulosic biomass distillation residues in terms of organic strength, nutrient, and mineral content. The feasibility of performing an...

    Margreet J. Oosterkamp, Celia Méndez-García, Chang-H. Kim in Biotechnology for Biofuels (2016)

  4. Article

    Open Access

    Clinical Evaluation of a Fully-automatic Segmentation Method for Longitudinal Brain Tumor Volumetry

    Information about the size of a tumor and its temporal evolution is needed for diagnosis as well as treatment of brain tumor patients. The aim of the study was to investigate the potential of a fully-automatic...

    Raphael Meier, Urspeter Knecht, Tina Loosli, Stefan Bauer in Scientific Reports (2016)

  5. Chapter and Conference Paper

    Digital Innovation and the Becoming of an Organizational Identity

    Today, companies often face rapid and substantial change of their business environment. To stay competitive, firms are forced to engage in continuous innovation of their products and services. Moreover, the di...

    Nikolaus Obwegeser, Stefan Bauer in HCI in Business, Government, and Organizat… (2016)

  6. Article

    Open Access

    Environment Has Little Effect on Biomass Biochemical Composition of Miscanthus × giganteus Across Soil Types, Nitrogen Fertilization, and Times of Harvest

    Efficient conversion of lignocellulosic feedstocks to ethanol will benefit from a consistent composition of supplied biomass. While composition or quality for a given feedstock is known to vary, the influence ...

    Rebecca A. Arundale, Stefan Bauer, Fernanda B. Haffner in BioEnergy Research (2015)

  7. Article

    Open Access

    Fully automatic GBM segmentation in the TCGA-GBM dataset: Prognosis and correlation with VASARI features

    Reproducible definition and quantification of imaging biomarkers is essential. We evaluated a fully automatic MR-based segmentation method by comparing it to manually defined sub-volumes by experienced radiolo...

    Emmanuel Rios Velazquez, Raphael Meier, William D. Dunn Jr in Scientific Reports (2015)

  8. Article

    Open Access

    Does size matter? Separations on guard columns for fast sample analysis applied to bioenergy research

    Increasing sample throughput is needed when large numbers of samples have to be processed. In chromatography, one strategy is to reduce column length for decreased analysis time. Therefore, the feasibility of ...

    Stefan Bauer, Ana B. Ibáñez in BMC Biotechnology (2015)

  9. Article

    Open Access

    Fungi isolated from Miscanthus and sugarcane: biomass conversion, fungal enzymes, and hydrolysis of plant cell wall polymers

    Biofuel use is one of many means of addressing global change caused by anthropogenic release of fossil fuel carbon dioxide into Earth’s atmosphere. To make a meaningful reduction in fossil fuel use, bioethanol...

    Prachand Shrestha, Ana B Ibáñez, Stefan Bauer in Biotechnology for Biofuels (2015)

  10. No Access

    Article

    Rapid Small-Scale Determination of Extractives in Biomass

    The results of a small-scale method for the extraction of a range of feedstock samples, comprising herbaceous, hard, and soft wood, were compared to the conventional method using accelerated solvent extraction...

    Christina Kuchelmeister, Stefan Bauer in BioEnergy Research (2015)

  11. Chapter and Conference Paper

    The Effects of Awareness Programs on Information Security in Banks: The Roles of Protection Motivation and Monitoring

    Our aim is to understand how information security awareness (ISA) programs affect the intention of employees for compliant information security behavior. We draw on Protection Motivation Theory (PMT) to uncove...

    Stefan Bauer, Edward W.N. Bernroider in Human Aspects of Information Security, Pri… (2015)

  12. Article

    Open Access

    Reliability of a 3 T MRI protocol for objective grading of supraspinatus tendonosis and partial thickness tears

    Partial thickness supraspinatus tears and tendonosis can be managed either nonoperatively or by various arthroscopic techniques. New biologic treatment approaches are currently being investigated. MRI is commo...

    Stefan Bauer, Allan Wang, Rodney Butler in Journal of Orthopaedic Surgery and Research (2014)

  13. Article

    Open Access

    Analytical method for the determination of organic acids in dilute acid pretreated biomass hydrolysate by liquid chromatography-time-of-flight mass spectrometry

    For the development of lignocellulosic biofuels a common strategy to release hemicellulosic sugars and enhance the enzymatic digestibility of cellulose is the heat pretreatment of biomass with dilute acid. Dur...

    Ana B Ibáñez, Stefan Bauer in Biotechnology for Biofuels (2014)

  14. Article

    Open Access

    Overcoming inefficient cellobiose fermentation by cellobiose phosphorylase in the presence of xylose

    Cellobiose and xylose co-fermentation holds promise for efficiently producing biofuels from plant biomass. Cellobiose phosphorylase (CBP), an intracellular enzyme generally found in anaerobic bacteria, cleaves...

    Kulika Chomvong, Vesna Kordić, **n Li, Stefan Bauer in Biotechnology for Biofuels (2014)

  15. No Access

    Article

    Comprehensive Analysis of Monomeric Phenolics in Dilute Acid Plant Hydrolysates

    We carried out a comprehensive analysis of the phenolic compounds in hydrolysate produced by dilute acid pretreatment of 20 potential lignocellulosic biofuel feedstocks, including grasses, hardwoods and softwo...

    Valerie D. Mitchell, Caroline M. Taylor, Stefan Bauer in BioEnergy Research (2014)

  16. Article

    Open Access

    Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes

    Pectin-rich agricultural wastes potentially represent favorable feedstocks for the sustainable production of alternative energy and bio-products. Their efficient utilization requires the conversion of all majo...

    J Philipp Benz, Ryan J Protzko, Jonas MS Andrich in Biotechnology for Biofuels (2014)

  17. Protocol

    Detection of RNA Modifications by HPLC Analysis and Competitive ELISA

    Over 100 different RNA modifications exist that are introduced posttranscriptionally by enzymes at specific nucleotide positions. Ribosomal RNA (rRNA) and transfer RNA (tRNA) exhibit the most and diverse modif...

    Gernot Nees, Andreas Kaufmann, Stefan Bauer in Innate DNA and RNA Recognition (2014)

  18. No Access

    Chapter

    Atlas-Based Segmentation of Tumor-Bearing Brain Images

    In diagnostic neuroradiology as well as in radiation oncology and neurosurgery, there is an increasing demand for accurate segmentation of tumor-bearing brain images. Atlas-based segmentation is an appealing a...

    Stefan Bauer, Roland Wiest in Tumors of the Central Nervous System, Volu… (2014)

  19. No Access

    Chapter and Conference Paper

    Integrated Spatio-Temporal Segmentation of Longitudinal Brain Tumor Imaging Studies

    Consistent longitudinal segmentation of brain tumor images is a critical issue in treatment monitoring and in clinical trials. Fully automatic segmentation methods are a good candidate for reliably detecting c...

    Stefan Bauer, Jean Tessier, Oliver Krieter in Medical Computer Vision. Large Data in Med… (2014)

  20. Chapter and Conference Paper

    Patient-Specific Semi-supervised Learning for Postoperative Brain Tumor Segmentation

    In contrast to preoperative brain tumor segmentation, the problem of postoperative brain tumor segmentation has been rarely approached so far. We present a fully-automatic segmentation method using multimodal ...

    Raphael Meier, Stefan Bauer in Medical Image Computing and Computer-Assis… (2014)

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