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  1. Article

    Open Access

    Analysis of chromatin organization and gene expression in T cells identifies functional genes for rheumatoid arthritis

    Genome-wide association studies have identified genetic variation contributing to complex disease risk. However, assigning causal genes and mechanisms has been more challenging because disease-associated varia...

    **g Yang, Amanda McGovern, Paul Martin, Kate Duffus, **angyu Ge in Nature Communications (2020)

  2. No Access

    Article

    Knowledge and Perceptions of Hepatitis B and Hepatocellular Carcinoma Screening Guidelines Among Trainees: A Tale of Three Centers

    Hepatitis B (HBV), the leading cause of hepatocellular carcinoma (HCC) worldwide, disproportionately affects minorities in the USA. Undiagnosed HBV precludes HCC screening and contributes to late-stage cancer ...

    Mahmoud Mahfouz, Harry Nguyen, Jonathan Tu in Digestive Diseases and Sciences (2020)

  3. Article

    Open Access

    Efficacy and safety of sofosbuvir in the treatment of hep C among patients on hemodialysis: a systematic review and meta-analysis

    Hepatitis C virus (HCV) infection among maintenance hemodialysis patients is implicated in increased morbidity and mortality compared to uninfected patients. Sofosbuvir (SOF)-based regimens may not be optimal ...

    Fadi Shehadeh, Markos Kalligeros, Katrina Byrd, Douglas Shemin in Scientific Reports (2020)

  4. Article

    Open Access

    Map** DNA interaction landscapes in psoriasis susceptibility loci highlights KLF4 as a target gene in 9q31

    Genome-wide association studies (GWAS) have uncovered many genetic risk loci for psoriasis, yet many remain uncharacterised in terms of the causal gene and their biological mechanism in disease. This is largel...

    Helen Ray-Jones, Kate Duffus, Amanda McGovern, Paul Martin, Chenfu Shi in BMC Biology (2020)

  5. No Access

    Article

    Representations of the Necklace Braid Group: Topological and Combinatorial Approaches

    The necklace braid group \({\mathcal {NB}}_n\)NBn is the motion group of the \(n+1\)n+1 component necklace link \(\mathcal {L}_n\)Ln in Euclidean \(\mathbb {R}^3\)R3. Here \(\mathcal {L}_n\)Ln consists of n pairw...

    Alex Bullivant, Andrew Kimball, Paul Martin in Communications in Mathematical Physics (2020)

  6. No Access

    Article

    Bacterial Infection in Patients with Cirrhosis: Don’t Get Bugged to Death

    Bacterial infection remains a leading cause of mortality and morbidity for patients with cirrhosis, with hospitalization, alterations in the intestinal microbiota, and therapeutic drugs all implicated in its d...

    Mary D. Cannon, Paul Martin, Andres F. Carrion in Digestive Diseases and Sciences (2020)

  7. Chapter

    Virtual Infrastructure Optimisation

    The increasing volumes of data being produced, curated and made available by research infrastructures in the environmental science domain require services able to optimise the delivery staging and process of d...

    Spiros Koulouzis, Paul Martin, Zhiming Zhao in Towards Interoperable Research Infrastruct… (2020)

  8. Chapter

    The ENVRI Reference Model

    Advances in automation, communication, sensing and computation enable experimental scientific processes to generate data at increasingly great speeds and volumes. Research infrastructures are devised to take a...

    Abraham Nieva de la Hidalga, Alex Hardisty in Towards Interoperable Research Infrastruct… (2020)

  9. Chapter

    Semantic Linking of Research Infrastructure Metadata

    The use of metadata to characterise scientific datasets, making data easier to discover and use directly by researchers and via various online data services, is one of the primary concerns of research infrastr...

    Paul Martin, Barbara Magagna, **aofeng Liao in Towards Interoperable Research Infrastruct… (2020)

  10. Chapter

    Semantic and Knowledge Engineering Using ENVRI RM

    The ENVRI Reference Model provides architects and engineers with the means to describe the architecture and operational behaviour of environmental and Earth science research infrastructures (RIs) in a standard...

    Paul Martin, **aofeng Liao, Barbara Magagna in Towards Interoperable Research Infrastruct… (2020)

  11. Chapter

    Data Cataloguing

    After a brief reminder on general concepts used in data cataloguing activities, this chapter provides information concerning the architecture and design recommendations for the implementation of catalogue syst...

    Erwann Quimbert, Keith Jeffery in Towards Interoperable Research Infrastruct… (2020)

  12. Chapter

    Common Challenges and Requirements

    Research infrastructures available for researchers in environmental and Earth science are diverse and highly distributed; dedicated research infrastructures exist for atmospheric science, marine science, solid...

    Barbara Magagna, Paul Martin in Towards Interoperable Research Infrastruct… (2020)

  13. Chapter

    Data Provenance

    The provenance of research data is of critical importance to the reproducibility of and trust in scientific results. As research infrastructures provide more amalgamated datasets for researchers and more integ...

    Barbara Magagna, Doron Goldfarb, Paul Martin in Towards Interoperable Research Infrastruct… (2020)

  14. No Access

    Article

    Prevention and Management of HBV Infection in Patients with Chronic Kidney Disease Requiring Renal Transplantation

    This review addresses clinical challenges of hepatitis B virus (HBV) infection in patients with chronic kidney disease and renal transplant recipients.

    Andres F. Carrion, Paul Martin in Current Hepatology Reports (2018)

  15. Article

    Open Access

    Structure Properties of Generalized Farey graphs based on Dynamical Systems for Networks

    Farey graphs are simultaneously small-world, uniquely Hamiltonian, minimally 3-colorable, maximally outerplanar and perfect. Farey graphs are therefore famous in deterministic models for complex networks. By l...

    Wenchao Jiang, Yinhu Zhai, Paul Martin, Zhiming Zhao in Scientific Reports (2018)

  16. Article

    Open Access

    Fiat categorification of the symmetric inverse semigroup \(\textit{IS}_n\) and the semigroup \(F^*_n\)

    Starting from the symmetric group \(S_n\) S ...

    Paul Martin, Volodymyr Mazorchuk in Semigroup Forum (2018)

  17. No Access

    Article

    The Impact of Race on Survival After Hepatocellular Carcinoma in a Diverse American Population

    Hepatocellular carcinoma (HCC) incidence is increasing at differential rates depending on race. We aimed to identify associations between race and survival after HCC diagnosis in a diverse American population.

    Patricia D. Jones, Carlos Diaz, Danlu Wang in Digestive Diseases and Sciences (2018)

  18. No Access

    Chapter and Conference Paper

    Develo**, Provisioning and Controlling Time Critical Applications in Cloud

    Quality constraints on time critical applications require high-performance supporting infrastructure and sophisticated optimisation mechanisms for develo** and integrating system components. The lack of soft...

    Zhiming Zhao, Paul Martin, Andrew Jones in Advances in Service-Oriented and Cloud Com… (2018)

  19. Article

    Heterogeneity of Outcomes Following Liver Transplantation for Primary Sclerosing Cholangitis: Age Matters

    Paul Martin, Keith D Lindor in Digestive Diseases and Sciences (2017)

  20. Article

    Open Access

    Pharmacokinetics and pharmacogenetics of the MEK1/2 inhibitor, selumetinib, in Asian and Western healthy subjects: a pooled analysis

    Emerging data on selumetinib, a MEK1/2 inhibitor in clinical development, suggest a possible difference in pharmacokinetics (PK) between Japanese and Western patients. This pooled analysis sought to assess the...

    Angela W. Dymond, Cathy Elks, Paul Martin in European Journal of Clinical Pharmacology (2017)

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