Abstract
Identification and characterization of CD8+ T-cells is important to determine their role in protecting and clearing viral infections. Here we provide details of the peptide-MHC (pMHC) tetramers-based approach to identify antigen-specific T-cells in human and murine samples. This method provides ex vivo quantification and functional characterization of T-cells reactive to specific viral antigens derived from CMV and rotavirus in human blood and in murine intestinal lamina propria samples, respectively.
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References
Altman JD, Moss PAH, Goulder PJR, Barouch DH, McHeyzer-Williams MG, Bell JI, McMichael AJ, Davis MM (1996) Phenotypic analysis of antigen-specific T lymphocytes. Science 274(5284):94–96. https://doi.org/10.1126/science.274.5284.94
Bakker AH, Hoppes R, Linnemann C, Toebes M, Rodenko B, Berkers CR, Hadrup SR, van Esch WJ, Heemskerk MH, Ovaa H, Schumacher TN (2008) Conditional MHC class I ligands and peptide exchange technology for the human MHC gene products HLA-A1, -A3, -A11, and -B7. Proc Natl Acad Sci USA 105(10):3825–3830. https://doi.org/10.1073/pnas.0709717105
Giest S, McWhinnie A, Lefranc M-P, Little A-M, Grace S, Mackinnon S, Madrigal JA, Travers PJ (2012) Cytomegalovirus-specific CD8+ T cells targeting different peptide/HLA combinations demonstrate varying T-cell receptor diversity. Immunology 135(1):27–39. https://doi.org/10.1111/j.1365-2567.2011.03508.x
Jaimes MC, Feng N, Greenberg HB (2005) Characterization of homologous and heterologous rotavirus-specific T-cell responses in infant and adult mice. J Virol 79(8):4568–4579. https://doi.org/10.1128/JVI.79.8.4568-4579.2005
Muleta KG, Ulmert I, Hamza KH, van Dijl S, Nakawesi J, Lahl K (2022) Rotavirus-induced expansion of antigen-specific CD8 T cells does not require signaling via TLR3, MyD88 or the type I interferon receptor. Front Immunol 13:814491. https://doi.org/10.3389/fimmu.2022.814491
Prussin C, Metcalfe DD (1995) Detection of intracytoplasmic cytokine using flow cytometry and directly conjugated anti-cytokine antibodies. J Immunol Methods 188(1):117–128. https://doi.org/10.1016/0022-1759(95)00209-x
Rammensee H-G, Friede T, Stevanović S (1995) MHC ligands and peptide motifs: first listing. Immunogenetics 41(4):178–228. https://doi.org/10.1007/BF00172063
Rodenko B, Toebes M, Hadrup SR, van Esch WJ, Molenaar AM, Schumacher TN, Ovaa H (2006) Generation of peptide-MHC class I complexes through UV-mediated ligand exchange. Nat Protoc 1(3):1120–1132. https://doi.org/10.1038/nprot.2006.121
Saini SK, Abualrous ET, Tigan AS, Covella K, Wellbrock U, Springer S (2013) Not all empty MHC class I molecules are molten globules: tryptophan fluorescence reveals a two-step mechanism of thermal denaturation. Mol Immunol 54(3–4):386–396. https://doi.org/10.1016/j.molimm.2013.01.004
Saini SK, Tamhane T, Anjanappa R, Saikia A, Ramskov S, Donia M, Svane IM, Jakobsen SN, Garcia-Alai M, Zacharias M, Meijers R, Springer S, Hadrup SR (2019) Empty peptide-receptive MHC class I molecules for efficient detection of antigen-specific T cells. Sci Immunol 4(37):eaau9039. https://doi.org/10.1126/sciimmunol.aau9039
Savic M, Dembinski JL, Kim Y, Tunheim G, Cox RJ, Oftung F, Peters B, Mjaaland S (2016) Epitope specific T-cell responses against influenza A in a healthy population. Immunology 147(2):165–177. https://doi.org/10.1111/imm.12548
Sun T, Rojas OL, Li C, Ward LA, Philpott DJ, Gommerman JL (2017) Intestinal Batf3-dependent dendritic cells are required for optimal antiviral T-cell responses in adult and neonatal mice. Mucosal Immunol 10(3):775–788. https://doi.org/10.1038/mi.2016.79
Acknowledgments
We thank Sara Suárez Hernández for making the murine rotavirus-specific tetramers.
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© 2024 The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature
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Trubach, D., Muleta, K.G., Lahl, K., Saini, S.K. (2024). Identification and Characterization of Antigen-Specific T-Cells in Viral Infections. In: Thakur, A. (eds) Intracellular Pathogens. Methods in Molecular Biology, vol 2813. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-3890-3_19
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DOI: https://doi.org/10.1007/978-1-0716-3890-3_19
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