Abstract
Drug-related kidney stones are a diagnostic problem, since they contain a large matrix (protein) fraction and are frequently incorrectly identified as matrix stones. A urine proteomics study patient produced a guaifenesin stone during her participation, allowing us to both correctly diagnose her disease and identify proteins critical to this drug stone-forming process. The patient provided three random midday urine samples for proteomics studies; one of which contained stone-like sediment with two distinct fractions. These solids were characterized with optical microscopy and Fourier transform infrared spectroscopy. Immunoblotting and quantitative mass spectrometry were used to quantitatively identify the proteins in urine and stone matrix. Infrared spectroscopy showed that the sediment was 60 % protein and 40 % guaifenesin and its metabolite guaiacol. Of the 156 distinct proteins identified in the proteomic studies, 49 were identified in the two stone-components with approximately 50 % of those proteins also found in this patient’s urine. Many proteins observed in this drug-related stone have also been reported in proteomic matrix studies of uric acid and calcium containing stones. More importantly, nine proteins were highly enriched and highly abundant in the stone matrix and 8 were reciprocally depleted in urine, suggesting a critical role for these proteins in guaifenesin stone formation. Accurate stone analysis is critical to proper diagnosis and treatment of kidney stones. Many matrix proteins were common to all stone types, but likely not related to disease mechanism. This protocol defined a small set of proteins that were likely critical to guaifenesin stone formation based on their high enrichment and high abundance in stone matrix, and it should be applied to all stone types.
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Abbreviations
- BMI:
-
Body mass index
- FTIR:
-
Fourier transform infrared spectroscopy
- GC:
-
Guaifenesin.guaiacol crystal mixture
- GF:
-
Orange stone sediment containing guaifenesin and guaiacol crystals)
- IRB:
-
Institutional Review Board
- LC–MS:
-
Liquid chromatography coupled with mass spectrometry
- MCW:
-
Medical College of WISCONSIN
- MIS.MAC:
-
Mandel International Stone and Molecular Analysis Center
- MS:
-
Mass spectrometry
- MX:
-
Matrix strand stone sediment containing few drug crystals
- P/C:
-
Protein/creatinine ratio in urine (mg/g)
- SG:
-
Specific gravity
- UA:
-
Uric acid stone matrix
- UM:
-
Urine macromolecules
- VA:
-
US Department of Veterans Affairs
- % SC:
-
Percentage of total assigned scan counts attributable to an individual or group of proteins
All protein abbreviations are defined in Table 3
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Acknowledgments
We gratefully acknowledge the primary financial support provided in part with resources and the use of facilities at the Clement J. Zablocki Department of Veterans Affairs Medical Center, Milwaukee, WI, and in part by the National Institutes of Health/National Institute for Diabetes, Digestive, and Kidney Diseases (DK 82550) (JAW). Additional financial support was provided by the Medical College of Wisconsin and in part by the National Institutes of Health/National Institute for Diabetes, Digestive, and Kidney Diseases (DK 74741) (JGK). We also gratefully acknowledge the technical support MIS.MAC (Mandel International Stone and Molecular Analysis Center), Milwaukee, WI, for stone analysis and the technical support of Brian Halligan, PhD, for proteomic analysis.
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This study was primarily funded with resources and the use of facilities at the Clement J. Zablocki Department of Veterans Affairs Medical Center, Milwaukee, WI, and in part by a grant from the National Institutes of Health (NIDDK, DK 82550-JAW). Additional financial support was provided by the Medical College of Wisconsin and in part by the National Institutes of Health (NIDDK, DK 74741-JGK).
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None of the authors has any conflicts of interest to report.
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The participating patient in this study was recruited with informed consent to an established study under VA IRB approval (VA-IRB protocol: 9305-01P). All procedures performed in these studies were in accordance with the ethical standards of the institutional and national research committee and with the 1964 Helsinki declaration and its later amendments.
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Kolbach-Mandel, A.M., Mandel, N.S., Cohen, S.R. et al. Guaifenesin stone matrix proteomics: a protocol for identifying proteins critical to stone formation. Urolithiasis 45, 139–149 (2017). https://doi.org/10.1007/s00240-016-0907-4
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DOI: https://doi.org/10.1007/s00240-016-0907-4