Log in

Genetic relationships among actinomycetes that produce the immunosuppressant macrolides FK506, FK520/FK523 and rapamycin

  • Published:
Journal of Industrial Microbiology

Summary

A polyphasic taxonomic study was undertaken to establish the genetic and phenotypic relationships among six actinomycetes that produce the immunosuppressant macrolides FK506, FK520/FK523 and rapamycin. Chemotaxonomic studies reveal that all have Type I cell walls. Gas chromatography (GC) of fatty acid methyl esters revealed patterns consistent for strains ofStreptomyces with 16∶0 and 15∶0anteiso predominating. Principal component analysis of GC data revealed distinct profiles for each culture. Reciprocal DNA homology studies atT m -25 showed the rapamycin-producing strain and one FK506-producing strain to have 38–50% homology with the type strain ofStreptomyces hygroscopicus (ATCC 27438). The remaining strains exhibited 6–17% homology. To further explore the relationships among these strains all were probed for the presence of anO-methyltransferase gene specific to this biosynthetic pathway. Among the strains of interest, onlyStreptomyces hygroscopicus subsp.yakushimaensis, the patent strain for FK520/FK523, failed to hybridize with the probes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
EUR 32.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or Ebook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Anonymous. 1989. Spun column chromatography In: Molecular Cloning: A Laboratory Manual, 2nd edn (Sambrook, J., E.F. Fritsch and T.Maniatis, eds), Vol. 3 pp. E37–E38. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.

  2. Arai, T., Y. Koyama, T. Suenaga and H. Honda. 1962. Ascomycin, an antifungal antibiotic. J. Antibiot. Ser. A 25: 231–232.

    Google Scholar 

  3. Borris, R.P., S. Mochales, S. Hernandez, C.F. Hirsch, R. Sykes and G.M. Garrity. 1992. A New Process for Producing Immunosuppressant. US Patent pending.

  4. Byrne, K.M., A. Shafiee, B.H. Arison, R.L. Monaghan and L. Kaplan. 1992. The biosynthesis and enzymology of an immunosuppressant, immunomycin, produced byStreptomyces hygroscopicus var.ascomyceticus. In: Proceedings of the Second International Symposium on Novel Microbial Products Medicine and Agriculture (Nash, C., J. Hunter-Cevera, R. Cooper, D.E. Eveleigh and R. Hamill, eds), pp. 29–46. Wm. C. Brown Communications, Inc., Dubuque, IA.

    Google Scholar 

  5. Couch, J.N. and C.E. Bland. 1974. Family IV. Actinoplanaecea Couch 1955, 269. In: Bergey's Manual of Determinative Bacteriology, 8th edn (Buchanan, R.E., and N.E. Gibbons, eds). Williams and Wilkins, Baltimore, MD.

    Google Scholar 

  6. Dumont, F.J., K. Byrne, N.H. Sigal, L. Kaplan, R.L. Monaghan and G.M. Garrity. 1989. Novel Immunosuppressant Agent. European Patent Application EP 0 323 865.

  7. Dumont, F., G.M. Garrity, I. Fernandez and T. Diez Matas. 1992. New Process for Producing FK-506. US Patent 5, 116, 756.

  8. Hatanaka, H., M. Iwami, T. Kino, T. Goto and M. Okuhara. 1988. FR-900520 and FR-900523, novel immunosuppressants isolated from aStreptomyces. I. Taxonomy of the producing strain. J. Antibiot. 41: 1586–1591.

    PubMed  Google Scholar 

  9. Kafatos, F.C., C.W. Jones and A. Efstratiadis. 1979. Determination of nucleic acid sequence homologies and relative concentration by a dot hybridization procedure. Nucl. Acids Res. 7: 1541–1552.

    PubMed  Google Scholar 

  10. Kino, T., H. Hatanaka, M. Hashimoto, M. Nishiyama, T. Goto, M. Okuhara, M. Kohsaka, H. Aoki and H. Iminaka. 1987. FK-506, a novel immunosuppressant isolated from aStreptomyces. I. Fermentation, isolation, and physico-chemical and biological characteristics.J. Antibiot. 40: 1249–1255.

    PubMed  Google Scholar 

  11. Kroppenstedt, R.M. 1985. Fatty acid and menaquinone analysis of actinomycetes and related organisms. In: Chemical Methods in Bacterial Systematics (Goodfellow, M. and D. Minnikin, eds), pp. 173–199. Society for Applied Microbiology, Arlington, Virginia.

    Google Scholar 

  12. Labeda, D.P. and A.J. Lyons. 1991. TheStreptomyces violaceusniger cluster is heterogeneous in DNA relatedness among strains: emendation of the description ofS. violaceusniger andS. hygroscopicus. Int. J. Syst. Bacteriol. 41: 398–401.

    Google Scholar 

  13. Lechevalier, H. and M.P. Lechevalier. 1980. The chemotaxonomy of actinomycetes. In: Actinomycete Taxonomy. Procedures for Studying Aerobic Actinomycetes with Emphasis on Streptomycetes. (Dietz, A. and D.W. Thayer, eds), pp. 225–291. Society for Industrial Microbiology, Arlington, Virginia.

    Google Scholar 

  14. Marmur, J. 1961. A procedure for the isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 3: 208–218.

    Google Scholar 

  15. Miller, I. and T. Berger. 1985. Hewlett-Packard Application Note, pp. 228–241. Hewlett-Packard Co., Palo Alto, CA.

    Google Scholar 

  16. Rigby, P. W., M. Deickmann, C. Rhode and P. Berg. 1977. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J. Mol. Biol. 113: 237–251.

    PubMed  Google Scholar 

  17. Schreiber, S.L. 1991. Chemistry and biology of the immunophilins and their immunosuppressant ligands. Science 251: 283–287.

    PubMed  Google Scholar 

  18. Shafiee, A., H. Motamedi, T. Chen and L. Kaplan. 1992. Enzymology of FK506/FK520: purification, characterization andN-terminal amino acid sequencing ofS-adenosyl-l-methionine: 31-O-demethyl-immunomycin(FK506):O-methyltransferases. Abstracts of the ASM Conference on the Genetics and Molecular Biology of Industrial Microorganisms, October 11–15, 1992. Bloomington, Indiana.

  19. Shirling, E.B. and D. Gottlieb. 1966. Methods for characterization ofStreptomyces species. Int. J. Syst. Bacteriol. 16: 313–340.

    Google Scholar 

  20. Tanaka, H., A. Kuroda, H. Murasawa, M. Hasimoto, H. Hatanaka, T. Kino, T. Goto and M. Okuhara. 1987. Physicochemical properties of FK-506, a novel immunosuppressant isolated fromStreptomyces tsukubaensis. Transplant. Proc. 29: 11–16.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Garrity, G.M., Heimbuch, B.K., Motamedi, H. et al. Genetic relationships among actinomycetes that produce the immunosuppressant macrolides FK506, FK520/FK523 and rapamycin. Journal of Industrial Microbiology 12, 42–47 (1993). https://doi.org/10.1007/BF01570127

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01570127

Navigation