Collection
Multiscale Simulations of DNA from Electrons to Nucleosomes
- Submission status
- Open
- Open for submission from
- 14 August 2023
- Submission deadline
- Ongoing
Editors
-
Professor Wilma Olsen
Professor Olsen is affiliated to the Chemistry & Chemical Biology/Center for Quantitative Biology, Rutgers, The State University of New Jersey, USA
-
Professor John H Maddocks
Professor John H Maddocks is affiliated to the Laboratory for Computation and Visualization in Mathematics and Mechanics, EPFL, Lausane, Switzerland
-
Professor Pabolo D Dans
Professor Pabolo D Dans is affiliated to the Department of Biological Sciences (CENUR Litoral Norte - UdelaR) & Institut Pasteur de Montevideo, Uruguay
-
Professor Thomas H. Cheatham, III
Professor Thomas H. Cheatham, III is the Director of the Center for High Performance Computing at the University of Utah, USA
-
Professor Sarah Harris
Professor Sarah Harris is affiliated to the Astbury Center for Structural Molecular Biology, University of Leeds, UK
-
Professor Charlie Laughton
Professor Charlie Laughton is Professor of Computational Pharmaceutical Science, University of Nottingham, UK
-
Professor Modesto Orozco
Professor Modesto Orozco is affiliated to the Institute for Research into Biomedicine, IRB Barcelona, Spain
-
Professor Lois Pollack
Professor Lois Pollack is the John Edson Sweet Professor of Engineering, Cornell University, USA
Articles (10 in this collection)
-
-
Structure-based prediction of protein-nucleic acid binding using graph neural networks
Authors (first, second and last of 5)
- Jared M. Sagendorf
- Raktim Mitra
- Remo Rohs
- Content type: Review
- Open Access
- Published: 26 June 2024
-
DNA simulation benchmarks revealed with the accumulation of high-resolution structures
Authors
- Wilma K. Olson
- Robert T. Young
- Luke Czapla
- Content type: Review
- Open Access
- Published: 18 June 2024
-
Assessing RNA atomistic force fields via energy landscape explorations in implicit solvent
Authors
- Konstantin Röder
- Samuela Pasquali
- Content type: Review
- Open Access
- Published: 17 June 2024
-
Chromatin remodelers: a concise introduction for biophysicists
Authors
- Sophie Klempahn
- Helmut Schiessel
- Ralf Blossey
- Content type: Review
- Published: 06 June 2024
-
Regulation of chromatin architecture by protein binding: insights from molecular modeling
Authors
- Stephanie Portillo-Ledesma
- Tamar Schlick
- Content type: Review
- Published: 09 May 2024
-
A commentary on the ABC consortium and its impact on the development of mesoscopic models of DNA
Authors
- Federica Battistini
- Content type: Comment
- Published: 07 May 2024
-
MD-DATA: the legacy of the ABC Consortium
Authors
- Adam Hospital
- Modesto Orozco
- Content type: Comment
- Open Access
- Published: 07 May 2024
-
Multiscale simulations of DNA from electrons to nucleosomes: 22 years of the Ascona B-DNA Consortium
Authors
- Pablo Dans
- Content type: Review
- Published: 25 April 2024
-
DNA damage and repair in the nucleosome: insights from computational methods
Authors
- Natacha Gillet
- Elise Dumont
- Emmanuelle Bignon
- Content type: Review
- Published: 12 March 2024