Abstract
Soil microbial community include bacteria, fungi, actinomycetes, algae, and protozoa. The quantity is very large, there are hundreds of millions to tens of billions of microorganisms in 1 gram soil. Most soil microorganisms are beneficial to the growth and development of crops, and they have a significant impact on the formation and development of soil, material circulation, and fertility evolution. There are millions of species of bacteria and fungi on Earth, and they participate in almost all life processes. In addition, the total carbon content of bacteria is about 60–100% of the carbon content of plant. Soil is not simply a simple combination of soil particles and nutrient elements. As an active component of soil, soil microorganisms contribute to soil particles through the exchange of carbon dioxide and oxygen through metabolic activities in their life processes, as well as through the secretion of organic acids. A large aggregate structure is formed, and finally, a real soil is formed. Soil formation and development are closely related to the flora composition, biomass, and life activities of soil microorganisms. Microorganisms also play an important role in the biogeochemical cycle, including carbon, nitrogen, phosphorus, etc. The feedback or response of soil microbial communities to bamboo expansion will substantially impact the nutrient cycling process in the expanded ecosystem.
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References
Bever JD, Westover KM, Antonovics J (1997) Incorporating the soil community into plant population dynamics: the utility of the feedback approach. J Ecol 85:561–573
Chang EH, Chiu CY (2015) Changes in soil microbial community structure and activity in a cedar plantation invaded by moso bamboo. Appl Soil Ecol 91:1–7
Chang EH, Chen CP, Tian G, Chiu CY (2018) Replacement of natural hardwood forest with planted bamboo and cedar in a humid subtropical mountain affects soil microbial community. Appl Soil Ecol 124:146–154
Chen YP, Rekha PD, Arun AB, Shen FT, Lai WA, Young CC (2006) Phosphate solubilizing bacteria from subtropical soil and their tricalcium phosphate solubilizing abilities. Appl Soil Ecol 34:33–41
Chotte JL (2005) Importance of microorganisms for soil aggregation. In: Varma A, Buscot F (eds) Microorganisms in soils: roles in genesis and functions. Soil biology, vol 3. Springer, Berlin
Church GM (2006) Genomes for all. Sci Am 294:46–54
Dickie IA, Bolstridge N, Cooper JA, Peltzer DA (2010) Co-invasion by Pinus and its mycorrhizal fungi. New Phytol 187:475–484
Fierer N, Jackson RB (2006) The diversity and biogeography of soil bacterial communities. Proc Natl Acad Sci U S A 103:626–631
Frostegård Å, Tunlid A, Bååth E (2011) Use and misuse of PLFA measurements in soils. Soil Biol Biochem 43:1621–1625
Giri DD, Shukla PN, Kashyap S, Singh P, Kashyap AK, Pandey KD (2007) Variation in methanotrophic bacterial population along an altitude gradient at two slopes in tropical dry deciduous forest. Soil Biol Biochem 39:2424–2426
Gougoulias C, Clark JM, Shaw LJ (2014) The role of soil microbes in the global carbon cycle: tracking the below-ground microbial processing of plant-derived carbon for manipulating carbon dynamics in agricultural systems. J Sci Food Agric 94:2362–2371
Hall N (2007) Advanced sequencing technologies and their wider impact in microbiology. J Exp Biol 210:1518–1525
Hawkes CV, Wren IF, Herman DJ, Firestone MK (2005) Plant invasion alters nitrogen cycling by modifying the soil nitrifying community. Ecol Lett 8:976–985
Hayatsu M, Tago K, Saito M (2008) Various players in the nitrogen cycle: diversity and functions of the microorganisms involved in nitrification and denitrification. Soil Sci Plant Nutr 54:33–45
He D, Shen Q, Xu Q, Chen J, Cheng M, Mao X, Li Y (2015) Evolvement of structure and abundance of soil nitrogen-fixing bacterial community in Phyllostachys edulis plantations with age of time. Acta Pedol Sin 52:934–942
Hynson NA, Merckx VSFT, Perry BA, Treseder KK (2013) Identities and distributions of the co-invading ectomycorrhizal fungal symbionts of exotic pines in the Hawaiian islands. Biol Invasions 15:2373–2385
Kuypers MMM, Marchant HK, Kartal B (2018) The microbial nitrogen-cycling network. Nat Rev Microbiol 16:263–276
Li YC, Liu BR, Li SH, Qin H, Fu WJ, Xu QF (2014) Shift in abundance and structure of soil ammonia-oxidizing bacteria and archaea communities associated with four typical forest vegetations in subtropical region. J Soils Sediments 14:1577–1586
Li YC, Liang X, Li YF, Wang Q, Chen JH, Xu QF (2016) Effects of Phyllostachys edulis invasion of native broadleaf forest on soil fungal community. Chin J Appl Ecol 27:585–592
Li Y, Li Y, Chang SX, Xu Q, Guo Z, Gao Q, Qin Z, Yang Y, Chen J, Liang X (2017) Bamboo invasion of broadleaf forests altered soil fungal community closely linked to changes in soil organic C chemical composition and mineral N production. Plant Soil 418:507–521
Lin SS, Sun X, Wang X, Dou C, Li Y, Luo Q, Sun L, ** L (2013) Mycorrhizal studies and their application prospects in China. Acta Pratacul Sin 22:310–325
Lin YT, Tang SL, Pai CW, Whitman WB, Coleman DC, Chiu CY (2014) Changes in the soil bacterial communities in a cedar plantation invaded by moso bamboo. Microb Ecol 67:421–429
Lin YT, Whitman WB, Coleman DC, Shi SY, Tang SL, Chiu CY (2015) Changes of soil bacterial communities in bamboo plantations at different elevations. FEMS Microbiol Ecol 91:fiv033
Lin YT, Jia ZJ, Wang DM, Chiu CY (2017) Effects of temperature on the composition and diversity of bacterial communities in bamboo soils at different elevations. Biogeosciences 14:4879–4889
Liu L, Li Y, Li S, Hu N, He Y, Pong R, Lin D, Lu L, Law M (2012) Comparison of next-generation sequencing systems. J Biomed Biotechnol 2012:251364
Liu XS, Siemann E, Cui C, Liu YQ, Guo XM, Zhang L (2019) Moso bamboo (Phyllostachys edulis) invasion effects on litter, soil and microbial PLFA characteristics depend on sites and invaded forests. Plant Soil 438:85–99
Lorenzo P, Rodríguez-Echeverría S, González L, Freitas H (2010) Effect of invasive Acacia dealbata link on soil microorganisms as determined by PCR-DGGE. Appl Soil Ecol 44:245–251
Lowry E, Rollinson EJ, Laybourn AJ, Scott TE, Aiello-Lammens ME, Gray SM, Mickley J, Gurevitch J (2013) Biological invasions: a field synopsis, systematic review, and database of the literature. Ecol Evol 3:182–196
Lynch JM, Bragg E (1985) Microorganisms and soil aggregate stability. Springer, New York
Ma XJ, Chen T, Zhang GS, Wang R (2004) Microbial community structure along an altitude gradient in three different localities. Folia Microbiol 49:105–111
Margesin R, Jud M, Tscherko D, Schinner F (2009) Microbial communities and activities in alpine and subalpine soils. FEMS Microbiol Ecol 67:208–218
McLeod ML, Cleveland CC, Lekberg Y, Maron JL, Philippot L, Bru D, Callaway RM (2016) Exotic invasive plants increase productivity, abundance of ammonia-oxidizing bacteria and nitrogen availability in intermountain grasslands. J Ecol 104:994–1002
Moore J, Jiang J, Post W, Classen AT (2015) Decomposition by ectomycorrhizal fungi alters soil carbon storage in a simulation model. Ecosphere 6:1–16
Nakatsu CH (2007) Soil microbial community analysis using denaturing gradient gel electrophoresis. Soil Sci Soc Am J 71:562–571
Ormeño E, Baldy V, Ballini C, Larchevêque M, Périssol C, Fernandez C (2006) Effects of environmental factors and leaf chemistry on leaf litter colonization by fungi in a Mediterranean shrubland. Pedobiologia 1:1–10
Qin L, Huang S, Li Y (2005) Research progress in endophytic diazotroph. Chin Agr Sci Bull 2:150–159
Qin H, Niu L, Wu Q, Chen J, Li Y, Liang C, Xu Q, Fuhrmann JJ, Shen Y (2017) Bamboo forest expansion increases soil organic carbon through its effect on soil arbuscular mycorrhizal fungal community and abundance. Plant Soil 420:407–421
Quail MA, Smith M, Coupland P, Otto TD, Harris SR, Connor TR, Bertoni A, Swerdlow HP, Gu Y (2012) A tale of three next generation sequencing platforms: comparison of ion torrent, Pacific biosciences and Illumina MiSeq sequencers. BMC Genomics 13:341–341
Selosse M-A, Richard F, He X, Simard SW (2006) Mycorrhizal networks: des liaisons dangereuses? Trends Ecol Evol 21:621–628
Shen QL, He DH, Xu QF, Cheng M, Mao XW, Li YC, Chen JH (2016) Variation of nifH gene diversity of soil nitrogen-fixing bacteria in Moso bamboo (Phyllostachys pubescens) plantation converted from broadleaf forest. J Plant Nutr 22:687–696
Straiton J, Free T, Sawyer A, Martin J (2019) From sanger sequencing to genome databases and beyond. BioTechniques 66:60–63
Sun X, Gao C, Guo L (2013) Changes in soil microbial community and enzyme activity along an exotic plant Eupatorium adenophorum invasion in a Chinese secondary forest. Chin Sci Bull 58:4101–4108
Tang J, Guo X, Lu X, Liu M, Zhang H, Feng Y, Kong D (2021) A review on the effects of invasive plants on mycorrhizal fungi of native plants and their underlying mechanisms. Chin J Plant Ecol 44:1–18
Tian XK, Wang MY, Meng P, Zhang JS, Zhou BZ, Ge XG, Yu FH, Li MH (2020) Native bamboo invasions into subtropical forests alter microbial communities in litter and soil. Forests 11:314
Torsvik V, Ovreas L, Thingstad TF (2002) Prokaryotic diversity-magnitude, dynamics, and controlling factors. Science 296:1064–1066
Trivedi P, Delgado-Baquerizo M, Trivedi C, Hu H, Anderson IC, Jeffries TC, Zhou J, Singh BK (2016) Microbial regulation of the soil carbon cycle: evidence from gene–enzyme relationships. ISME J 10:2593–2604
Walbert K, Ramsfield TD, Ridgway HJ, Jones EE (2010) Ectomycorrhizal species associated with Pinus radiata in New Zealand including novel associations determined by molecular analysis. Mycorrhiza 20:209–215
Wang G, Zhao Y, Zhou D, Yang Q (2003) Review of phosphate solubilizing microorganisms. Ecol Environ 01:96–101
Wang QZ, Fang XQ, Jiang PK, Qin H (2009) DGGE analysis of PCR of 16s rDNA V3 fragments of soil bacteria community in soil under natural broadleaf forest invaded by Phyllostachys pubescens in Tianmu mountain nature reserve. Acta Pedol Sin 46:662–669
Wang X, Sasaki A, Toda M, Nakatsubo T (2017) Changes in soil microbial community and activity in warm temperate forests invaded by moso bamboo (Phyllostachys pubescens). J For Res 21:235–243
Weaver W (1970) Molecular biology: origin of the term. Science 170:581–582
Whitman WB, Coleman DC, Wiebe WJ (1998) Prokaryotes: the unseen majority. Proc Natl Acad Sci 95:6578–6583
Xu QF, Jiang PK, Wu JS, Zhou GM, Shen RF, Fuhrmann JJ (2015) Bamboo invasion of native broadleaf forest modified soil microbial communities and diversity. Biol Invasions 17:433–444
Zhang LM, Wang M, Prosser JI, Zheng YM, He JZ (2009) Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest. FEMS Microbiol Ecol 70:52–61
Zhang MM, Fan SH, Guan FY, Yan XR, Yin ZX (2020) Soil bacterial community structure of mixed bamboo and broad-leaved forest based on tree crown width ratio. Sci Rep 10:6522
Zhu YG, Miller RM (2003) Carbon cycling by arbuscular mycorrhizal fungi in soil-plant systems. Trends Plant Sci 8:407–409
Zou J, Rogers WE, DeWalt SJ, Siemann E (2006) The effect of Chinese tallow tree (Sapium sebiferum) ecotype on soil plant system carbon and nitrogen processes. Oecologia 150:272–281
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Zhang, L. (2023). Bamboo Expansion and Soil Microbial Communities. In: Bamboo Expansion: Processes, Impacts, and Management. Springer, Singapore. https://doi.org/10.1007/978-981-99-4113-1_12
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DOI: https://doi.org/10.1007/978-981-99-4113-1_12
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