Abstract
Burgeoning human population and the resultant pressure on infrastructure to treat the wastes is resulting in considerable organic pollution of coastal waters and estuaries. Partially treated and untreated sewage is released into the above natural waters along with its range of microflora besides other organic and inorganic pollutants. Sources of bacterial pathogens in the sewage vary from hospital wastewater, human dwellings, abattoirs, farm wastes, and animal production centers. Short generation time of prokaryotes coupled with their exceptional ability to do horizontal gene transfer (HGT) makes them the most successful form of life on earth. However, this has huge implications for human health as the antimicrobial resistance (AMR) determinants among them get exchanged at a rapid pace resulting in multidrug-resistant (MDR) pathogens. Infections caused by MDR pathogens are taking a serious toll on human life in both developed and develo** countries, posing a nightmare to health authorities and medical practitioners the world over. This book chapter deals with the extent of drug resistance and virulence enhancing mechanisms among three major groups of pathogens such as diarrheagenic E. coli, pathogenic vibrios, and motile aeromonads from estuaries and coastal waters which provide an ideal habitat for the coexistence of pathogens, opportunists, and commensals.
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References
Ahammad ZS et al (2014) Increased waterborne blaNDM-1 resistance gene abundances associated with seasonal human pilgrimages to the Upper Ganges River. Environ Sci Technol 48:3014–3020. https://doi.org/10.1021/es405348h
Akhter A, Imran M, Akhter F (2014) Antimicrobial resistant coliform bacteria in the Gomti river water and determination of their tolerance level. Bioinformation 10(4):167–174. https://doi.org/10.6026/97320630010167
Akiba M, Senba H, Otagiri H, Prabhasankar VP, Taniyasu S, Yamashita N, Lee K, Yamamoto T, Tsutsui T, Ian Joshua D, Balakrishna K, Bairy I, Iwata T, Kusumoto M, Kannan K, Guruge KS (2015) Impact of wastewater from different sources on the prevalence of antimicrobial-resistant Escherichia coli in sewage treatment plants in South India. Ecotoxicol Environ Saf 115:203–208. https://doi.org/10.1016/j.ecoenv.2015.02.018
Akiba M, Sekizuka T, Yamashita A, Kuroda M, Fujii Y, Murata M, Lee K, Joshua DI, Balakrishna K, Bairy I, Subramanian K, Krishnan P, Munuswamy N, Sinha RK, Iwata T, Kusumoto M, Guruge KS (2016) Distribution and relationships of antimicrobial resistance determinants among extended-spectrum-cephalosporin-resistant or carbapenem-resistant Escherichia coli isolates from rivers and sewage treatment plants in India. Antimicrob Agents Chemother 60:2972–2980. https://doi.org/10.1128/AAC.01950-15
Alekshun MN, Levy SB (2007) Molecular mechanisms of antibacterial multidrug resistance. Cell 128:1037–1050. https://doi.org/10.1016/j.cell.2007.03.004
Alipour M, Hajiesmaili R, Talebjannat M, Yahyapour Y (2014) Identification and antimicrobial resistance of Enterococcus spp. isolated from the river and coastal waters in northern Iran. Sci World J 2014:287458. https://doi.org/10.1155/2014/287458
Amabile-Cuevas CF, Chicurel ME (1992) Bacterial plasmids and gene flux. Cell 70:189–199. https://doi.org/10.1016/0092-8674(92)90095-T
Andres P, Lucero C, Soler-Bistué A, Guerriero L, Albornoz E, Tran T, Zorreguieta A, PMQR Group, Galas M, Corso A, Tolmasky ME, Petroni A (2013) Differential distribution of plasmid-mediated quinolone resistance genes in clinical enterobacteria with unusual phenotypes of quinolone susceptibility from Argentina. Antimicrob Agents Chemother 57:2467–2475. https://doi.org/10.1128/AAC.01615-12
Armon RH, Starosvetsky J (2015) Point source pollution indicators. In: Armon RH, Hänninen O (eds) Environmental Indicators. Springer, New York, NY, pp 495–499
Babic M, Hujer AM, Bonomo RA (2006) What’s new in antibiotic resistance? Focus on beta-lactamases. Drug Resist Update 9:142–156. https://doi.org/10.1016/j.drup.2006.05.005
Bag PK, Bhowmik P, Hajra TK, Ramamurthy T, Sarkar P, Majumder M, Chowdhury G, Das SC (2008) Putative virulence traits and pathogenicity of Vibrio cholerae non-O1, non-O139 isolates from surface waters in Kolkata, India. App Environ Microbiol 74(18):5635–5644. https://doi.org/10.1128/AEM.00029-08
Bass L, Liebert CA, Lee MD, Summers AO, White DG, Thayer SG, Maurer JJ (1999) Incidence and characterization of integrons, genetic elements mediating multiple-drug resistance, in avian Escherichia coli. Antimicrob Agents Chemother 43:2925–2929
Batard E, Ollivier F, Boutoille D, Hardouin JB, Montassier E, Caillon J, Ballereau F (2013) Relationship between hospital antibiotic use and quinolone resistance in Escherichia coli. Int J Infect Dis 17:e254–e258. https://doi.org/10.1016/j.ijid.2012.10.005
Beka L, Fullmer MS, Colston SM, Nelson MC, Talagrand-Reboul E, Walker P, Ford B, Whitaker IS, Lamy B, Gogarten JP, Graf J (2018) Low-level antimicrobials in the medicinal leech select for resistant pathogens that spread to patients. MBio 9:1–17. https://doi.org/10.1128/mBio.01328-18
Belding C, Boopathy R (2018) Presence of antibiotic-resistant bacteria and antibiotic resistance genes in coastal recreational waters of southeast Louisiana, USA. J Water Supply Res Technol Aqua 67(8):800–809. https://doi.org/10.2166/aqua.2018.076
Bengtsson-Palme J, Boulund F, Fick J, Kristiansson E, Larsson DG (2014) Shotgun metagenomics reveals a wide array of antibiotic resistance genes and mobile elements in a polluted lake in India. Front Microbiol 5:1–14. https://doi.org/10.3389/fmicb.2014.00648
Berendonk TU, Manaia CM, Merlin C, Fatta-Kassinos D, Cytryn E, Walsh F, Bürgmann H, Sørum H, Norström M, Pons MN, Kreuzinger N, Huovinen P, Stefani S, Schwartz T, Kisand V, Baquero F, Martinez JL (2015) Tackling antibiotic resistance: the environmental framework. Nat Rev Microbiol 13:310–317. https://doi.org/10.1038/nrmicro3439
Bergstrom CT, Lipsitch M, Levin BR (2000) Natural selection, infectious transfer and the existence conditions for bacterial plasmids. Genetics 155:1505–1519
Bhardwaj R, Gupta A, Garg JK (2015) Prevalence of multidrug resistance in Escherichia coli strains isolated from river Yamuna, Delhi stretch. Int J Bioassay. https://doi.org/10.21746/ijbio.2015.11.0010
Biswas K, Paul D, Sinha SN (2015) Prevalence of multiple antibiotic-resistant coliform bacteria in the water of River Ganga. Sci Publ Gr 1:44. https://doi.org/10.11648/j.fem.20150103.12
Blaak H, de Kruijf P, Hamidjaja RA, van Hoek AH, de Roda Husman AM, Schets FM (2014) Prevalence and characteristics of ESBL-producing E. coli in Dutch recreational waters influenced by wastewater treatment plants. Vet Microbiol 171:448–459. https://doi.org/10.1016/j.vetmic.2014.03.007
Blair JM, Webber MA, Baylay AJ, Ogbolu DO, Piddock LJ (2015) Molecular mechanisms of antibiotic resistance. Nat Rev Microbiol 13:42–51. https://doi.org/10.1038/nrmicro3380
Blasco MD, Esteve C, Alcaide E (2008) Multiresistant waterborne pathogens isolated from water reservoirs and cooling systems. J Appl Microbiol 105:469–475. https://doi.org/10.1111/j.1365-2672.2008.03765.x
Bonner WN (1984) Conservation and the Antarctic. In: Laws RM (ed) Antarctic ecology, vol 2. Academic, London, pp 821–850
Borja A, Dauer DM, Elliott M, Simenstad CA (2010) Medium-and long-term recovery of estuarine and coastal ecosystems: patterns, rates and restoration effectiveness. Estuar Coasts 33:1249–1260. https://doi.org/10.1007/s12237-010-9347-5
Cabello FC (2006) Heavy use of prophylactic antibiotics in aquaculture: a growing problem for human and animal health and for the environment. Environ Microbiol 8:1137–1144
Cabello FC, Godfrey HP, Tomova A, Ivanova L, Dölz H, Millanao A, Buschmann AH (2013) Antimicrobial use in aquaculture re-examined: its relevance to antimicrobial resistance and to animal and human health. Environ Microbiol 15:1917–1942. https://doi.org/10.1111/1462-2920.12134
Carpentier S, Moilleron R, Beltran C, Hervé D, Thévenot D (2002) Quality of dredged material in the river Seine basin (France). II. Micropollutants. Sci Total Environ 299:57–72
Carvalho EM, Costa RA, Araujo AJ, Carvalho FCT, Pereira SP, Sousa OV, Vieira RH (2014) Multiple antibiotic-resistance of Enterococcus isolated from coastal water near an outfall in Brazil. AJMR 8(17):1825–1831. https://doi.org/10.5897/AJMR2014.6672
Chaix G, Roger F, Berthe T, Lamy B, Jumas-Bilak E, Lafite R, Forget-Leray J, Petit F (2017) Distinct Aeromonas populations in water column and associated with copepods from estuarine environment (Seine, France). Front Microbiol 8:1–13. https://doi.org/10.3389/fmicb.2017.01259
Chandran SP, Diwan V, Tamhankar AJ, Joseph BV (2014) Detection of carbapenem resistance genes and cephalosporin, and quinolone resistance genes along with oqxAB gene in Escherichia coli in hospital wastewater: a matter of concern. J Appl Microbiol 117(4):984–995. https://doi.org/10.1111/jam.12591
Chaudhry D, Tomar P (2017) Antimicrobial resistance: the next big pandemic. Int J Community Med Public Health 4:2632–2636. https://doi.org/10.18203/2394-6040.ijcmph20173306
Chaudhuri D, Chowdhury AR, Biswas B, Chakravortty D (2018) Salmonella typhimurium infection leads to colonization of the mouse brain and is not completely cured with antibiotics. Front. Microbiol 9:1632. https://doi.org/10.3389/fmicb.2018.01632
Chiou CS, Jones AL (1993) Nucleotide sequence analysis of a transposon (Tn5393) carrying streptomycin resistance genes in Erwinia amylovora and other Gram-negative bacteria. J Bacteriol 175:732–740. https://doi.org/10.1128/jb.175.3.732-740.1993
Clewell DB, Flannagan SE, Jaworski DD (1995) Unconstrained bacterial promiscuity: the Tn916-Tn1545 family of conjugative transposons. Trends Microbiol 3:229–236. https://doi.org/10.1016/S0966-842X(00)88930-1
Coleman BL, Louie M, Salvadori MI, McEwen SA, Neumann N, Sibley K, Irwin RJ, Jamieson FB, Daignault D, Majury A, Braithwaite S, Crago B, McGeer AJ (2013) Contamination of Canadian private drinking water sources with antimicrobial resistant Escherichia coli. Water Res 47:3026–3036. https://doi.org/10.1016/j.watres.2013.03.008
D’Costa VM, McGrann KM, Hughes DW, Wright GD (2006) Sampling the antibiotic resistome. Science 311:374–377. https://doi.org/10.1126/science.1120800
Dahiya S, Sharma P, Kumari B, Pandey S, Malik R, Manral N, Veeraraghavan B, Pragasam AK, Ray P, Gautam V, Sistla S, Parija SC, Walia K, Ohri V, Das BK, Sood S, Kapil A (2017) Characterisation of antimicrobial resistance in Salmonellae during 2014-2015 from four centres across India: an ICMR antimicrobial resistance surveillance network report. Indian J Med Microbiol 35:61. https://doi.org/10.4103/ijmm.IJMM_16_382
Daniel DS, Lee SM, Dykes GA, Rahman S (2015) Public health risks of multiple-drug-resistant Enterococcus spp. in Southeast Asia. Appl Environ Microbiol 81(18):6090–6097. https://doi.org/10.1128/AEM.01741-15
Daniels NA, Shafaie AA (2000) Review of pathogenic vibrio infections for clinicians. Infect Med 17:665–685
Das A, Saha D, Pal J (2009) Antimicrobial resistance and in vitro gene transfer in bacteria isolated from the ulcers of EUS-affected fish in India. Lett Appl Microbiol 49:497–502. https://doi.org/10.1111/j.1472-765X.2009.02700.x
Davies J, Davies D (2010) Origins and evolution of antibiotic resistance. Microbio Mol Bio Rev 74(3):417–433. https://doi.org/10.1128/MMBR.00016-10
Denner EBM, Vybiral D, Fischer UR, Velimirov B, Busse HJ (2002) Vibrio calviensis sp. nov., a halophilic, facultatively oligotrophic 0.2 micron-filterable marine bacterium. Int J Syst Evol Microbiol 1(52):549–553. https://doi.org/10.1099/00207713-52-2-549
Devi R, Surendran PK, Chakraborty K (2009) Antibiotic resistance and plasmid profiling of Vibrio parahaemolyticus isolated from shrimp farms along the coast of India. World J Microbiol Biotechnol 25:2005–2012
Dhawde R, Macaden R, Saranath D, Nilgiriwala K, Ghadge A, Birdi T (2018) Antibiotic resistance characterization of environmental E. coli isolated from river Mula-Mutha, Pune District, India. Int J Environ Res Public Health 15:1–15. https://doi.org/10.3390/ijerph15061247
Divya SP, Hatha AAM (2019) Screening of tropical estuarine water in south-west coast of India reveals emergence of ARGs-harboring hypervirulent Escherichia coli of global significance. Int J Hyg Environ Health 222:235–248. https://doi.org/10.1016/j.ijheh.2018.11.002
Diwan V, Tamhankar AJ, Khandal RK, Sen S, Aggarwal M, Marothi Y, Iyer RV, Sundblad-Tonderski K, Stålsby-Lundborg C (2010) Antibiotics and antibiotic-resistant bacteria in waters associated with a hospital in Ujjain, India. BMC Public Health 10:414. https://doi.org/10.1186/1471-2458-10-414
Diwan V, Hanna N, Purohit M, Chandran S, Riggi E, Parashar V, Tamhankar AJ, Stålsby Lundborg C (2018) Seasonal variations in water-quality, antibiotic residues, resistant bacteria and antibiotic resistance genes of Escherichia coli isolates from water and sediments of the Kshipra River in Central India. Int J Environ Res Public Health 15(6):1281. https://doi.org/10.3390/ijerph15061281
Dolejska M, Cizek A, Literak I (2007) High prevalence of antimicrobial-resistant genes and integrons in Escherichia coli isolates from Black-headed Gulls in the Czech Republic. J Appl Microbiol 103:11–19. https://doi.org/10.1111/j.1365-2672.2006.03241.x
Dolejska M, Bierosova B, Kohoutova L, Literak I, Cizek A (2009) Antibiotic-resistant Salmonella and Escherichia coli isolates with integrons and extended-spectrum beta-lactamases in surface water and sympatric black-headed gulls. J Appl Microbiol 106:1941–1950. https://doi.org/10.1111/j.1365-2672.2009.04155.x
ESCMID (2019) Ecological study identifies potential association between antimicrobial resistance and climate change. European Society of Clinical Microbiology and Infectious Diseases. https://www.sciencedaily.com/releases/2019/04/190414111454.htm. Accessed 7 Nov 2019
Facklam RR, Carvalho MS, Teixeira LM (2002) History, taxonomy, biochemical characteristics, and antibiotic susceptibility testing of enterococci. In: Gilmore MS (ed) The Enterococci: pathogenesis, molecular biology, and antibiotic resistance. ASM Press, Washington, DC, pp 1–54
Fick J, Soderstrom H, Lindberg RH, Phan C, Tysklind M, Larsson DG (2009) Contamination of surface, ground, and drinking water from pharmaceutical production. Environ Toxicol Chem 28:2522–2527. https://doi.org/10.1897/09-073.1
Fischer MM, Bild M (2019) Hospital use of antibiotics as the main driver of infections with antibiotic-resistant bacteria—a reanalysis of recent data from the European Union. bioRxiv:553537. https://doi.org/10.1101/553537
Fluit AC, Schmitz FJ (2004) Resistance integrons and super-integrons. Clin. Microbiol. Infect. 10:272–288. https://doi.org/10.1111/j.1198-743X.2004.00858.x
Forsberg KJ, Reyes A, Wang B, Selleck EM, Sommer MOA, Dantas G (2012) The shared antibiotic resistome of soil bacteria and human pathogens. Science 337:1107–1111
Freitas MR, Freire NB, Peixoto LJS et al (2018) The presence of plasmids in Aeromonas hydrophila and its relationship with antimicrobial and heavy metal-resistance profiles. Ciencia Rural 48:9. https://doi.org/10.1590/0103-8478cr20170813
Gao P, Munir M, Xagoraraki I (2012) Correlation of tetracycline and sulfonamide antibiotics with corresponding resistance genes and resistant bacteria in a conventional municipal wastewater treatment plant. Sci Tot Environ 421:173–183. https://doi.org/10.1016/j.scitotenv.2012.01.061
Ghaderpour A, Ho WS, Chew LL, Bong CW, Chong VC, Thong KL, Chai LC (2015) Diverse and abundant multi-drug resistant E. coli in Matang mangrove estuaries, Malaysia. Front Microbiol 6:977. https://doi.org/10.3389/fmicb.2015.00977
Ghosh K, Mandal S (2010) Antibiotic resistant bacteria in consumable fishes from Digha coast, West Bengal, India. Proc Zool Soc 63(1):13–20
Gillings MR, Stokes HW (2012) Are humans increasing bacterial evolvability? Trends Ecol Evol 6:346–352. https://doi.org/10.1016/j.tree.2012.02.006
Goñi-Urriza M, Pineau P, Capdepuy M, Roques C, Caumette P, Quentin C (2000) Antimicrobial resistance of mesophilic Aeromonas spp. isolated from two European rivers. J Antimicrob Chemother 46:297–301. https://doi.org/10.1093/jac/46.2.297
Guerillot R, Li L, Baines S, Howden B, Schultz MB, Seemann T, Howden BP (2018) Comprehensive antibiotic-linked mutation assessment by resistance mutation sequencing (RM-seq). Genome Med 10:1–15. https://doi.org/10.1186/s13073-018-0572-z
Guillaume G, Verbrugge D, Chasseur-Libotte ML, Moens W, Collard JM (2000) PCR ty** of tetracycline resistance determinants (Tet A–E) in Salmonella enterica serotype Hadar and in the microbial community of activated sledges from hospital and urban wastewater treatment facilities in Belgium. FEMS MicrobEcol 32:77–85. https://doi.org/10.1111/j.1574-6941.2000.tb00701.x
Gullberg E, Albrecht LM, Karlsson C, Sandegren L, Andersson DI, Baquero F (2014) Selection of a multidrug resistance plasmid by sublethal levels of antibiotics and heavy metals. MBio 5(5).
Hadi U, van den Broek P, Kolopaking EP, Zairina N, Gardjito W, Gyssens IC (2010) Study Group Antimicrobial Resistance in Indonesia: prevalence and prevention (AMRIN). Cross-sectional study of availability and pharmaceutical quality of antibiotics requested with or without prescription (over the counter) in Surabaya, Indonesia. BMC Infect Dis 10:203. https://doi.org/10.1186/1471-2334-10-203
Hafez AEE, Darwish WS, Elbayomi RM et al (2018) Prevalence, antibiogram and molecular characterization of Aeromonas hydrophila isolated from frozen fish marketed in Egypt. Slov Vet Res 55:445–454. https://doi.org/10.26873/SVR-671-2018
Hammad AM, Moustafa AH, Mansour MM, Fahmy BM, Hamada MG, Shimamoto T, Shimamoto T (2018) Molecular and phenotypic analysis of hemolytic Aeromonas strains isolated from food in Egypt revealed clinically important multidrug resistance. Clini J food Prot 81:1015–1021. https://doi.org/10.4315/0362-028x.jfp-17-360
Han F, Walker RD, Janes ME, Prinyawiwatkul W, Ge B (2007) Antimicrobial susceptibilities of Vibrio parahaemolyticus and Vibrio vulnificus isolates from Louisiana Gulf and retail raw oysters. Appl Environ Microbiol 73:7096–7098. https://doi.org/10.1128/AEM.01116-07
Hansson K, Sundstrom L, Pelletier A, Roy PH (2002) IntI2 integron integrase in Tn7. J Bacteriol 184(6):1712–1721. https://doi.org/10.1128/JB.184.6.1712-1721.2002
Harnisz M, Korzeniewska E (2018) The prevalence of multidrug-resistant Aeromonas spp. in the municipal wastewater system and their dissemination in the environment. Sci Total Environ 626:377–383. https://doi.org/10.1016/J.SCITOTENV.2018.01.100
Harwood VJ, Whitlock J, Withington V (2000) Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: use in predicting the source of fecal contamination in subtropical waters. Appl Environ Microbiol 66(9):3698–3704. https://doi.org/10.1128/aem.66.9.3698-3704.2000
Hassan MM, Ahaduzzaman M, Alam M, Bari MS, Amin KB, Faruq AA (2015) Antimicrobial resistance pattern against E. coli and Salmonella spp. in environmental effluents. Int J Nat Sci 5(2):52–58. https://doi.org/10.3329/ijns.v5i2.28612
Hassard F, Gwyther CL, Farkas K, Andrews A, Jones V, Cox B, Brett H, Jones DL, McDonald JE, Malham SK (2016) Abundance and distribution of enteric bacteria and viruses in coastal and estuarine sediments—a review. Front Microbiol 7:1692. https://doi.org/10.3389/fmicb.2016.01692
Hatha AAM, Vivekanandhan G, Julie Joice G, Christol (2005) Antibiotic resistance pattern of motile aeromonads from farm raised fresh water fish. Int J Food Microbiol 98:131–134. https://doi.org/10.1016/j.ijfoodmicro.2004.05.017
Hatha AAM, Divya PS, Saramma AV et al (2013) Migratory bird, Branta leucopis (Barnacle goose), a potential carrier of diverse Escherichia coli serotypes into pristine arctic environment. Curr Sci 104:1078–1080
Hatha AAM, Neethu CS, Nikhil SM, Mujeeb Rahiman KM, Krishnan KP, Saramma AV (2015) Relatively high antibiotic resistance among heterotrophic bacteria from arctic fjord sediments than water—evidence towards better selection pressure in the fjord sediments. Polar Sci 9:382–388. https://doi.org/10.1016/j.polar.2015.10.002
Hendriksen RS, Munk P, Njage P, van Bunnik B, McNally L, Lukjancenko O, Röder T, Nieuwenhuijse D, Pedersen SK, Kjeldgaard J, Kaas RS, Clausen PTLC, Vogt JK, Leekitcharoenphon P, van de Schans MGM, Zuidema T, de Roda Husman AM, Rasmussen S, Petersen B et al (2019) Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage. Nat Commun 10:112. https://doi.org/10.1038/s41467-019-08853-3
Henriques IS, Fonseca F, Alves A, Saavedra MJ, Correia A (2006) Occurrence and diversity of integrons and β-lactamase genes among ampicillin-resistant isolates from estuarine waters. Res Microbiol 157:938–947. https://doi.org/10.1016/J.RESMIC.2006.09.003
Hossain S, Dahanayake PS, De Silva BCJ, Wickramanayake MVKS, Wimalasena SHMP, Heo GJ (2019) Multidrug resistant Aeromonas spp. isolated from zebrafish ( Danio rerio): antibiogram, antimicrobial resistance genes and class 1 integron gene cassettes. Lett Appl Microbiol 68:370–377. https://doi.org/10.1111/lam.13138
Huddleston JR, Zak JC, Jeter RM (2006) Antimicrobial susceptibilities of Aeromonas spp. isolated from environmental sources. Appl Environ Microbiol 72:7036–7042. https://doi.org/10.1128/AEM.00774-06
Huycke MM, Sahm DF, Gilmore MS (1998) Multiple-drug resistant enterococci: the nature of the problem and an agenda for future. Emerg Infect Dis 4:239–249. https://doi.org/10.3201/eid0402.980211
Igbinosa IH (2014) Antibiogram profiling and pathogenic status of Aeromonas species recovered from Chicken. Saudi J Biol Sci 21:481–485. https://doi.org/10.1016/j.sjbs.2014.06.003
Jagadeeshan S, Kumar P, Abraham WP, Thomas S (2009) Multi-resistant Vibrio cholerae non-O1/non-O139 from waters in South India: resistance patterns and virulence-associated gene profiles. J Basic Microbiol 49(6):538–544. https://doi.org/10.1002/jobm.200900085
John N, Hatha AAM (2012) Prevalence, distribution and drug resistance of motile aeromonads in freshwater ornamental fishes. Indian J Fish 59:161–164
John N, Hatha AAM (2013) Distribution, extracellular virulence factors and drug resistance of motile aeromonads in fresh water ornamental fishes and associated carriage water. Int J Aquac 3:92–100. https://doi.org/10.5376/ija.2013
Joseph AV, Sasidharan RS, Nair HP, Bhat SG (2013) Occurrence of potential pathogenic Aeromonas species in tropical seafood, aquafarms and mangroves off Cochin coast in South India. Vet World 6:300–306. https://doi.org/10.5455/vetworld.2013.300-306
Kanji A, Hasan R, Ali A, Zaver A, Zhang Y, Imtiaz K, Hasan Z (2017) Single nucleotide polymorphisms in efflux pumps genes in extensively drug resistant Mycobacterium tuberculosis isolates from Pakistan. Tuberculosis 107:20–30. https://doi.org/10.1016/j.tube.2017.07.012
Khan R, Shakya S, Chandrakar C, Pandey AK, Hattimare DD, Patyal A, Ali SL (2019) Isolation, identification and antimicrobial susceptibility pattern of extended-spectrum-β-lactamase Aeromonas spp. from fish samples of Chhattisgarh State, India. Int J Curr Microbiol Appl Sci 8:1011–1015
Kim J, Kang HY, Lee Y (2008) The identification of CTX-M-14, TEM-52, and CMY-1 enzymes in Escherichia coli isolated from the Han River in Korea. J Microbiol 46:478–481. https://doi.org/10.1007/s12275-008-0037-y
Kim KY, Park JH, Kwak HS, Woo GJ (2011) Characterization of the quinolone resistance mechanism in foodborne Salmonella isolates with high nalidixic acid resistance. Int J Food Microbiol 146:52–56. https://doi.org/10.1016/j.ijfoodmicro.2011.01.037
Kittinger C, Lipp M, Folli B, Kirschner A, Baumert R, Galler H, Grisold AJ, Luxner J, Weissenbacher M, Farnleitner AH, Zarfel G (2016) Enterobacteriaceae isolated from the River Danube: antibiotic resistances, with a focus on the presence of ESBL and carbapenemases. PLoS One 11:e0165820. https://doi.org/10.1371/journal.pone.0165820
Knapp CW, McCluskey SM, Singh BK, Campbell CD, Hudson G, Graham DW (2011) Basal antibiotic resistance gene abundances correlate with metal and Geochemical Conditions in Archived Scottish Soils. PLoS One 6(11):e27300. https://doi.org/10.1371/journal.pone.0027300
Kouyos RD, Abel Zur Wiesch P, Bonhoeffer S (2011) On being the right size: the impact of population size and stochastic effects on the evolution of drug resistance in hospitals and the community. PLoS Pathog 7:e1001334. https://doi.org/10.1371/journal.ppat.1001334
Krumperman PH (1983) Multiple antibiotic resistance indexing of Escherichia coli to identify high-risk source of fecal contamination of foods. Appl Environ Microbiol 46(1):165–170
Kumar HS, Parvathi A, Karunasagar I (2005) Prevalence and antibiotic resistance of Escherichia coli in tropical seafood. World J Microbiol Biotechnol 21:619–623. https://doi.org/10.1007/s11274-004-3555-8
Kumar R, Lalitha KV (2013) Prevalence and molecular characterization of Vibrio cholerae O1, non-O1 and non-O139 in tropical seafood in Cochin, India. Foodborne Pathog Dis 10(3):278–283. https://doi.org/10.1089/fpd.2012.1310
Kummerer K (2003) Significance of antibiotics in the environment. J Antimicrob Chemother 52:5–7. https://doi.org/10.1093/jac/dkg293
Kummerer K (2009) Antibiotics in the aquatic environment-a review—part I. Chemosphere. 75:417–434. https://doi.org/10.1016/j.chemosphere.2008.11.086
Laganà P, Caruso G, Corsi I, Bergami E, Venuti V, Majolino D, La Ferla R, Azzaro M, Cappello S (2019) Do plastics serve as a possible vector for the spread of antibiotic resistance? First insights from bacteria associated to a polystyrene piece from King George Island (Antarctica). Int J Hyg Environ Health 222:89–100. https://doi.org/10.1016/j.ijheh.2018.08.009
Lamba M, Ahammad SZ (2017) Sewage treatment effluents in Delhi: a key contributor of β-lactam resistant bacteria and genes to the environment. Chemosphere 188:249–256. https://doi.org/10.1016/j.chemosphere.2017.08.133
Laroche E, Pawlak B, Berthe T, Skurnik D, Petit F (2009) Occurrence of antibiotic resistance and class 1, 2 and 3 integrons in Escherichia coli isolated from a densely populated estuary (Seine, France). FEMS Microbiol Ecol 68:118–130. https://doi.org/10.1111/j.1574-6941.2009.00655.x
Lata P, Ram S, Agrawal M, Shanker R (2009) Real time PCR for the rapid detection of vanA gene in surface waters and aquatic macrophyte by molecular beacon probe. Environ Sci Technol 43(9):3343–3348. https://doi.org/10.1021/es803635y
Lata P, Ram S, Shanker R (2016) Multiplex PCR based genotypic characterization of pathogenic vancomycin resistant Enterococcus faecalis recovered from an indian river along a city landscape. Springerplus 5:1199. https://doi.org/10.1186/s40064-016-2870-5
Lauener FN, Imkamp F, Lehours P, Buissonnière A, Benejat L, Zbinden R, Keller PM, Wagner K (2019) Genetic determinants and prediction of antibiotic resistance phenotypes in Helicobacter pylori. J Clin Med 8:53. https://doi.org/10.3390/jcm8010053
Leclercq R (2009) Epidemiological and resistance issues in multi-drug resistant staphylococci and enterococci. Clin Microbiol Infect 15:224–231. https://doi.org/10.1111/j.1469-0691.2009.02739.x
Leonard AFC, Zhang L, Balfour AJ et al (2015) Human recreational exposure to antibiotic resistant bacteria in coastal bathing waters. Environ Int 82:92–100. https://doi.org/10.1016/j.envint.2015.02.013
Lerminiaux NA, Cameron ADS (2019) Horizontal transfer of antibiotic resistance genes in clinical environments. Can J Microbiol 65:34–44. https://doi.org/10.1139/cjm-2018-0275
Lesley M, Velnetti L, Cheah Y, Son R, Kasing A, Samuel L, Micky V, Nishibuchi M (2011) Antibiotic resistance and plasmid profiling of Vibrio parahaemolyticus isolated from cockles (Anadaragranosa) at TanjungKarang, Kuala Selangor. Int Food Res J 18:1183–1188
Letchumanan V, Yin WF, Lee LH, Chan KG (2015) Prevalence and antimicrobial susceptibility of Vibrio parahaemolyticus isolated from retail shrimps in Malaysia. Front Microbiol 6:33. https://doi.org/10.3389/fmicb.2015.00033
Leverstein-van Hall MA, MHE B, Rogier A, Donders T, Paauw A, Fluit AC, Verhoef J (2003) Multidrug resistance among Enterobacteriaceae is strongly associated with the presence of integrons and is independent of species or isolate origin. J Infect Dis 187:251–259. https://doi.org/10.1086/345880
Li R, Jay JA, Stenstrom MK (2019) Fate of antibiotic resistance genes and antibiotic-resistant bacteria in water resource recovery facilities. Water Environ Res 91:5–20. https://doi.org/10.1002/wer.1008
Lleo MDM, Bonato B, Benedetti D, Canepari P (2005) Survival of enterococcal species in aquatic environments. FEMS Microbiol Ecol 54:189–196. https://doi.org/10.1016/j.femsec.2005.03.016
Liu H, Whitehouse CA, Li B (2018) Presence and persistence of Salmonella in water: the impact on microbial quality of water and food safety. Front Public Health 6:1–13. https://doi.org/10.3389/fpubh.2018.00159
Lubbert C, Baars C, Dayakar A, Lippmann N, Rodloff AC, Kinzig M, Sorgel F (2017) Environmental pollution with antimicrobial agents from bulk drug manufacturing industries in Hyderabad, South India, is associated with dissemination of extended spectrum beta-lactamase and carbapenemase-producing pathogens. Infection 45:479–491
Lundborg CS, Tamhankar AJ (2017) Antibiotic residues in the environment of South East Asia. BMJ 358:42–45. https://doi.org/10.1136/bmj.j2440
Lupo A, Coyne S, Ulrich Berendonk T (2012) Origin and evolution of antibiotic resistance: the common mechanisms of emergence and spread in water bodies. Front Microbiol 3:18. https://doi.org/10.3389/fmicb.2012.00018
Ma L, Li AD, Yin XL, Zhang T (2017) The prevalence of integrons as the carrier of antibiotic resistance genes in natural and man-made environments. Environ Sci Technol 51:5721–5728. https://doi.org/10.1021/acs.est.6b05887
MacFadden DR, McGough SF, Fisman D, Santillana M, Brownstein JS (2018) Antibiotic resistance increases with local temperature. Nat Clim Chang 8:510–514. https://doi.org/10.1038/s41558-018-0161-6
Mahalmani VM, Sarma P, Prakash A, Medhi B (2019) Positive list of antibiotics and food products: current perspective in India and across the globe. Indian J Pharmacol 51:231–235. https://doi.org/10.4103/ijp.IJP_548_19
Mahmud AT, Tanim MT, Chowdhury MT, Rahaman MM, Rahman SR, Rahman MM (2019) Genetic diversity of Salmonella enterica strains isolated from sewage samples of different hospitals in Bangladesh. Bangladesh J Microbiol 35(1):57–60. https://doi.org/10.3329/bjm.v35i1.39804
Maloo A et al (2014) Occurrence and distribution of multiple antibiotic-resistant bacteria of Enterobacteriaceae family in waters of Veraval coast, India. Environ Exp Biol 12:43–50
Maloo A et al (2014) Occurrence and distribution of multiple antibiotic-resistant bacteria of Enterobacteriaceae family in waters of Veraval coast, India. Environ Exp Biol 12:43–50
Maloo A, Fulke AB, Mulani N, Sukumaran S, Ram A (2018) Pathogenic multiple antimicrobial resistant Escherichia coli serotypes in recreational waters of Mumbai, India: a potential public health risk. Environ Sci Pollut Res 24:11504–11517. https://doi.org/10.1007/s11356-017-8760-8
Manjusha S, Sarita GB, Elyas KK, Chandrasekaran M (2005) Multiple antibiotic resistances of Vibrio isolates from coastal and brackish water areas. Am J Biochem Biotechnol 1(4):201–206. https://doi.org/10.3844/ajbbsp.2005.193.198
Marathe NP, Regina VR, Walujkar SA et al (2013) A treatment plant receiving waste water from multiple bulk drug manufacturers is a reservoir for highly multi-drug resistant integron-bearing bacteria. PLoS One 8:2–11. https://doi.org/10.1371/journal.pone.0077310
Mariano V, McCrindle CME, Cenci-Goga B, Picard JA (2009) Case-control study to determine whether river water can spread tetracycline resistance to unexposed impala (Aepyceros melampus) in Kruger National Park (South Africa). Appl Environ Microbiol 75(1):113–118. https://doi.org/10.1128/AEM.01808-08
Marti E, Jofre J, Balcazar JL (2013) Prevalence of antibiotic resistance genes and bacterial community composition in a river influenced by a wastewater treatment plant. PLoS One 8(10):e78906. https://doi.org/10.1371/journal.pone.0078906
Martinez JL (2009) The role of natural environments in the evolution of resistance traits in pathogenic bacteria. Proc R Soc B 276:2521–2530. https://doi.org/10.1098/rspb.2009.0320
Martinez-Freijo P, Fluit AC, Schmitz FJ, Grek VS, Verhoef J, Jones ME (1998) Class I integrons in Gram-negative isolates from different European hospitals and association with decreased susceptibility to multiple antibiotic compounds. J Antimicrob Chemother 42:689–696. https://doi.org/10.1093/jac/42.6.689
Martinez-Martinez L, Pascual A, Jacoby GA (1998) Quinolone resistance from a transferable plasmid. Lancet 351:797–799. https://doi.org/10.1016/S0140-6736(97)07322-4
Mathews EB, Sunil B, Prejit N, Sunanda C, Vinod VK, Vergis J, Asha K, Sunitha R (2018) Occurrence and antibiotic susceptibility testing of Vibrio cholerae from district Wayanad, Kerala, India. Proc Natl Acad Sci India Sect B Biol Sci 88(2):673–678
Mazel D (2006) Integrons: agents of bacterial evolution. Nat Rev Microbiol 4:608–620. https://doi.org/10.1038/nrmicro1462
McCann CM, Christgen B, Roberts JA, Su JQ, Arnold KE, Gray ND, Zhu YG, Graham DW (2019) Understanding drivers of antibiotic resistance genes in High Arctic soil ecosystems. Environ Int 125:497–504. https://doi.org/10.1016/j.envint.2019.01.034
McEwen SA, Fedorka-Cray PJ (2000) Antimicrobial use and resistance in animals. Clin Infect Dis 34:S93–S106. https://doi.org/10.1086/340246
Mehla K, Ramana J (2015) DBDiaSNP: an open-source knowledgebase of genetic polymorphisms and resistance genes related to diarrheal pathogens. Omi A J Integr Biol 19:354–360. https://doi.org/10.1089/omi.2015.0030
Miller RV, Gammon K, Day MJ (2009) Antibiotic resistance among bacteria isolated from seawater and penguin fecal samples collected near Palmer Station, Antarctica. Can J Microbiol 55:37–45. https://doi.org/10.1139/W08-119
Mohamed Hatha AA, Divya PS, Saramma A V., et al. (2013) Migratory bird, Branta leucopis (Barnacle goose), a potential carrier of diverse Escherichia coli serotypes into pristine arctic environment. Curr Sci 104:1078–1080
Mookerjee S, Batabyal P, Sarkar MH, Palit A (2015) Seasonal prevalence of enteropathogenic Vibrio and their phages in the riverine estuarine ecosystem of South Bengal. PLoS One 10(9):e0137338. https://doi.org/10.1371/journal.pone.0137338
Moore DF, Guzman JA, McGee C (2008) Species distribution and antimicrobial resistance of enterococci isolated from surface and ocean water. J Appl Microbiol 105:1017–1025. https://doi.org/10.1111/j.1365-2672.2008.03828.x
Mutiyar PK, Mittal AK (2014) Risk assessment of antibiotic residues in different water matrices in India: key issues and challenges. Environ Sci Pollut Res 21:7723–7736. https://doi.org/10.1007/s11356-014-2702-5
Nair A (2019) Strengthening strategies to tackle salmonellosis, antimicrobial resistance and sanitation crisis. Curr Sci 116:9
Nataro JP, Kaper JB (1998) Diarrheagenic Escherichia coli. Clin Microbiol Rev 11:142–201
Neethu CS, Rahiman KMM, Saramma AV, Hatha AAM (2015) Heavy-metal resistance in gram-negative bacteria isolated from Kongsfjord, Arctic. Can J Microbiol 61:429–435. https://doi.org/10.1139/cjm-2014-0803
Ng C, Chen H, Goh SG, Haller L, Wu Z, Charles FR, Trottet A, Gin K (2018) Microbial water quality and the detection of multidrug resistant E. coli and antibiotic resistance genes in aquaculture sites of Singapore. Mar Pollut Bull 135:475–480. https://doi.org/10.1016/j.marpolbul.2018.07.055
Niero G, Bortolaia V, Vanni M, Intorre L, Guardabassi L, Piccirillo A (2018) High diversity of genes and plasmids encoding resistance to third-generation cephalosporins and quinolones in clinical Escherichia coli from commercial poultry flocks in Italy. Vet Microbiol 216:93–98. https://doi.org/10.1016/j.vetmic.2018.02.012
Odeyemi OA, Ahmad A (2017) Antibiotic resistance profiling and phenoty** of Aeromonas species isolated from aquatic sources. Saudi J Biol Sci 24:65–70. https://doi.org/10.1016/j.sjbs.2015.09.016
Okada N, Matsuda S, Matsuyama J et al (2010) Presence of genes for type III secretion system 2 in Vibrio mimicus strains. BMC Microbiol 10:302. https://doi.org/10.1186/1471-2180-10-302
Olaniran AO, Naicker K, Pillay B (2009) Antibiotic resistance profiles of Escherichia coli isolates from river sources in Durban, South Africa. World J Microbiol Biotechnol 25:1743–1749. https://doi.org/10.1007/s11274-009-0071-x
Oliver JD, Pruzzo C, Vezzulli L, Kaper JB (2013) Vibrio species. In: Doyle MP, Buchanan RL (eds) Food microbiology: fundamentals and frontiers, 4th edn. ASM, Washington, pp 401–440
Ottaviani D, Leoni F, Talevi G, Masini L, Santarelli S, Rocchegiani E, Susini F, Montagna C, Monno R, D'Annibale L, Manso E, Oliva M, Pazzani C (2013) Extensive investigation of antimicrobial resistance in Vibrio parahaemolyticus from shellfish and clinical sources, Italy. Int J Antimicrob Agents 42:191–193. https://doi.org/10.1016/j.ijantimicag.2013.05.003
Parvathi A, Mendez D, Anto C (2011) Distribution of putative virulence genes and antimicrobial drug resistance in Vibrio harveyi. Ind J Microbiol 51(3):332–337. https://doi.org/10.1007/s12088-011-0128-z
Patil HJ, Benet-Perelberg A, Naor A, Smirnov M, Ofek T, Nasser A, Minz D, Cytryn E (2016) Evidence of increased antibiotic resistance in phylogenetically-diverse Aeromonas isolates from semi-intensive fish ponds treated with antibiotics. Front Microbiol 7:1875. https://doi.org/10.3389/fmicb.2016.01875
Pereira A, Santos A, Tacao M, Alves A, Henriques I, Correia A (2013) Genetic diversity and antimicrobial resistance of Escherichia coli from Tagus estuary (Portugal). Sci Total Environ 461–462:65–71. https://doi.org/10.1016/j.scitotenv.2013.04.067
Phan MD, Wain JJ (2008) IncHI plasmids, a dynamic link between resistance and pathogenicity. Infect Dev Countr 2(4):272–278. https://doi.org/10.3855/jidc.221
Poonia S, Singh TS, Tsering DC (2014) Antibiotic susceptibility profile of bacteria isolated from natural sources of water from rural areas of East Sikkim. Indian J Community Med Indian Assoc Prev Soc Med 39(3):156
Quiroga MP, Andres P, Petroni A, Soler Bistue AJ, Guerriero L, Vargas LJ, Zorreguieta A, Tokumoto M, Quiroga C, Tolmasky ME, Galas M, Centron D (2007) Complex class 1 integrons with diverse variable regions, including aac(6’)-Ib-cr, and a novel allele, qnrB10, associated with ISCR1 in clinical enterobacterial isolates from Argentina. Antimicrob Agents Chemother 51:4466–4470. https://doi.org/10.1128/AAC.00726-07
Quiroga MP, Orman B, Errecalde L, Kaufman S, Centron D (2015) Characterization of Tn6238 with a new allele of aac(6′)-Ib-cr. Antimicrob Agents Chemother 59:2893–2897. https://doi.org/10.1128/AAC.03213-14
Ram S, Vajpayee P, Shanker R (2007) Prevalence of multi-antimicrobial-agent resistant shiga toxin and enterotoxin producing Escherichia coli in surface waters of river Ganga. Environ Sci Technol 41:7383–7388. https://doi.org/10.1021/es0712266
Ramanathan B, **dal HM, Le CF, Gudimella R, Anwar A, Razali R, Sekaran SD (2017) Next generation sequencing reveals the antibiotic resistant variants in the genome of Pseudomonas aeruginosa. PLoS One 12:1–15. https://doi.org/10.1371/journal.pone.0182524
Rawal I, Joshi H, Chaudhary BL (2016) Isolation, identification, and antibiotics resistance of Aeromonas spp. from lakes of Udaipur (Rajasthan), India. Asian J Pharm 10:132–136. https://doi.org/10.22377/ajp.v10i2.612
Reyhanath PV, Kutty R (2014) Incidence of multidrug resistant Vibrio parahaemolyticus isolated from Ponnani, South India. Iran J Microbiol 6(2):60–67. https://www.ncbi.nlm.nih.gov/pubmed/25705353
Rizzo L, Manaia C, Merlin C, Schwartz T, Dagot C, Ploy MC, Michael I, Fatta-Kassinos D (2013) Urban wastewater treatment plants as hotspots for antibiotic resistant bacteria and genes spread into the environment: a review. Sci Total Environ 447:345–360
Rizzotti L, La Gioia F, Dellaglio F, Torriani S (2009) Molecular diversity and transferability of the tetracycline resistance gene tet(M), carried on Tn916-1545 family transposons, in enterococci from a total food chain. Antonie van Leeuwenhoek 96:43–52. https://doi.org/10.1007/s10482-009-9334-7
Rodgers K, McLellan I, Peshkur T, Williams R, Tonner R, Hursthouse AS, Knapp CW, Henriquez FL (2019) Can the legacy of industrial pollution influence antimicrobial resistance in estuarine sediments? Environ Chem Lett 17:595–607. https://doi.org/10.1007/s10311-018-0791-y
Rodriguez-Mozaz S, Chamorro S, Marti E, Huerta B, Gros M, Sà nchez-Melsió A, Borrego CM, Barceló D, Jose Balcazar JL (2015) Occurrence of antibiotics and antibiotic resistance genes in hospital and urban wastewaters and their impact on the receiving river. Water Res 69:234–242. https://doi.org/10.1016/j.watres.2014.11.021
Russo TA, Johnson JR (2000) Proposal for a new inclusive designation for extraintestinal pathogenic isolates of Escherichia coli: ExPEC. J Infect Dis 181:1753–1754. https://doi.org/10.1086/315418
Sabri NA, Schmitt H, Van der Zaan B, Gerritsen HW, Zuidema T, Rijnaarts HHM, Langenhoff AAM (2018) Prevalence of antibiotics and antibiotic resistance genes in a wastewater effluent-receiving river in the Netherlands. J Environ Chem Eng. https://doi.org/10.1016/j.jece.2018.03.004
Sahu R, Saxena P. Antibiotics in chicken meat (2014) PML/PR-48/2014. New Delhi, India: Centre for Science and Environment, Centre for Science and Environment, India. Available from https://cdn.cseindia.org/userfiles/Antibiotics%20in%20Chicken_Lab%20Report_Final%2029%20July.pdf.
Sathiyamurthy K, Purushothaman A, Ramaiyan V (1997) Antibiotic-resistant in Parangipettai coastal environs, South East India. Microb Drug Resist 3(3):267–270
Sathiyamurthy K, Purushothaman A, Ramaiyan V (1997) Antibiotic-resistant Vibrio cholerae in parangipettai coastal environs, South East India. Microb Drug Resist 3(3):267(70). https://doi.org/10.1089/mdr.1997.3.267
Schmidt AS, Bruun MS, Dalsgaard I, Pedersen K, Larsen JL (2000) Occurrence of antimicrobial resistance in fish-pathogenic and environmental bacteria associated with four Danish rainbow trout farms. Appl Environ Microbiol 66:4908–4915. https://doi.org/10.1128/aem.66.11.4908-4915.2000
Scott KP (2002) The role of conjugative transposons in spreading antibiotic resistance between bacteria that inhabit the gastrointestinal tract. Cell Mol Life Sci 59:2071–2082. https://doi.org/10.1007/s000180200007
Sharma A, Bora CR, Chaurasia RK, Sahu V (2009) Antibiotic susceptibility and genetic analysis of Vibrio species isolated from riverine environment. Curr Res Bacteriol 2:36–49
Shaw KS, Rosenberg Goldstein RE, He X, Jacobs JM, Crump BC, Sapkota AR (2014) Antimicrobial susceptibility of Vibrio vulnificus and Vibrio parahaemolyticus recovered from recreational and commercial areas of Cheaspeake Bay and Maryland coastal bay. PLoS One 9:e89616. https://doi.org/10.1371/journal.pone.0089616
Siddiqui Md K, Khatoon N, Roy PC (2016) Untreated liquid hospital waste: potential source of multidrug resistant bacteria. Bangladesh J Microbiol 32(1–2):21–24
Silbergeld EK, Graham J, Price LB (2008) Industrial food animal production, antimicrobial resistance, and human health. Annu Rev Public Health 29:151–169. https://doi.org/10.1146/annurev.publhealth.29.020907.090904
Silva CM, Evangelista-Barreto NS, RHSDF V, Mendonça KV, Sousa OV (2014) Population dynamics and antimicrobial susceptibility of Aeromonas spp. along a salinity gradient in an urban estuary in Northeastern Brazil. Mar Pollut Bull 89:96–101. https://doi.org/10.1016/J.MARPOLBUL.2014.10.031
Silvester R, Alexander D, Hatha AAM (2015) Prevalence, antibiotic resistance, virulence and plasmid profiles of Vibrio parahaemolyticus from a tropical estuary and adjoining traditional prawn farms along the south west coast of India. Ann Microbiol 65:2141–2149. https://doi.org/10.1007/s13213-015-1053-x
Singer AC, Shaw H, Rhodes V, Hart A (2016) Review of antimicrobial resistance in the environment and its relevance to environmental regulators. Front Microbiol 7:1–22. https://doi.org/10.3389/fmicb.2016.01728
Singh AS, Lekshmi M, Prakasan S, Nayak BB (2017) Multiple antibiotic-resistant, extended Spectrum-β-Lactamase (ESBL)-producing Enterobacteria in fresh seafood. Microorganisms 5:53. https://doi.org/10.3390/microorganisms5030053
Sjolund M, Bonnedahl J, Hernandez J, Bengtsson S, Cederbrant G, Pinhassi J, Kahlmeter G, Olsen B (2008) Dissemination of multidrug-resistant bacteria into the Arctic. Emerg Infect Dis 14:70–72. https://doi.org/10.3201/eid1401.070704
Skariyachan S, Mahajanakatti AB, Grandhi NJ, Prasanna A, Sen B, Sharma N, Vasist KS, Narayanappa R (2015) Environmental monitoring of bacterial contamination and antibiotic resistance patterns of the fecal coliforms isolated from Cauvery River, a major drinking water source in Karnataka, India. Environ Monit Assess 187:279. https://doi.org/10.1007/s10661-015-4488-4
Sneha KG, Anas A, Jayalakshmy KV, Jasmin C, Vipin Das PV, Pai SS, Pappu S, Nair M, Muraleedharan KR, Sudheesh K, Nair S (2016) Distribution of multiple antibiotic resistant Vibrio spp across Palk Bay. Reg Stud Mar Sci 3:242–250. https://doi.org/10.1016/j.rsma.2015.11.004
Ramasamy P, Srinivasan P (2009) Occurrence, distribution and antibiotic resistance patterns of Vibrio species associated with viral diseased shrimp of South Indian aquaculture environment. Int J Agric Sci 1(2):1–10
Stalin N, Srinivasan P (2016) Molecular characterization of antibiotic resistant Vibrio harveyi isolated from shrimp aquaculture environment in the south east coast of India. Microb Pathog 97:110–118. https://doi.org/10.1016/j.micpath.2016.05.021
Stokes HW, Elbourne LD, Hall RM (2007) Tn1403, a multiple-antibiotic resistance transposon made up of three distinct transposons. Antimicrob Agents Chemother 51:1827–1829. https://doi.org/10.1128/AAC.01279-06
Sudha S, Mridhula C, Silvester R, Hatha AAM (2014) Prevalence and antibiotic resistance of pathogenic Vibrios in shellfishes from Cochin market. Indian J Geo Marine Sci 43(5):815–824
Suhartono S, Savin M, Gbur EE (2016) Genetic redundancy and persistence of plasmid-mediated trimethoprim/sulfamethoxazole resistant effluent and stream water Escherichia coli. Water Res 103:197–204. https://doi.org/10.1016/j.watres.2016.07.035
Tanil GB, Radu S, Nishibuchi M, Rahim RA (2005) Characterization of Vibrio parahaemolyticus isolated from coastal seawater in peninsular Malaysia. Southeast Asian J Trop Med Public Health 36(4):940
Thakur AB, Vaidya RB, Suryawanshi SA (2003) Pathogenicity and antibiotic susceptibility of Vibrio species isolated from moribund shrimps. IJMS 32(1):71–75
Thayumanavan SR, Vivekanandhan G, Savithamani K, Lakshmanaperumalsamy P (2007) Haemolytic and multidrug resistant Aeromonas hydrophila cross contamination in retail seafood outlets of Coimbatore, South India. Am J Food Technol:87–94. https://doi.org/10.3923/ajft.2007.87.94
Thomas CM (1973) Paradigms of plasmid organization. Mol Microbiol 74:335–337
Thungapathra M, Amita SKK, Chaudhuri SR, Garg P, Ramamurthy T, Nair GB, Ghosh A (2002) Occurrence of antibiotic resistance gene cassettes aac(6′)-Ib, dfrA5, dfrA12, and ereA2 in Class I integrons in non-O1, non-O139 Vibrio cholerae strains in India. Antimicrob Agents Chemother 46(9):2948–2955. https://doi.org/10.1128/AAC.46.9.2948-2955.2002
Van SW, Willems RJ (2010) Genome-based insights into the evolution of Enterococci. Clin Microbiol Infect 16:527–532. https://doi.org/10.1111/j.1469-0691.2010.03201.x
Vaseeharan B, Ramasamy P, Murugan T, Chen JC (2005) In vitro susceptibility of antibiotics against Vibrio spp. and Aeromonas spp. isolated from Penaeus monodon hatcheries and ponds. Int J Antimicrob Agents 26:285–291. https://doi.org/10.1016/j.ijantimicag.2005.07.005
Velappan M, Munusamy D (2019) In vitro susceptibility of commonly used antibiotics against Vibrio parahaemolyticus, isolated from Finfishes, Chennai, India. J Infec Dis Treat 5(1):1
Vignaroli C, Pasquaroli S, Citterio B, Di Cesare A, Mangiaterra G, Fattorini D, Biavasco F (2018) Antibiotic and heavy metal resistance in Enterococci from coastal marine sediment. Environ Pollut 237:406–413. https://doi.org/10.1016/j.envpol.2018.02.073
Vignesh S, Muthukumar K, James RA (2012) Antibiotic resistant pathogens versus human impacts: a study from three eco-regions of the Chennai coast, southern India. Mar Pollut Bull 64:790–800. https://doi.org/10.1016/j.marpolbul.2012.01.015
Vikesland P, Garner E, Gupta S, Kang S, Maile-Moskowitz A, Zhu N (2019) Differential drivers of antimicrobial resistance across the World. Acc Chem Res 52:916–924. https://doi.org/10.1021/acs.accounts.8b00643
Vivekanandhan G, Savithamani K, Hatha AAM, Lakshmanaperumalsamy P (2002) Antibiotic resistance of Aeromonas hydrophila isolated from marketed fish and prawn of South India. Int J Food Microbiol 76:165–168. https://doi.org/10.1016/S0168-1605(02)00009-0
Walsh TR, Weeks J, Livermore DM, Toleman MA (2011) Dissemination of NDM-1 positive bacteria in the New Delhi environment and its implications for human health: an environmental point prevalence study. Lancet Infect Dis 11:355–362
Wang F, Stedtfeld RD, Kim OS et al (2016) Influence of soil characteristics and proximity to antarctic research stations on abundance of antibiotic resistance genes in soils. Environ Sci Technol 50(23):12621–12629
Warnes SL, Highmore CJ, Keevil CW (2012) Horizontal transfer of antibiotic resistance genes on abiotic touch surfaces: implications for public health. mBio 3:e00489-12. https://doi.org/10.1128/mBio.00489-12
WaterAid India (2016) An assessment of faecal sludge management policies and programmes at the national and select states level. WaterAid Report. http://wateraidindia.in/wpcontent/uploads/2016/01/Faecal-SludgeManagement-Report.pdf
WHO (World Health Organization) (2015) One health policy. WHO, Geneva. http://www.euro.who.int/en/health-topics/disease-prevention/antimicrobial-resistance/about-amr/one-health
WHO (World Health Organization) (2017) Global antimicrobial resistance surveillance system (GLASS) report early implementation. WHO, Geneva
Wiedemann A, Virlogeux-Payant I, Chausse AM, Schikora A, Velge P (2015) Interactions of Salmonella with animals and plants. Front Microbiol 5:791. https://doi.org/10.3389/fmicb.2014.00791
Woolhouse M, Ward M, Van Bunnik B, Farrar J (2015) Antimicrobial resistance in humans, livestock and the wider environment. Philos Trans R Soc Lond B Biol Sci 370(1670):20140083. https://doi.org/10.1098/rstb.2014.0083
Yang Q, Zhao M, Wang KY, Wang J, He Y, Wang EL, Liu T, Chen DF, Lai W (2017) Multidrug-resistant Aeromonas veronii recovered from Channel Catfish (Ictalurus punctatus ) in China: prevalence and mechanisms of fluoroquinolone resistance. Microb Drug Resist 23:473–479. https://doi.org/10.1089/mdr.2015.0296
Yano Y, Hamano K, Satomi M, Tsutsui I, Ban M, Aue-Umneoy D (2014) Prevalence and antimicrobial susceptibility of Vibrio species related to food safety isolated from shrimp cultured at inland ponds in Thailand. Food Control 38:30–45. https://doi.org/10.1016/j.foodcont.2013.09.019
Yao Z, Li W, Lin Y, Wu Q, Yu F, Lin W, Lin X (2016) Proteomic analysis reveals that metabolic flows affect the susceptibility of Aeromonas hydrophila to antibiotics. Sci Rep 6:1–10. https://doi.org/10.1038/srep39413
Yousfi M, Mairi A, Touati A, Hassissene L, Brasme L, Guillard T, De Champs C (2016) Extended spectrum β -lactamase and plasmid mediated quinolone resistance in Escherichia coli fecal isolates from healthy companion animals in Algeria. J Infect Chemother 22:431–435. https://doi.org/10.1016/j.jiac.2016.03.005
Zarfel G, Lipp M, Gürtl E et al (2017) Troubled water under the bridge: screening of River Mur water reveals dominance of CTX-M harboring Escherichia coli and for the first time an environmental VIM-1 producer in Austria. Sci Total Environ 593–594:399–405. https://doi.org/10.1016/j.scitotenv.2017.03.138
Zhang SH, Lv X, Han B et al (2015) Prevalence of antibiotic resistance genes in antibiotic-resistant Escherichia coli isolates in surface water of Taihu Lake Basin, China. Environ Sci Pollut Res 22:11412–11421. https://doi.org/10.1007/s11356-015-4371-4
Zhang G, Zhang Y, Wang H, Xu L, Lv L (2018) Comparative genomic analysis of five high drug-resistance Aeromonas hydrophila strains induced by doxycycline in laboratory and nine reference strains in Genbank. Aquac Res 49:2553–2559. https://doi.org/10.1111/are.13717
Zhou H, Smith DW (2002) Advanced technologies in water and wastewater treatment. J Environ Engin Sci 1:247–264. https://doi.org/10.1139/s02-020
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Mohamed Hatha, A.A., Divya, P.S., Reshma, S., Nifty, J. (2020). Polluted Coastal and Estuarine Environments: A Potential Reservoir for AMR Determinants in Various Pathogenic Bacteria. In: Thomas, S. (eds) Antimicrobial Resistance. Springer, Singapore. https://doi.org/10.1007/978-981-15-3658-8_5
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