Genetics and Breeding

  • Chapter
  • First Online:
The Globe Artichoke Genome

Part of the book series: Compendium of Plant Genomes ((CPG))

  • 388 Accesses

Abstract

Genetic variation within globe artichoke landraces contributes to the variable yield performance detected in cultivation. It was built up over many generations of vegetative propagation as a consequence of the limited selection applied by farmers as well as the accumulation of mutations. This chapter reports the results obtained by applying clonal selection programmes within local landraces, with the goal to identify genotypes retaining desirable traits and able to ensure a higher and stable yield. The selected high-yielding genotypes while contributing to increase productivity may also implement the conservation ‘in situ’ of valuable germplasm at risk of extinction. With the goal to move to breeding programme based on crossing strategies, it is pivotal the development of genetic maps with high levels of genome coverage. Genetic maps represent the first step for localizing genes or quantitative trait loci (QTL) that are associated with economically important trait and open the way for marker-assisted selection, comparative map** between different species, a framework for anchoring physical maps and the basis for map-based cloning of genes. In this chapter, the history of the development of genetic maps in Cynara cardunculus is retraced, starting from the first maps based on a limited number of mostly dominant molecular markers, up to the most recently developed maps allowing the identification of genomic region influencing key agronomic traits.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
EUR 32.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or Ebook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free ship** worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free ship** worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  • Acquadro A, Lanteri S, Scaglione D, Arens P, Vosman B, Portis E (2009) Genetic map** and annotation of genomic microsatellites isolated from globe artichoke. Theor Appl Genet 118:1573–1587

    Article  CAS  Google Scholar 

  • Basnitzki J, Zohary D (1994) Breeding of seed planted artichoke. Plant Breed Rev 12:253–269

    Google Scholar 

  • Brown GR, Bassoni DL, Gill GP, Fontana JR, Wheeler NC, Megraw RA, Davis MF, Sewell MM, Tuskan GA, Neale DB (2003) Identification of quantitative trait loci influencing wood property traits in loblolly pine (Pinus taeda L.). III. QTL verification and candidate gene map**. Genetics 164:1537–1546

    PubMed  PubMed Central  CAS  Google Scholar 

  • Carter AH, Garland-Campbell K, Kidwell KK (2011) Genetic map** of quantitative trait loci associated with important agronomic traits in the spring wheat (Triticum aestivum L.) cross ‘Louise’ × ‘Penawawa’. Crop Sci 51:84–95

    Article  Google Scholar 

  • Ciancolini A, Rey NA, Pagnotta MA, Crinò P (2012) Characterization of Italian spring globe artichoke germplasm: morphological and molecular profiles. Euphytica 186:433–443

    Article  CAS  Google Scholar 

  • Comino C, Hehn A, Moglia A, Menin B, Bourgaud F, Lanteri S, Portis E (2009) The isolation and map** of a novel hydroxycinnamoyltransferase in the globe artichoke chlorogenic acid pathway. BMC Plant Biol 9:30

    Article  CAS  Google Scholar 

  • Comino C, Lanteri S, Portis E, Acquadro A, Romani A, Hehn A, Larbat R, Bourgaud F (2007) Isolation and functional characterization of a cDNA coding a hydroxycinnamoyltransferase involved in phenylpropanoid biosynthesis in Cynara cardunculus L. BMC Plant Biol 7:14

    Article  CAS  Google Scholar 

  • Cravero V, Martin E, Cointry E (2007) Genetic diversity in Cynara cardunculus determined by sequence-related amplified polymorphism markers. J Amer Soc Hort Sci 132:1–5

    Article  Google Scholar 

  • Cravero V, Picardi L, Cointry E (2005) An approach for understanding the heredity of two quality traits (head color and tightness) in globe artichoke (Cynara scolymus L.). Genet Mol Biol 28:431–434

    Article  Google Scholar 

  • Crinò P, Pagnotta MA (2017) Phenoty**, genoty**, and selections within Italian local landraces of Romanesco globe artichoke. Diversity 9:14

    Article  CAS  Google Scholar 

  • Crinò P, Tavazza R, Rey Muñoz NA, Trionfetti Nisini P, Saccardo F, Ancora G, Pagnotta MA (2008) Recovery, morphological and molecular characterisation of globe artichoke ‘Romanesco’ landraces. Genet Resour Crop Evol 55:823–833

    Article  Google Scholar 

  • Holland JB (2006) Estimating genotypic correlations and their standard errors using multivariate restricted maximum likelihood estimation with SAS Proc MIXED. Crop Sci 46:642–654

    Article  Google Scholar 

  • Lanteri S, Acquadro A, Comino C, Mauro R, Mauromicale G, Portis E (2006) A first linkage map of globe artichoke (Cynara cardunculus var. scolymus L.) based on AFLP, S-SAP, M-AFLP and microsatellite markers. Theor Appl Genet 112:1532–1542

    Article  CAS  Google Scholar 

  • Lanteri S, Ledda L, Di Leo I, Mameli MG, Portis E (2005) Molecular and morphological variation among and within populations of Cynara scolymus L. cv. ‘Spinoso sardo’. Acta Hortic 681:333–340

    Article  CAS  Google Scholar 

  • Lanteri S, Portis E, Acquadro A, Mauro RP, Mauromicale G (2012) Morphology and SSR fingerprinting of newly developed Cynara cardunculus genotypes exploitable as ornamentals. Euphytica 184:311–321

    Article  CAS  Google Scholar 

  • Lanteri S, Acquadro A, Saba E, Portis E (2004) Molecular fingerprinting and evaluation of genetic distances among selected clones of globe artichoke (Cynara cardunculus L. var. scolymus L.) ‘Spinoso sardo’. J Hortic Sci Biotech 79:863–870

    Article  CAS  Google Scholar 

  • Lanteri S, Di Leo I, Ledda M, Mameli M, Portis E (2001) RAPD, variation within and among populations of globe artichoke (Cynara scolymus L.), cv ‘Spinoso sardo’. Plant Breed 120:243–246

    Article  CAS  Google Scholar 

  • Lopez Anido F, Firpo I, Garcia S, Cointry E (1998) Estimation of genetic parameters for yield traits in globe artichoke (Cynara scolymus L.). Euphytica 103:61–66

    Article  Google Scholar 

  • Martin E, Cravero V, Portis E, Scaglione D, Acquaviva E, Cointry E (2013) New genetic maps for globe artichoke and wild cardoon and their alignment with an SSR-based consensus map. Mol Breed 32:177–187

    Article  CAS  Google Scholar 

  • Martin EA, Cravero VP, Cointry EL (2016a) Quantitative trait loci (QTLs) related to biomass production in Cynara cardunculus L. Acta Hortic 1147:189–196

    Article  Google Scholar 

  • Martin EA, Cravero VP, López Anido FS, Cointry EL (2016b) QTLs detection and map** for yield-related traits in globe artichoke. Sci Hortic 202:156–164

    Article  Google Scholar 

  • Mauro R, Portis E, Acquadro A, Lombardo S, Mauromicale G, Lanteri S (2009) Genetic diversity of globe artichoke landraces from Sicilian small-holdings: implications for evolution and domestication of the species. Conserv Genet 10:431–440

    Article  Google Scholar 

  • Mauro R, Portis E, Lanteri S, Lo Monaco A, Mauromicale G (2015) Clonal selection in a globe artichoke landrace: characterization of superior germplasm to improve cultivation in Mediterranean environment. J Agric Sci 153:102–113

    Article  Google Scholar 

  • Mauro R, Portis E, Lanteri S, Mauromicale G (2012) Genotypic and bio-agronomical characterization of an early Sicilian landraces of globe artichoke. Euphytica 186:357–366

    Article  CAS  Google Scholar 

  • Mauromicale G, Portis E, Acquadro A, Lo Monaco A, Pesce GR, Lanteri S (2018) An integrated model to accelerate the development of seed-propagated varieties of globe artichoke. Crop Breed Appl Biotechnol 18:72–80

    Article  CAS  Google Scholar 

  • Menin B, Comino C, Moglia A, Dolzhenko Y, Portis E, Lanteri S (2010) Identification and map** of genes related to caffeoylquinic acid synthesis in Cynara cardunculus L. Plant Sci 179:338–347

    Article  CAS  Google Scholar 

  • Moglia A, Comino C, Portis E, Acquadro A, De Vos R, Beekwilder J, Lanteri S (2009) Isolation and map** of a C3’H gene (CYP98A49) from globe artichoke, and its expression upon UV-C stress. Plant Cell Rep 28:963–974

    Article  CAS  Google Scholar 

  • Pandino G, Lombardo S, Moglia A, Portis E, Lanteri S, Mauromicale G (2015) Leaf polyphenol profile and SSR-based fingerprinting of new segregant Cynara cardunculus genotypes. Front Plant Sci 5:800

    Article  Google Scholar 

  • Pochard E, Foury C, Chambonet D (1969) Il miglioramento genetico del carciofo. Proceedings 1° Congresso Internazionale sul carciofo. Bari, Italy, pp 117–155

    Google Scholar 

  • Portis E, Acquadro A, Scaglione D, Mauromicale G, Mauro R, Taylor CA, Knapp SJ, Lanteri S (2009b) Construction of an SSR-based linkage map for Cynara cardunculus. In: Proceeding of the 8th Plant Genomics European Meeting, p 142

    Google Scholar 

  • Portis E, Mauro RP, Acquadro A, Moglia A, Mauromicale G, Lanteri S (2015) The inheritance of bract pigmentation and fleshy thorns on the globe artichoke capitulum. Euphytica 206:523–531

    Article  Google Scholar 

  • Portis E, Mauro RP, Barchi L, Acquadro A, Mauromicale G, Lanteri S (2014) Map** yield-associated trait QTL in globe artichoke. Mol Breed 34:615–630

    Article  Google Scholar 

  • Portis E, Mauromicale G, Barchi L, Mauro R, Lanteri S (2005) Population structure and genetic variation in autochthonous globe artichoke germplasm from Sicily Island. Plant Sci 168:1591–1598

    Article  CAS  Google Scholar 

  • Portis E, Mauromicale G, Mauro R, Acquadro A, Scaglione D, Lanteri S (2009a) Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus). Theor Appl Genet 120:59–70

    Article  CAS  Google Scholar 

  • Portis E, Scaglione D, Acquadro A, Mauromicale G, Mauro R, Knapp S, Lanteri S (2012) Genetic map** and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex. BMC Res Notes 5:252

    Article  CAS  Google Scholar 

  • Portis E, Acquadro A, Tirone M, Pesce GR, Mauromicale G, Lanteri S (2018) Map** the genomic regions encoding biomass-related traits in Cynara cardunculus L. Mol Breed 38:64

    Article  CAS  Google Scholar 

  • Scaglione D, Acquadro A, Portis E, Taylor CA, Lanteri S, Knapp SJ (2009) Ontology and diversity of transcript-associated microsatellites mined from globe artichoke EST database. BMC Genom 10:454

    Article  CAS  Google Scholar 

  • Scaglione D, Acquadro A, Portis E, Tirone M, Knapp SL, Lanteri S (2012) RAD tag sequencing as a source of SNP markers in Cynara cardunculus L. BMC Genom 13:3

    Article  CAS  Google Scholar 

  • Scaglione D, Reyes Chin Wo S, Acquadro A, Froenicke L, Portis E, Beitel C, Tirone M, Mauro R, Lo Monaco A, Mauromicale G, Faccioli P, Cattivelli L, Rieseberg L, Michelmore R, Lanteri S (2016) The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny. Sci Rep 6:19427

    Article  CAS  Google Scholar 

  • Sonnante G, Gatto A, Morgese A, Montemurro F, Sarli G, Blanco E, Pignone D (2011) Genetic map of artichoke × wild cardoon: toward a consensus map for Cynara cardunculus. Theor Appl Genet 123:1215–1229

    Article  Google Scholar 

  • Tanksley SD, McCouch SR (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277:1063–1066

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Sergio Lanteri .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this chapter

Check for updates. Verify currency and authenticity via CrossMark

Cite this chapter

Portis, E., Acquadro, A., Lanteri, S. (2019). Genetics and Breeding. In: Portis, E., Acquadro, A., Lanteri, S. (eds) The Globe Artichoke Genome. Compendium of Plant Genomes. Springer, Cham. https://doi.org/10.1007/978-3-030-20012-1_6

Download citation

Publish with us

Policies and ethics

Navigation