Isoprenylation of Monomeric GTPases in Human Trabecular Meshwork Cells

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Lipidomics

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2625))

Abstract

Small monomeric GTPases, including those belonging to the Rho family, regulate a diverse array of intracellular signaling pathways which affect vesicle transport/trafficking, endocytosis, cell cycle progression, cell contractility, and formation of stress fibers or focal adhesions. Functional activation of newly synthesized small monomeric GTPases is facilitated by a multi-step posttranslational process involving transferase-catalyzed addition of farnesyl or geranylgeranyl isoprenoids to conserved cysteine residues within a unique carboxy terminal -CaaX motif. Here, using well-established and widely available contemporary methodologies, detailed protocols by which to semi-quantitatively evaluate the functional consequence of posttranslational isoprenylation in human trabecular meshwork cells are described. We propose the novel concept that posttranslational isoprenylation itself is a key regulator of mammalian Rho GTPase protein expression and turnover.

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References

  1. Carruthers DN, Lee TS (2021) Diversifying isoprenoid platforms via atypical carbon substrates and non-model microorganisms. Front Microbiol 12:791089

    Article  Google Scholar 

  2. Kirby J, Keasling JD (2009) Biosynthesis of plant isoprenoids: perspectives for microbial engineering. Annu Rev Plant Biol 60:335–355

    Article  CAS  Google Scholar 

  3. Kuzuyama T, Seto H (2012) Two distinct pathways for essential metabolic precursors for isoprenoid biosynthesis. Proc Jpn Acad Ser B Phys Biol Sci 88(3):41–52

    Article  CAS  Google Scholar 

  4. Holstein SA, Hohl RJ (2004) Isoprenoids: remarkable diversity of form and function. Lipids 39(4):293–309

    Article  CAS  Google Scholar 

  5. Lynen F (1967) Biosynthetic pathways from acetate to natural products. Pure Appl Chem 14(1):137–167

    Article  CAS  Google Scholar 

  6. Zhang FL, Casey PJ (1996) Protein prenylation: molecular mechanisms and functional consequences. Annu Rev Biochem 65:241–269

    Article  CAS  Google Scholar 

  7. Gao J, Liao J, Yang GY (2009) CAAX-box protein, prenylation process and carcinogenesis. Am J Transl Res 1(3):312–325

    Google Scholar 

  8. Wright LP, Philips MR (2006) Thematic review series: lipid posttranslational modifications. CAAX modification and membrane targeting of Ras. J Lipid Res 47(5):883–891

    Article  CAS  Google Scholar 

  9. Jeong A et al (2018) Isoprenoids and protein prenylation: implications in the pathogenesis and therapeutic intervention of Alzheimer’s disease. Crit Rev Biochem Mol Biol 53(3):279–310

    Article  Google Scholar 

  10. Sever N et al (2003) Insig-dependent ubiquitination and degradation of mammalian 3-hydroxy-3-methylglutaryl-CoA reductase stimulated by sterols and geranylgeraniol. J Biol Chem 278(52):52479–52490

    Article  CAS  Google Scholar 

  11. Holstein SA, Wohlford-Lenane CL, Hohl RJ (2002) Isoprenoids influence expression of Ras and Ras-related proteins. Biochemistry 41(46):13698–13704

    Article  CAS  Google Scholar 

  12. Holstein SA, Wohlford-Lenane CL, Hohl RJ (2002) Consequences of mevalonate depletion. Differential transcriptional, translational, and post-translational up-regulation of Ras, Rap1a, RhoA, AND RhoB. J Biol Chem 277(12):10678–10682

    Article  CAS  Google Scholar 

  13. Stubbs EB Jr, Von Zee CL (2012) Prenylation of rho G-proteins: a novel mechanism regulating gene expression and protein stability in human trabecular meshwork cells. Mol Neurobiol 46(1):28–40

    Article  CAS  Google Scholar 

  14. Yue BY, Higginbotham EJ, Chang IL (1990) Ascorbic acid modulates the production of fibronectin and laminin by cells from an eye tissue-trabecular meshwork. Exp Cell Res 187(1):65–68

    Article  CAS  Google Scholar 

  15. Keller KE et al (2018) Consensus recommendations for trabecular meshwork cell isolation, characterization and culture. Exp Eye Res 171:164–173

    Article  CAS  Google Scholar 

  16. Pang IH et al (1994) Preliminary characterization of a transformed cell strain derived from human trabecular meshwork. Curr Eye Res 13(1):51–63

    Article  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported, in part, by grants from the Department of Veterans Affairs, National Institutes of Health, the Midwest Eye-Banks (Eversight), the Illinois Society for the Prevention of Blindness, and the Richard A. Perritt Charitable Foundation.

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Correspondence to Evan B. Stubbs Jr .

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Stubbs, E.B. (2023). Isoprenylation of Monomeric GTPases in Human Trabecular Meshwork Cells. In: Bhattacharya, S.K. (eds) Lipidomics. Methods in Molecular Biology, vol 2625. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-2966-6_19

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  • DOI: https://doi.org/10.1007/978-1-0716-2966-6_19

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-2965-9

  • Online ISBN: 978-1-0716-2966-6

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