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Current insights into palm fungi with emphasis on taxonomy and phylogeny

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Abstract

Palms (Arecaceae) are emblems of tropical forests and host a vast array of fungi. The fungi associated with palms have been studied for over two centuries. However, taxonomic identification of some taxa, especially of the prominent genera Anthostomella, Linocarpon and Oxydothis, when based solely on macro- and micro-morphological characteristics is confused and needs better taxonomic resolution. The present study contributes to palm fungal taxonomy by incorporating molecular approaches for fungal identification based on new collections from China and Thailand. In total, 538 samples with 248 successfully obtained fungal isolates were derived from about 23 palm genera. Preliminary analyses showed that these taxa could be recognized as 170 species belonging to 115 genera, 66 families, and three genera incertae sedis. The fungi were mainly distributed in Dothideomycetes (c. 57.6%) and Sordariomycetes (c. 40.6%), with a few Lecanoromycetes (0.6%), Leotiomycetes (0.6%), and Orbiliomycetes (0.6%). In the present study on palm hosts in different ecosystems, it becomes obvious that the biodiversity and specificity of palm fungi is a reflection of habitats more than the hosts or geographical distributions. Based on morpho-phylogenetic evidence, 109 interesting taxa have been illustrated and described, including one new family Pseudocapsulosporaceae, seven new genera and 48 new species. The new genera are Javarisimilis and Thecatisporium (Astrosphaeriellaceae), Neomorosphaeria (Morosphaeriaceae), Pseudocapsulospora (Pseudocapsulosporaceae), Pseudoeutypa (Diatrypaceae), Pseudothailandiomyces (Tirisporellaceae), and Subanthostomella (Xylariales incertae sedis). New species are Anthostomella arecacearum, A. foliatella, A. mangrovei, A. pseudobirima, Brunneiapiospora phoenicis, Diaporthe trachycarpi, Dictyosporium licualae, Ernakulamia palmae, Exosporium licualae, Fasciatispora asexualis, Javarisimilis palmarum, Koorchaloma arecae, Lophodermium nypae, Morenoina rattanica, Nemania palmarum, Neobambusicola palmae, Neodeightonia nypae, Neoeriomycopsis sabal, Neoleptosporella palmae, Neomassaria livistonae, N. palmae, Neomorosphaeria mangrovei, Neosetophoma trachycarpi, Niesslia trachycarpi, Orbilia licualae, Oxydothis caryotae, Ox. foliata, Ox. palmae, Ox. pyriforme, Ox. sinensis, Parateichospora palmarum, Periconia arecacearum, Phaeosphaeria palmae, Phyllosticta arecacearum, P. foliacea, Protocreopsis palmarum, Pseudocapsulospora phoenicis, Ps. rhapidis, Pseudomicrothyrium palmae, Pseudothailandiomyces nypae, Serenomyces phoeniceus, Stanjehughesia elaeidis, Subanthostomella palmae, Tetraploa palmae, T. phoenicis, Thecatisporium palmae, Virgaria palmae, and Yunnanomyces mangrovei. New combinations are proposed for four species. New sequences and a reference specimen are provided for Appendispora frondicola, the type species of Appendispora, which supports the replacement of this genus in Monoblastiaceae. Reference specimens are also provided for Anthostomella nypae, Arecophila nypae, Melanographium citri, M. palmicola, M. selenioides, and Trichobotrys effusus. The new hyphomycete species, Fasciatispora asexualis, is the first asexual report for the genus Fasciatispora. Sexual morphs of the genera Neoeriomycopsis and Yunnanomyces are reported for the first time. Furthermore, Hyde and co-workers specializing in palm fungi, have developed an online database of palm fungi, which will be updated with new and interesting palm fungi.

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Acknowledgements

This study was supported by the Joint Fund of the National Natural Science Foundation of China and the Karst Science Research Center of Guizhou province (Grant No. U1812401). We are grateful to a grant of the Thailand Research Fund for supporting collection and research facilities (Grant No. RSA5980068). Jian-Kui Liu thanks the National Natural Science Foundation of China (NSFC 31600032) and Science and Technology Foundation of Guizhou Province (LH [2015]7061). K.D. Hyde thanks the National Research Council of Thailand (NRCT) grant “Total fungal diversity in a given forest area with implications towards species numbers, chemical diversity and biotechnology” (Grant No. N42A650547). This work was also supported by the Chinese Research Fund (project no E1644111K1) entitled “Flexible introduction of high-level expert program, Kunming Institute of Botany, Chinese Academy of Sciences and Major science and technology projects and key R&D plans/programs, Yunnan Province (202202AE090001). E.B. Gareth Jones and K.D. Hyde are supported by the Distinguished Scientist Fellowship Program (DSFP), King Saud University, Saudi Arabia. The authors would like to thank the staff of Ngao Mangrove Forest Research Center for their assistance in sample collection. Yao Feng and Qiu-Ju Shang are acknowledged for kindly collecting samples, and sincere thanks are extended to Yuan S. Liu for his spiritual word and encouragement.

Funding

Funding was provided by Joint Fund of the National Natural Science Foundation of China and the Karst Science Research Center of Guizhou Province (Grant no. U1812401).

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Authors and Affiliations

  1. School of Life Science and Technology, Center for Informational Biology, University of Electronic Science and Technology of China, Chengdu, 611731, People’s Republic of China

    Sheng-Nan Zhang, **an-Dong Yu & Jian-Kui Liu

  2. Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200, Thailand

    Sheng-Nan Zhang, E. B. Gareth Jones & Ratchadawan Cheewangkoon

  3. Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand

    Sheng-Nan Zhang & Kevin D. Hyde

  4. Department of Botany and Microbiology, College of Science, King Saud University, P.O Box 2455, Riyadh, 11451, Kingdom of Saudi Arabia

    Kevin D. Hyde & E. B. Gareth Jones

  5. CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201, People’s Republic of China

    Kevin D. Hyde

  6. Innovative Institute for Plant Health/Key Laboratory of Green Prevention and Control on Fruits and Vegetables in South China, Ministry of Agriculture and Rural Affairs, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225, Guangdong, People’s Republic of China

    Kevin D. Hyde

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Zhang, SN., Hyde, K.D., Jones, E.B.G. et al. Current insights into palm fungi with emphasis on taxonomy and phylogeny. Fungal Diversity (2024). https://doi.org/10.1007/s13225-024-00536-9

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