Abstract
Nitrogen fixation is one of the most important sources of new nitrogen in the ocean and thus profoundly affects the nitrogen and carbon biogeochemical processes. The distribution, controlling factors, and flux of N2 fixation in the global ocean remain uncertain, partly because of the lack of methodological uniformity. The 15N2 tracer assay (the original bubble method → the 15N2-enriched seawater method → the modified bubble method) is the mainstream method for field measurements of N2 fixation rates (NFRs), among which the original bubble method is the most frequently used. However, accumulating evidence has suggested an underestimation of NFRs when using this method. To improve the availability of previous data, we compared NFRs measured by three 15N2 tracer assays in the South China Sea. Our results indicate that the relationship between NFRs measured by the original bubble method and the 15N2-enriched seawater method varies obviously with area and season, which may be influenced by incubation time, diazotrophic composition, and environmental factors. In comparison, the relationship between NFRs measured by the original bubble method and the modified bubble method is more stable, indicating that the N2 fixation rates based on the original bubble methods may be underestimated by approximately 50%. Based on this result, we revised the flux of N2 fixation in the South China Sea to 40 mmol/(m2·a). Our results improve the availability and comparability of literature NFR data in the South China Sea. The comparison of the 15N2 tracer assay for NFRs measurements on a larger scale is urgently necessary over the global ocean for a more robust understanding of the role of N2 fixation in the marine nitrogen cycle.
References
Bombar D, Dippner J W, Doan H N, et al. 2010. Sources of new nitrogen in the Vietnamese upwelling region of the South China Sea. Journal of Geophysical Research: Oceans, 115(C6): C06018
Bombar D, Paerl R W, Anderson R, et al. 2018. Filtration via conventional glass fiber filters in 15N2 tracer assays fails to capture all nitrogen-fixing prokaryotes. Frontiers in Marine Science, 5: 6, doi: https://doi.org/10.3389/fmars.2018.00006
Böttjer D, Dore J E, Karl D M, et al. 2017. Temporal variability of nitrogen fixation and particulate nitrogen export at Station ALOHA. Limnology and Oceanography, 62(1): 200–216, doi: https://doi.org/10.1002/lno.10386
Casciotti K L. 2016. Nitrogen and oxygen isotopic studies of the marine nitrogen cycle. Annual Review of Marine Science, 8: 379–407, doi: https://doi.org/10.1146/annurev-marine-010213-135052
Chang B X, Jayakumar A, Widner B, et al. 2019. Low rates of dinitrogen fixation in the eastern tropical South Pacific. Limnology and Oceanography, 64(5): 1913–1923, doi: https://doi.org/10.1002/lno.11159
Chen Yuh-Ling Lee, Chen Houng-Yung, Lin Yen-Huei, et al. 2014. The relative contributions of unicellular and filamentous diazotrophs to N2 fixation in the South China Sea and the upstream Kuroshio. Deep-Sea Research Part I: Oceanographic Research Papers, 85: 56–71, doi: https://doi.org/10.1016/j.dsr.2013.11.006
Chen Yuh-Ling Lee, Chen Houng-Yung, Tuo Sing-How, et al. 2008. Seasonal dynamics of new production from Trichodesmium N2 fixation and nitrate uptake in the upstream Kuroshio and South China Sea Basin. Limnology and Oceanography, 53(5): 1705–1721, doi: https://doi.org/10.4319/lo.2008.53.5.1705
Chen Shengbao, Zhang Run, Chen Nengwang, et al. 2018. On the introduction of 15N2 tracer in marine N2 fixation rate assay. Haiyang Xuebao (in Chinese), 40(10): 42–50
Codispoti L A. 2007. An oceanic fixed nitrogen sink exceeding 400 Tg N a−1 vs the concept of homeostasis in the fixed-nitrogen inventory. Biogeosciences, 4(2): 233–253, doi: https://doi.org/10.5194/bg-4-233-2007
Dabundo R, Lehmann M F, Treibergs L, et al. 2014. The contamination of commercial 15N2 gas stocks with 15N-labeled nitrate and ammonium and consequences for nitrogen fixation measurements. PLoS ONE, 9(10): e110335, doi: https://doi.org/10.1371/journal.pone.0110335
Ding Changling, Sun Jun, Xue Bing. 2016. Winter and summer diazo-trophic cyanobacteria in the western South China Sea. Haiyang Xuebao (in Chinese), 38(4): 84–94
Dugdale R C, Menzel D W, Ryther J H. 1961. Nitrogen fixation in the Sargasso Sea. Deep-Sea Research, 7(4): 297–300, doi: https://doi.org/10.1016/0146-6313(61)90051-X
Gradoville M R, Bombar D, Crump B C, et al. 2017. Diversity and activity of nitrogen-fixing communities across ocean basins. Limnology and Oceanography, 62(5): 1895–1909, doi: https://doi.org/10.1002/lno.10542
Grosse J, Bombar D, Doan H N, et al. 2010. The Mekong River plume fuels nitrogen fixation and determines phytoplankton species distribution in the South China Sea during low and high discharge season. Limnology and Oceanography, 55(4): 1668–1680, doi: https://doi.org/10.4319/lo.2010.55.4.1668
Großkopf T, Mohr W, Baustian T, et al. 2012. Doubling of marine dinitrogen-fixation rates based on direct measurements. Nature, 488(7411): 361–364, doi: https://doi.org/10.1038/nature11338
Gruber N, Sarmiento J L. 1997. Global patterns of marine nitrogen fixation and denitrification. Global Biogeochemical Cycles, 11(2): 235–266, doi: https://doi.org/10.1029/97GB00077
Kim T W, Lee K, Duce R, et al. 2014. Impact of atmospheric nitrogen deposition on phytoplankton productivity in the South China Sea. Geophysical Research Letters, 41(9): 3156–3162, doi: https://doi.org/10.1002/2014GL059665
Klawonn I, Lavik G, Böning P, et al. 2015. Simple approach for the preparation of 15–15N2-enriched water for nitrogen fixation assessments: evaluation, application and recommendations. Frontiers in Microbiology, 6: 769
Kong Liangliang, **g Hongmei, Kataoka T, et al. 2011. Phylogenetic diversity and spatio-temporal distribution of nitrogenase genes (nifH) in the northern South China Sea. Aquatic Microbial Ecology, 65(1): 15–27, doi: https://doi.org/10.3354/ame01531
Li Danyang, Liu Jiaxing, Zhang Run, et al. 2019. N2 fixation impacted by carbon fixation via dissolved organic carbon in the changing Daya Bay, South China Sea. Science of the Total Environment, 674: 592–602, doi: https://doi.org/10.1016/j.scitotenv.2019.04.176
Li Danyang, Zhang Run. 2018. Research progresses in biological nitrogen fixation in the South China Sea. Journal of **amen University: Natural Science (in Chinese), 57(6): 760–767
Lin Feng. 2013. Spatial and temporal variations of biological N2 fixation rate and its controlling factors in the China marginal seas (in Chinese) [dissertation]. **amen: **amen University
Liu Jiaxing, Zhou Linbin, Li Gang, et al. 2016. Nitrogen fixation and its contribution of nitrogen to primary production in the surface waters of the northeastern South China Sea during October 2014. Journal of Tropical Oceanography (in Chinese), 35(5): 38–47
Liu Jiaxing, Zhou Linbin, Li Jiajun, et al. 2020. Effect of mesoscale eddies on diazotroph community structure and nitrogen fixation rates in the South China Sea. Regional Studies in Marine Science, 35: 101106, doi: https://doi.org/10.1016/j.rsma.2020.101106
Mohr W, Großkopf T, Wallace D W R, et al. 2010. Methodological underestimation of oceanic nitrogen fixation Rates. PLoS ONE, 5(9): e12583, doi: https://doi.org/10.1371/journal.pone.0012583
Montoya J P, Voss M, Kahler P, et al. 1996. A simple, high-precision, high-sensitivity tracer assay for N2 fixation. Applied and Environmental Microbiology, 62(3): 986–993, doi: https://doi.org/10.1128/aem.62.3.986-993.1996
Osorio-Santos K, Pietrasiak N, Bohunická M, et al. 2014. Seven new species of Oculatella (Pseudanabaenales, Cyanobacteria): taxonomically recognizing cryptic diversification. European Journal of Phycology, 49(4): 450–470, doi: https://doi.org/10.1080/09670262.2014.976843
Ren Haojia, Chen Yi-Chi, Wang **ngchen T, et al. 2017. 21st-century rise in anthropogenic nitrogen deposition on a remote coral reef. Science, 356(6339): 749–752, doi: https://doi.org/10.1126/science.aal3869
Schloss P D. 2009. A high-throughput DNA sequence aligner for microbial ecology studies. PLoS ONE, 4(12): e8230, doi: https://doi.org/10.1371/journal.pone.0008230
Shiozaki T, Chen Yuh-Ling Lee, Lin Yen-Huei, et al. 2014. Seasonal variations of unicellular diazotroph groups A and B, and Trichodesmium in the northern South China Sea and neighboring upstream Kuroshio Current. Continental Shelf Research, 80: 20–31, doi: https://doi.org/10.1016/j.csr.2014.02.015
Van Wambeke F, Gimenez A, Duhamel S, et al. 2018. Dynamics and controls of heterotrophic prokaryotic production in the western tropical South Pacific Ocean: links with diazotrophic and photosynthetic activity. Biogeosciences, 15(9): 2669–2689, doi: https://doi.org/10.5194/bg-15-2669-2018
Voss M, Bombar D, Loick N, et al. 2006. Riverine influence on nitrogen fixation in the upwelling region off Vietnam, South China Sea. Geophysical Research Letters, 33(7): L07604
Wannicke N, Benavides M, Dalsgaard T, et al. 2018. New perspectives on nitrogen fixation measurements using 15N2 gas. Frontiers in Marine Science, 5: 120, doi: https://doi.org/10.3389/fmars.2018.00120
Wen Zuozhu, Lin Wenfang, Shen Rong, et al. 2017. Nitrogen fixation in two coastal upwelling regions of the Taiwan Strait. Scientific Reports, 7(1): 17601, doi: https://doi.org/10.1038/s41598-017-18006-5
White A E, Granger J, Selden C, et al. 2020. A critical review of the 15N2 tracer method to measure diazotrophic production in pelagic ecosystems. Limnology and Oceanography: Methods, 18(4): 129–147, doi: https://doi.org/10.1002/lom3.10353
Wilson S T, Böttjer D, Church M J, et al. 2012. Comparative assessment of nitrogen fixation methodologies, conducted in the oligotrophic North Pacific Ocean. Applied and Environmental Microbiology, 78(18): 6516–6523, doi: https://doi.org/10.1128/AEM.01146-12
Wong George T F, Tseng Chun-Mao, Wen Liang-Saw, et al. 2007. Nutrient dynamics and N-anomaly at the SEATS station. Deep-Sea Research Part II: Topical Studies in Oceanography, 54(14–15): 1528–1545
Yang **-Yu Terence, Kao Shui-Ji, Dai Minhan, et al. 2017. Examining N cycling in the northern South China Sea from N isotopic signals in nitrate and particulate phases. Journal of Geophysical Research: Biogeosciences, 122(8): 2188–2136
Zehr J P, Capone D G. 2020. Changing perspectives in marine nitrogen fixation. Science, 368(6492): eaay9514, doi: https://doi.org/10.1126/science.aay9514
Zehr J P, Montoya J P, Jenkins B D, et al. 2007. Experiments linking nitrogenase gene expression to nitrogen fixation in the North Pacific subtropical gyre. Limnology and Oceanography, 52(1): 169–183, doi: https://doi.org/10.4319/lo.2007.52.1.0169
Zehr J P, Turner P J. 2001. Nitrogen fixation: Nitrogenase genes and gene expression. Methods in Microbiology, 30: 271–286
Zhang Run, Chen Min, Yang Qing, et al. 2015. Physical-biological coupling of N2 fixation in the northwestern South China Sea coastal upwelling during summer. Limnology and Oceanography, 60(4): 1411–1425, doi: https://doi.org/10.1002/lno.10111
Zhang Run, Wang **ngchen T, Ren Haojia, et al. 2020. Dissolved organic nitrogen cycling in the South China Sea from an isotopic perspective. Global Biogeochemical Cycles, 34(12): e2020GB 006551
Zhang Run, Zhang Dongsheng, Chen Min, et al. 2019. N2 fixation rate and diazotroph community structure in the western tropical North Pacific Ocean. Acta Oceanologica Sinica, 38(12): 26–34, doi: https://doi.org/10.1007/s13131-019-1513-4
Acknowledgements
We are grateful to the project team members for sam** assistance. Thanks are also due to scientists who kindly shared physical, chemical and biological data. Samples were collected during the open research cruises NORC2013-07, NORC2014-07, NORC2017-05, NORC2017-06 and NORC2018-05, supported by Natural Science Foundation of China Shiptime Sharing Project.
Author information
Authors and Affiliations
Corresponding author
Additional information
Foundation item
The National Natural Science Foundation of China under contract Nos 42076042 and 41721005; the Fund of Ministry of Science and Technology of China under contract No. 2017FY201403; the Fund of China Ocean Mineral Resources R&D Association under contract No. DY135-13-E2-03.
Electronic Supplementary Material
Rights and permissions
About this article
Cite this article
Li, D., Zheng, M., Qiu, Y. et al. Comparative assessment of nitrogen fixation rate by 15N2 tracer assays in the South China Sea. Acta Oceanol. Sin. 42, 75–82 (2023). https://doi.org/10.1007/s13131-022-2092-3
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s13131-022-2092-3