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Two distinct structures of the sandwich complex of scytonemin with iron and their relevance to astrobiology

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Abstract

Scytonemin is a pigment synthesized by cyanobacteria and found in their sheath. The importance of this biomolecule is its photoprotective function, which is one of the major survival strategies adopted by extremophiles under stressed conditions. Scytonemin has been identified as a prime biomarker in the search for past or present life on planetary surfaces and subsurfaces. This work proposes two new structures, each consisting of two scytonemin molecules forming a sandwich complex with iron III. The Raman wave numbers for the proposed structures are predicted computationally using DFT calculations. The predicted bands are reported in relation to structural changes that take place upon complex formation. The complexes may be identified by comparing their Raman spectra to that of the parent scytonemin. This information is intended to widen the search for experimental evidence for scytonemin molecules forming iron complexes, novel biosignatures for the extremophilic colonization of terrestrial iron-rich terrains with potential analogues for robotic exploration of Mars.

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References

  1. Proteau PJ, Gerwick WH, Garcia-Pichel F, Castenholz R (1993). Experientia 49:825–829

    Article  CAS  PubMed  Google Scholar 

  2. Vincent WF, Castenholz RW, Dournes MT, Howard-Williams C (1993). J Phycol 29:745–755

    Article  Google Scholar 

  3. Edwards HGM, Garcia-Pichel F, Newton EM, Wynn-Williams DD (1999). Spectrochim Acta A 56:193–200

    Article  Google Scholar 

  4. Varnali T, Edwards HGM, Hargreaves MD (2009). Int J Astrobiol 8:133–140

    Article  CAS  Google Scholar 

  5. Bultel-Ponce V, Felix-Theodose F, Sarlhou C, Ponge JF, Bodo B (2004). J Nat Prod 67:678–681

    Article  CAS  PubMed  Google Scholar 

  6. Grant CS, Louda JW (2013). Org Geochem 65:29–36

    Article  CAS  Google Scholar 

  7. Garcia-Pichel F, Castenholz RW (1991). J Phycol 27:395–409

    Article  CAS  Google Scholar 

  8. Garcia-Pichel F, Sherry ND, Castenholz RW (1992). Photochem Photobiol 56:17–23

    Article  CAS  PubMed  Google Scholar 

  9. Cockell CS, CS KJ (1999). Biol Rev Camb Philos Soc 74:311–345

    Article  CAS  PubMed  Google Scholar 

  10. Wynn-Williams DD, Edwards HGM, Garcia-Pichel F (1999). Eur J Phycol 34:381–391

    Article  Google Scholar 

  11. Edwards HGM, Villar SEJ, Parnell J, Cockell CS, Lee P (2005). Analyst 130:917–923

    Article  CAS  PubMed  Google Scholar 

  12. Edwards HGM, Mohsin MA, Sadooni FN, Hassan NFN, Munshi T (2006). Anal Bioanal Chem 385:46–56

    Article  CAS  PubMed  Google Scholar 

  13. Edwards HGM, Jorge Villar SE, Pullan D, Hofmann BA, Hargreaves MD, Westall F (2007). J Raman Spectrosc 38:1352–1361

    Article  CAS  Google Scholar 

  14. Edwards HGM, Hargreaves MD (2008) In: Costas F (ed) Planet Mars research focus. Nova Publishers, New York, pp 117–164

    Google Scholar 

  15. Pullan D, Westall F, Hofmann BA, Parnell J, Cockell CS, Edwards HGM, Jorge Villar SE, Schröder C, Cressey G, Marinangeli L, Richter L, Klingelhöfer G (2008). Astrobiology 8:119–156

    Article  CAS  PubMed  Google Scholar 

  16. Edwards HGM, Hutchinson IB, Ingley R (2012). Anal Bioanal Chem 404:1723–1731

    Article  CAS  PubMed  Google Scholar 

  17. Edwards HGM (2010) In: Basiuk VA (ed) Astrobiology: emergence, search and detection of life. American Scientific Pblishers, Stevenson Ranch, pp 361–375

    Google Scholar 

  18. Kolo K, Konhauser K, Krumbein WE, van Ingelgem Y, Hubin A, Claeys P (2009). Astrobiology 9:777–796

    Article  CAS  PubMed  Google Scholar 

  19. Varnali T, Edwards HGM (2010). Astrobiology 10:711–716

    Article  CAS  PubMed  Google Scholar 

  20. Varnali T, Edwards HGM (2013) J Raman Spectrosc 82–83:128–133

    Google Scholar 

  21. Varnali T, Edwards HGM (2013). Astrobiology 13:861–869

    Article  CAS  PubMed  Google Scholar 

  22. Varnali T, Edwards HGM (2014). Spectrochim Acta A 117:72–77

    Article  CAS  Google Scholar 

  23. Spartan’10 Wavefunction, Inc. Irvine, CA

  24. Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Scalmani G, Barone V, Mennucci B, Petersson GA, Nakatsuji H, Caricato M, Li X, Hratchian HP, Izmaylov AF, Bloino J, Zheng G, Sonnenberg JL, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Vreven T, Montgomery JA, Peralta JE, Ogliaro F, Bearpark M, Heyd JJ, Brothers E, Kudin KN, Staroverov VN, Kobayashi R, Normand J, Raghavachari K, Rendell A, Burant JC, Iyengar SS, Tomasi J, Cossi M, Rega N, Millam NJ, Klene M, Knox JE, Cross JB, Bakken V, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Martin RL, Morokuma K, Zakrzewski VG, Voth GA, Salvador P, Dannenberg JJ, Dapprich S, Daniels AD, Farkas Ö, Foresman JB, Ortiz JV, Cioslowski J, Fox DJ (2009) Gaussian 09, Revision B01. Gaussian, Inc., Wallingford

    Google Scholar 

  25. Varnali T, Edwards HGM (2014). Phil Trans R Soc A 372:20140197

    Article  CAS  PubMed  Google Scholar 

  26. Foresman JB, Frisch A (1996) Exploring chemistry with electronic structure methods. Gaussian, Inc., Pittsburgh, pp 63–64

    Google Scholar 

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Acknowledgments

We thank Volkan Fındık for running the frequency calculations and Hilay Dust for preparing the spectrum figures.

Funding

This work has been funded by Bogazici University Research Funds, Project No. 15B05P4.

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Correspondence to Tereza Varnali.

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The authors declare that they have no conflict of interest.

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Varnali, T., Gören, B. Two distinct structures of the sandwich complex of scytonemin with iron and their relevance to astrobiology. Struct Chem 29, 1565–1572 (2018). https://doi.org/10.1007/s11224-018-1159-4

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