Log in

Diversity, diversification and distribution of Iranian vertebrates: the legacy of mountains uplifting, past climatic oscillations, sea level fluctuations and geographical barriers

  • Review Paper
  • Published:
Biodiversity and Conservation Aims and scope Submit manuscript

Abstract

Identifying historical drivers of biodiversity distribution patterns is a central issue in ecology and biogeography. Iran is a biodiversity-rich country in southwestern Asia. It is known that past events like climatic oscillations and mountains uplifting have had an outstanding impact on evolution, speciation, and diversification of biodiversity in the country. However, evidence of the impacts of past events on species distribution and genetic structure is sparse. Thus, in this paper, we have assembled the first review, combining results of different studies on different taxonomic groups (mammals, birds, reptiles, amphibians, and freshwater fishes) to identify the most important past events and geographical barriers that have shaped the current distribution patterns of vertebrate species and their genetic structure in Iran. We also presented the most comprehensive and updated checklist of vertebrate species of Iran. The vertebrates of Iran comprise 1317 species in 516 genera, 167 families, and 53 orders, of which 180 species (13.67% of total fauna) considered as endemic. By assessing 85 published papers we identified three major past events in Iran which are responsible for the current distribution patterns of vertebrate species and their genetic structure. These include mountain uplifting, past climatic oscillations, and sea level change. We also identified several geographical barriers which played a very critical role in sha** vertebrate species distribution patterns in Iran. The uplifting of the Zagros Mountains was the most important event that played a critical role in sha** the distribution and genetic structure of all vertebrate groups in Iran. Past climate change was found to be very influential in sha** species richness patterns, particularly reptile richness and genetic divergence patterns (Persian abstract presented in Online Resource 1).

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
EUR 32.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or Ebook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

Data availability

All data generated or analysed during this study are included in this published article.

References

  • Abdrakhmatove K, Aldazhanove Y, Hager SA, Hamburger BH, Herring MW, Kalabaev TA et al (1996) Relatively recent construction of the Tien Shan inferred from GPS measurements of present day crustal deformation rates. Nature 384:450–453

    Article  Google Scholar 

  • Afroosheh M, Rodder D, Mikulicek P, Akmali V, Vaissi S, Fleck J et al (2019) Mitochondrial DNA variation and Quaternary range dynamics in the endangered yellow spotted mountain newt, Neurergus derjugini (Caudata, Salamandridae). J Zool Syst Evol 57:580–590

    Article  Google Scholar 

  • Ahmadi H, Feiznia S (2006) Quaternary formations (Aeoretical and applied principles in natural resources). University of Tehran Press, Tehran

    Google Scholar 

  • Ahmadi M, Naderi M, Kaboli M, Nazarizadeh M, Karami M, Beitollahi SM (2018) Evolutionary applications of phylogenetically-informed ecological niche modelling (ENM) to explore cryptic diversification over cryptic refugia. Mol Phylogenet Evol 127:712–722

    Article  Google Scholar 

  • Ahmadzadeh F, Carretero MA, Harris DJ, Perera A, Böhme W (2012) A molecular phylogeny of the eastern group of ocellated lizard genus Timon (Sauria: Lacertidae) based on mitochondrial and nuclear DNA sequences. Amph-Rept 33:1–10

    Article  Google Scholar 

  • Ahmadzadeh F, Carretero MA, Rodder D, Harris DJ, Freitas SN, Perera A et al (2013a) Inferring the effects of past climate fluctuations on the distribution pattern of Iranolacerta (Reptilia, Lacertidae): evidence from mitochondrial DNA and species distribution models. Zool Anz 252:141–148

    Article  Google Scholar 

  • Ahmadzadeh F, Flecks M, Carretero MA, Mozaffari O, Böhme W, Harris DJ et al (2013b) Cryptic speciation patterns in Iranian rock lizards uncovered by integrative taxonomy. PLoS ONE 8:e80563

    Article  Google Scholar 

  • Ahmadzadeh F, Lymberakis P, Pirouz RS, Kapli P (2017) The evolutionary history of two lizards (Squamata: Lacertidae) is linked to the geological development of Iran. Zool Anz 270:49–56

    Article  Google Scholar 

  • Ahmadzadeh F, Shahrokhi G, Saberi-Pirooz R, Oladi M, Taati M, Poyarkov NA et al (2020) Alborz Heritage: geographic distribution and genetic differentiation of the Iranian Paradactylodon (Amphibia: Hynobiidae). Amphib-Reptil 41:519–534

    Article  Google Scholar 

  • Akbarirad S, Darvish J, Aliabadian M (2016) Increased species diversity of brush-tailed mice, genus Calomyscus (Calomyscidae, Rodentia), in the Zagros Mountains, western Iran. Mammalia 80:549–562

    Article  Google Scholar 

  • Akbarpour M, Rastegar-Pouyani N, Fathinia B, Rastegar-Pouyani E (2020) A new species of the genus Eirenis Jan, 1863 (Squamata: Colubridae) from Kerman Province in South-central Iran. Zootaxa 4868:117–128

    Article  Google Scholar 

  • Allen KE, Greenbaum E, Hime PM, Tapondjou NWP, Sterkhova VV, Kusamba C et al (2021) Rivers, not refugia, drove diversification in arboreal, sub-Saharan African snakes. Ecol Evol 11:6133–6152

    Article  Google Scholar 

  • Alwan N, Esmaeili H-R, Krupp F (2016) Molecular phylogeny and zoogeography of the Capoeta damascina species complex (Pisces: Teleostei: Cyprinidae). PLoS ONE 11:e0156434

    Article  Google Scholar 

  • Amiri N, Vaissi S, Aghamir F, Saberi-Pirooz R, Rödder D, Ebrahimi E et al (2021) Tracking climate change (past-recent-future) in the spatial distribution pattern and the phylogeographic structure of Hyrcanian wood frog, Rana pseudodalmatina (Anura: Ranidae). J Zool Syst Evol 00:1–16

    Google Scholar 

  • Anderson SC (1999) The lizards of Iran. Society for the Study of Amphibians and Reptiles, Oxford

    Google Scholar 

  • Antonelli A, Nylander JAA, Persson C, Sanmartı I (2009) Tracing the impact of the Andean uplift on Neotropical plant evolution. PNAS 106:9749–9754

    Article  CAS  Google Scholar 

  • Araújo MB, Nogues-Bravo D, Diniz-Filho JAF, Haywood AM, Valdes PJ, Rahbek C (2007) Quaternary climate changes explain diversity among reptiles and amphibians. Ecography 31:8–15

    Article  Google Scholar 

  • Arbeláez-Cortés E, Trujillo-Arias N (2021) Role of the Chicamocha River Canyon on the phylogeography of humid montane forest birds in Colombia. J Avian Biol. https://doi.org/10.1111/jav.02833

    Article  Google Scholar 

  • Asadi A, Montgelard C, Nazarizadeh M, Moghaddasi A, Fatemizadeh F, Simonov E et al (2019) Evolutionary history and postglacial colonization of an Asian pit viper (Gloydius halys caucasicus) into Transcaucasia revealed by phylogenetic and phylogeographic analyses. Sci Rep 9:1224

    Article  Google Scholar 

  • Asadi Aghbolaghi M, Ahmadzadeh F, Kiabi B, Keyghobadi N (2019) The permanent inhabitant of the oak trees: phylogeography and genetic structure of the Persian squirrel (Sciurus anomalus). Biol J Linn Soc 127:197–212

    Article  Google Scholar 

  • Asgharzadeh A, Kaboli M, Rajabi-Maham H, Naderi M (2019) Phylogeny and genetic structure of the Yellow ground squirrel, Spermophilus fulvus (Lichtenstein, 1823), in Iran. Mamm Biol 98:137–145

    Article  Google Scholar 

  • Ashrafzadeh MR, Kaboli M, Naghavi MR (2016) Mitochondrial DNA analysis of Iranian brown bears (Ursus arctos) reveals new phylogeographic lineage. Mamm Biol 81:1–9

    Article  Google Scholar 

  • Ashrafzadeh MR, Khosravi R, Mohammadi A, Naghipour AA, Khoshnamvand H, Haidarian M, Penteriani V (2022) Modeling climate change impacts on the distribution of an endangered brown bear population in its critical habitat in Iran. Sci Total Environ 837:155753

    Article  CAS  Google Scholar 

  • Axen GJ, Lam PS, Grove M, Stockli DF, Hassanzadeh J (2001) Exhumation of the west-central Alborz Mountains, Iran, Caspian subsidence, and collision-related tectonics. Geology 29:559–562

    Article  CAS  Google Scholar 

  • Bagherfard S, Najafi N, Gharzi A, Akmali V (2021) Lack of intraspecific variations of the mitochondrial cytochrome b gene in the greater mouse-tailed bat Rhinopoma microphyllum (Chiroptera: Rhinopomatidae) in Iran. Genetica 149:37–45

    Article  CAS  Google Scholar 

  • Bahmani Z, Rastegar-Pouyani E, Rastegar-Pouyani N (2018) The phylogenetic relationships and molecular systematics of scincid lizards of the genus Heremites (Sauria, Scincidae) in the Middle East based on mtDNA sequences. Mitochondrial DNA Part A 29:846–855

    Article  CAS  Google Scholar 

  • Ballato P, Mulch A, Landgraf A, Strecker MR, Dalconi MC, Friedrich A (2010) Middle to late Miocene Middle Eastern climate fromstable oxygen and carbon isotope data, southern Alborz mountains, N Iran. EPSL 300:125–138

    Article  CAS  Google Scholar 

  • Bannikova A, Zemlemerova A, Colangelo ED, Sözen P, Sevindik M, Kidov M et al (2015) An underground burst of diversity–a new look at the phylogeny and taxonomy of the genus Talpa Linnaeus, 1758 (Mammalia: Talpidae) as revealed by nuclear and mitochondrial genes. Zool J Linn Soc 175:930–948

    Article  Google Scholar 

  • Bobek H (2002) Die Rolle der Eiszeit in Nordwestiran. Z Gletscherk 1937 25:130–183

    Google Scholar 

  • Boschman LM, Condamine FL (2022) Mountain radiations are not only rapid and recent: ancient diversification of South American frog and lizard families related to Paleogene Andean orogeny and Cenozoic climate variations. Glob Planet Change 208:103704

    Article  Google Scholar 

  • Brown SC, Wigley TML, Otto-Bliesner BL, Rahbek C, Fordham DA (2020) Persistent quaternary climate refugia are hospices for biodiversity in the Anthropocene. Nat Clim Change 10:244–248

    Article  Google Scholar 

  • Busche D, Sarvati R, Siefker UKN (2002) Reliefgeschichte eines Salzdoms im abflusslosen zentraliranischen Hochland. Petermanns Geogr Mitt 146:68–77

    Google Scholar 

  • Carneiro de Melo Moura C, Bastian HV, Bastian A, Wang E, Wang X, Wink M (2019) Pliocene origin, Ice Ages and Postglacial population expansion have influenced a panmictic phylogeography of the European Bee-Eater Merops apiaster. Diversity 11(1):12

    Article  Google Scholar 

  • Cheddadi R, de Beaulieu JL, Jouzel J, Andrieu-Ponel V, Laurent JM, Reille M, Raynaud D, Bar-Hen A (2005) Similarity of vegetation dynamics during interglacial periods. PNAS 102:13939–13943

    Article  CAS  Google Scholar 

  • Couvreur TL, Dauby G, Blach-Overgaard A, Deblauwe V, Dessein S, Droissart V, Hardy OJ, Harris DJ, Janssens SB, Ley AC, Mackinder BA, Sonké B, Sosef MS, Stévart T, Svenning JC, Wieringa JJ, Faye A, Missoup AD, Tolley KA, Nicolas V, Ntie S, Fluteau F, Robin C, Guillocheau F, Barboni D, Sepulchre P (2021) Tectonics, climate and the diversification of the tropical African terrestrial flora and fauna. Biol Rev 96:16–51

    Article  Google Scholar 

  • Darvish J, Mohammadi Z, Ghorbani F, Mahmoudi A, Dubey S (2015) hylogenetic relationships of Apodemus Kaup, 1829 (Rodentia: Muridae) species in the Eastern Mediterranean inferred from mitochondrial DNA, with emphasis on Iranian species. J Mamm Evol 22:583–595

    Article  Google Scholar 

  • Darvishsefat A (2008) Atlas of protected areas of Iran. Department of Environment, Tehran

    Google Scholar 

  • Darvishzadeh A (2003) Geology of Iran. Amirkabir Publishing, Tehran

    Google Scholar 

  • de Pous P, Simó-Riudalbas M, Els J, Jayasinghe S, Amat F, Carranza S (2016) Phylogeny and biogeography of Arabian populations of the Persian Horned Viper Pseudocerastes persicus (Duméril, Bibron & Duméril, 1854). Zool Middle East 62:231–238

    Article  Google Scholar 

  • Denton GH, Anderson RF, Toggweiler JR, Edwards RL, Schaefer JM, Putnam AE (2010) The last glacial termination. Science 328:1652–1656

    Article  CAS  Google Scholar 

  • Descombes P, Gaboriau T, Albouy C, Heine C, Leprieur F, Pellissier L (2018) Linking species diversification to palaeo-environmental changes: a process-based modelling approach. Glob Ecol Biogeogr 27:233–244

    Article  Google Scholar 

  • Dianat M, Darvish J, Cornette R, Aliabadian M, Nicolas V (2017) Evolutionary history of the persian jird, Meriones persicus, based on genetics, species distribution modelling and morphometric data. J Zoolog Syst Evol 55:29–45

    Article  Google Scholar 

  • Dianat M, Darvish J, Aliabadian M, Siahsarvie R, Krystufek B, Nicolas V (2020) Systematics and evolution of the libyan jird based on molecular and morphometric data. J Zool Syst Evol Res 58:439–458

    Article  Google Scholar 

  • Dubey S, Antonin, M, Denys D, Vogel P (2007) Use of phylogeny to resolve the taxonomy of the widespread and highly polymorphic African giant shrews (Crocidura olivieri group, Crocidurinae, Mammalia). Zoology 110: 48–57

  • Ebrahimipour F, Rastegar Pouyani N, Rastegar Pouyani E, Hosseinian Yousefkhani SS, Kamali K (2021) Molecular phylogenetic relationships within the Phrynocephalus maculatus-arabicus species complex (Sauria: Agamidae) in Iran. J Zool Syst Evol Res 59:1583–1588

    Article  Google Scholar 

  • Ehlers J, Gibbard PL (2004) Quaternary glaciations extent and chronology: part I: Europe. Elsevier, Amsterdam

    Google Scholar 

  • Eskandarzadeh N, Rastegar-Pouyani N, Rastegar-Pouyani E, Fathinia B, Bahmani Z, Hamidi K et al (2018) Annotated checklist of the endemic Tetrapoda species of Iran. Zoosystema 40:507–537

    Article  Google Scholar 

  • Esmaeili HR, Teimori A, Sayyadzadeh G, Masoudi M, Reichenbacher B (2014a) Phylogenetic relationships of the tooth-carp Aphanius (Teleostei: Cyprinodontidae) in the river systems of southern and south-western Iran based on mtDNA sequences. Zool Middle East 60:29–38

    Article  Google Scholar 

  • Esmaeili HR, Teimori A, Gholami Z, Reichenbacher B (2014b) Two new speciesof the tooth-carps Aphanius (Teleostei: Cyprinodontidae) and the evolutionaryhistory of the Iranian inland and inland-related Aphanius species. Zootaxa 3786:246–268

    Article  Google Scholar 

  • Esmaeili HR, Sayyadzadeh G, Japoshvili B, Eagderi S, Abbasi K, Mousavi-Sabet H (2020) Rhodeus caspius, a new bitterling from Iran (Teleostei: Cypriniformes: Acheilognathidae). Zootaxa 4851:319–337

    Article  Google Scholar 

  • Esmaeili HR, Sayyadzadeh G, Zarei F, Eagderi S, Mousavi-Sabet H (2022) Mystus cyrusi, a new species of bagrid catfish (Teleostei: Bagridae) from Middle East. Zootaxa 5099:325–343

    Article  Google Scholar 

  • Esquerré D, Brennan IG, Catullo RA, Torres-Pérez F, Keogh JS (2019) How mountains shape biodiversity: the role of the Andes in biogeography, diversification, and reproductive biology in South America’s most species-rich lizard radiation (Squamata: Liolaemidae). Evolution 73:214–230

    Article  Google Scholar 

  • Faizi H, Heidari N, Rastegar-Pouyani N, Rastegar-Pouyani E (2016) Molecular phylogeny of the genus Eumeces Wiegmann, 1834 (Reptilia: Scincidae) in Iran, inferred from 16s mitochondrial DNA. Nova Biol Rep 3:123–130

    Google Scholar 

  • Faizi H, Rastegar-Pouyani N, Rastegar-Pouyani E, Rajabizadeh M, Ilgaz Ç, Candan K, Kumlutaş Y (2021) Molecular phylogeny and systematic of the Schneider’s skink Eumeces schneiderii (Daudin, 1802) (Squamata: Scincidae). J Zool Syst Evol Res 59:1589–1603

    Article  Google Scholar 

  • Farasat H, Akmali V, Sharifi M (2016) Population genetic structure of the endangered Kaiser’s mountain newt, Neurergus kaiseri (Amphibia: Salamandridae). PLoS ONE 11:e0149596

    Article  Google Scholar 

  • Fathinia B, Rastegar-Pouyani N, Rastegar-Pouyani E (2018) Molecular phylogeny and historical biogeography of genera Eristicophis and Pseudocerastes (Ophidia, Viperidae). Zool Script 47:673–685

    Article  Google Scholar 

  • Fathinia B, Rastegar-Pouyani E, Shafaeipour A, (2019) A new species of Eirenis (Ophidia: Colubridae) from highland habitats in southern Iran. Zool Middle East 65:319–329

  • Fathinia B, Rödder D, Rastegar-Pouyani N, Rastegar-Pouyani E, Hosseinzadeh MS, Kazemi SM (2020) The past, current and future habitat range of the Spider-tailed Viper, Pseudocerastes urarachnoides (Serpentes: Viperidae) in western Iran and eastern Iraq as revealed by habitat modelling. Zool Middle East 66:197–205

    Article  Google Scholar 

  • Fattahi A, Rastegar-Pouyani N, Rastegar-Pouyani E, Karamiani R, Hosseinian Yousefkhani SS, Fathinia B (2020) Molecular phylogeny and taxonomic evaluation of the genus Asaccus Dixon and Anderson, 1973 (Reptilia: Phyllodactylidae) in Iran. Herpetol J 30:207–214

    Article  Google Scholar 

  • Favre A, Päckert M, Pauls SU, Jähnig SC, Uhl D, Michalak I, Muellner-Riehl AN (2015) The role of the uplift of the Qinghai-Tibetan Plateau for the evolution of Tibetan biotas. Biol Rev 90:236–253

    Article  Google Scholar 

  • Figueiredo-Vázquez C, Lourenço A, Velo-Antón G (2021) Riverine barriers to gene flow in a salamander with both aquatic and terrestrial reproduction. Evol Ecol 35:483–511

    Article  Google Scholar 

  • Firouz E (2005). The complete fauna of Iran. Bloomsbury Academic

  • Forcina G, Guerrini M, Panayides P, Hadjigerou P, Khan AA, Barbanera F (2019) Molecular taxonomy and intra-Palaearctic boundary: new insights from the biogeography of the black francolin (Francolinus francolinus) by means of microsatellite DNA. Syst Biodivers 17:759–772

    Article  Google Scholar 

  • Frechen M, Kehl M, Rolf C, Sarvati R, Skowronek A (2009) Loess chronology of the Caspian lowland in northern Iran. Quat Int 198:220–233

    Article  Google Scholar 

  • Gascon C, Malcolm JR, Patton JL, da Silva MNF, Bogart JP, Lougheed SC (2000) Riverine barriers and the geographic distribution of Amazonian species. PNAS 97:13672–13677

    Article  CAS  Google Scholar 

  • Ghaedi Z, Badri S, Saberi-Pirooz R, Vaissi S, Javidkar M, Ahmadzadeh F (2020) The Zagros Mountains acting as a natural barrier to gene flow in the Middle East: more evidence from the evolutionary history of spiny-tailed lizards (Uromasticinae: Saara). Zool J Linn Soc 192:xlaa113

    Google Scholar 

  • Ghanavi HR, Gonzalez EG, Doadrio I (2016) Phylogenetic relationships of freshwater fishes of the genus Capoeta (Actinopterygii, Cyprinidae) in Iran. Ecol Evol 6:8205–8222

    Article  Google Scholar 

  • Ghane-Ameleh S, Khosravi M, Saberi-Pirooz R, Ebrahimi E, Aghbolaghi MA, Ahmadzadeh F (2021) Mid-Pleistocene Transition as a trigger for diversification in the Irano-Anatolian region: evidence revealed by phylogeography and distribution pattern of the eastern three-lined lizard. Glob Ecol Conserv 31:e01839

    Article  Google Scholar 

  • Gholami Z, Esmaeili HR, Erpenbeck D, Reichenbacher B (2014) Phylogenetic analysis of Aphanius from the endorheic Kor River Basin in the Zagros Mountains, South-western Iran (Teleostei: Cyprinodontiformes: Cyprinodontidae). J Zool Syst Evol 52:130–141

    Article  Google Scholar 

  • Gholami Z, Esmaeili HR, Reichenbacher B (2015) New data on the zoogeography of Aphanius sophiae (Teleostei: Cyprinodontidae) in the Central Zagros (Southwest Iran). Limnologica 51:70–82

    Article  Google Scholar 

  • Gonçalves-Sousa JG, Fraga R, Menezes BS, Mesquita DO, Ávila RW (2022) Riverine barrier and aridity effects on taxonomic, phylogenetic and functional diversities of lizard assemblages from a semi-arid region. J Biogeogr 49:1021–1033

    Article  Google Scholar 

  • Goudarzi F, Hemami MR, Rancilhac L, Malekian M, Fakheran S, Elmer KR et al (2019) Geographic separation and genetic differentiation of populations are not coupled with niche differentiation in threatened Kaiser’s spotted newt (Neurergus kaiseri). Sci Rep 9:1–12

    Article  CAS  Google Scholar 

  • Grunert J (1977) Jungpleistozane Tal-und Hangentwicklung im Shir-Kuh massiv. Zentral-Iran Karlsruher Geogr Hefte 8:42–62

    Google Scholar 

  • Haddadian-Shad H, Darvish J, Rastegar-Pouyani E, Mahmoudi A (2016) Subspecies differentiation of the house mouse Mus musculus Linnaeus, 1758 in the center and east of the Iranian plateau and Afghanistan. Mammalia 81:147–168

    Google Scholar 

  • Hagedorn H, Haars W, Busche D, Förster H (1975) Zur Geomor-phologie des Shir-Kuh-Massivs (Zentral-Iran). Z Geomorphol 23:146–156

    Google Scholar 

  • Hagen O, Vaterlaus L, Albouy C, Brown A, Leugger F, Onstein RE, de Santana CN, Scotese CR, Pellissier L (2019) Mountain building, climate cooling and the richness of cold-adapted plants in the Northern Hemisphere. J Biogeogr 46:1792–1807

    Article  Google Scholar 

  • Hammer Ø, Harper DAT, Ryan PD (2001) PAST: paleontological statistics software package for education and data analysis. Palaeontol Electronica 4:9

    Google Scholar 

  • Handbook of the Birds of the World and BirdLife International (2022) Handbook of the Birds of the World and BirdLife International digital checklist of the birds of the world. Version 6b. http://datazone.birdlife.org/userfiles/file/Species/Taxonomy/HBW-BirdLife_Checklist_v6b_Jul22.zip

  • Hayes FE, Sewlal JAN (2004) The Amazon River as a dispersal barrier to passerine birds: effects of river width, habitat and taxonomy. J Biogeogr 31:1809–1818

    Article  Google Scholar 

  • Heidari N, Rastegar-Pouyani E, Rastegar-Pouyani N, Faizi H (2014) Molecular phylogeny and biogeography of the genus Acanthodactylus Fitzinger, 1834 (Reptilia: Lacertidae) in Iran, inferred from mtDNA Sequences. Zootaxa 3860:379–395

    Article  Google Scholar 

  • Hewitt G (2000) The genetic legacy of the quaternary ice ages. Nature 405:907–913

    Article  CAS  Google Scholar 

  • Hoorn C, Wesselingh FP, ter Steege H, Bermudez MA, Mora A, Sevink J et al (2010) Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science 330:927–931

    Article  CAS  Google Scholar 

  • Hoorn C, Palazzesi L, Silvestro D (2022) Editorial preface to special issue: exploring the impact of Andean uplift and climate on life evolution and landscape modification: From Amazonia to Patagonia. Glob Planet Change 211:103759

    Article  Google Scholar 

  • Hosseinian Yousefkhani SS, Aliabadian M, Rastegar- Pouyani E, Darvish J (2017) Predicting the impact of climate change on the distribution pattern of Agamura persica (Dumeril, 1856) (Squamata: Gekkonidae). Belg J Zool 147:137–142

    Google Scholar 

  • Hosseinian Yousefkhani SS, Aliabadian M, Rastegar-Pouyani E, Darvish J (2019) Taxonomic revision of the spider geckos of the genus Agamura senso lato Blanford, 1874 (Sauria: Gekkonidae) in the Iranian Plateau. Herpetological 29:1–12

    Google Scholar 

  • Hosseinzadeh M, Aliabadian M, Rastegar-Pouyani E, Rastegar-Pouyani N (2014) The roles of environmental factors on reptile richness in Iran. Amphib Reptil 35:215–225

    Article  Google Scholar 

  • Hosseinzadeh MS, Fois M, Zangi B, Kazemi SM (2020) Predicting past, current and future habitat suitability and geographic distribution of the Iranian endemic species Microgecko latifi (Sauria: Gekkonidae). J Arid Environ 183:104283

    Article  Google Scholar 

  • Jablonski D, Nagy ZT, Avcı A, Olgun K, Kukushkin OV, Safaei-Mahroo B, Jandzik D (2019) Cryptic diversity in the smooth snake (Coronella austriaca). Amphib-Reptil 40:179–192

    Article  Google Scholar 

  • Jarvis A, Reuter HI, Nelson A, Guevara E (2008) Hole-filled SRTM for the globe Version 4. The CGIAR-CSI SRTM 90m Database. https://srtm.csi.cgiar.org

  • Javanbakht H, Ihlow F, Jablonski D, Široký P, Fritz U, Rödder D et al (2017) Genetic diversity and Quaternary range dynamics in Iranian and Transcaucasian tortoises. Biol J Linn Soc 121:627–640

    Article  Google Scholar 

  • Jouladeh-Roudbar A, Ghanavi HR, Doadrio I (2020) Ichthyofauna from Iranian freshwater: annotated checklist, diagnosis, taxonomy, distribution and conservation assessment. Zool Stud 59:21

    Google Scholar 

  • Kafash A, Malakoutikhahh Sh, Yousefi M, Ataei F, Heidari H, Rastegar-Pouyani E (2018) The Gray Toad-headed Agama, Phrynocephalus scutellatus (Olivier, 1807) species complex in Iranian Plateau: the degree of niche overlap depends on the phylogenetic distance. Zool Middle East 64:47–54

    Article  Google Scholar 

  • Kafash A, Ashrafi S, Yousefi M, Rastegar-Pouyani E, Rajabizadeh M, Ahmadzadeh F, Grünig M, Pellissier L (2020) Reptile species richness associated to ecological and historical variables in Iran. Sci Rep 10:18167

    Article  CAS  Google Scholar 

  • Kafash A, Ashrafi S, Yousefi M (2021) Biogeography of bats in Iran: map** and disentangling environmental and historical drivers of bat richness. J Zool Syst Evol 59:1546–1556

    Article  Google Scholar 

  • Kafash A, Ashrafi S, Yousefi M (2022) Modeling habitat suitability of bats to identify high priority areas for field monitoring and conservation. Environ Sci Pollut Res 29:25881–25891

    Article  Google Scholar 

  • Karami M, Ghadirian T, Faizolahi K (2016) The atlas of mammals of Iran. Jahaddaneshgahi, Tehran

    Google Scholar 

  • Karamiani R, Rastegar-Pouyani N, Rastegar-Pouyani E (2017) Modeling the past and current distribution and habitat suitability for Ablepharus grayanus and A. pannonicus (Sauria: Scincidae). Asian Herpetol Res 9:56–64

    Google Scholar 

  • Kazemi S, Hosseinzadeh M (2020) High diversity and endemism of herpetofauna in the Zagros Mountains. ECOPERSIA 8:221–229

    Google Scholar 

  • Khaleghizadeh A, Roselaar K, Scott DA, Tohidifar M, Mlíkovský J, Blair M (2017) Birds of Iran: annotated checklist of the species and subspecies. IranShenasi Publishing, Tehran

    Google Scholar 

  • Khani A, Fatemizadeh F (2022) First record of the Red-footed Booby Sula sula for Iran. Mar Ornithol 50:95–97

    Google Scholar 

  • Kovačić M, Esmaeili HR, Zarei F, Abbasi K, Schliewen UK (2021) A new species of tadpole-goby, Benthophilus persicus sp. nov. (Teleostei: Gobiidae) from the southern Caspian Sea. Zootaxa 4980:4563

    Article  Google Scholar 

  • Kovar-Eder J, Kvaček Z, Martinetto E, Roiron P (2006) Late Miocene to Early Pliocene vegetation of southern Europe (7–4Ma) as reflected in the megafossil plant record. Palaeogeogr Palaeoclimatol Palaeoecol 238:321–339

    Article  Google Scholar 

  • Kovar-Eder J (2003) Vegetation dynamics in Europe during the Neogene. In: Reumer JWF, Wessels W, eds Distribution and migration of tertiary mammals in Eurasia. A volume in honour of Hans de Bruijn. Deinsea 10:373–392.

  • Krinsley DB (1970) A geomorphological and paleoclimatological study of the playas of Iran. Part I. Geological survey reston va

  • Kryštufek B, Naderi M, Janžekovič F, Hutterer R, Bombek D, Mahmoudi A (2021) A taxonomic revision of fat dormice, genus Glis (Rodentia). Mammalia 85:362–378

    Article  Google Scholar 

  • Kuhle M (2004) The Pleistocene Glaciation (LGP and pre-LGP, pre-LGM) of SE Iranian mountains Exemplified by the Kuh-i-Jupar, Kuh-i-Lalezar and Kuh-i-Hezar Massifs in the Zagros. Polarforschung 77:71–88

    Google Scholar 

  • Lambeck K (1996) Shoreline reconstructions for the Persian Gulf since the last glacial maximum. EPSL 142:43–57

    Article  CAS  Google Scholar 

  • Lateef A (1998) Some notes on the middle-late quaternary history of the caspian sea level changes. In: 4th International Conference on the Geology of the Middle East, pp 9–12

  • Lebedev VS, Shenbrot GI, Krystufek B, Mahmoudi A, Melnikova MN, Solovyeva E et al (2022) Phylogenetic relations and range history of jerboas of the Allactaginae subfamily (Dipodidae, Rodentia). Sci Rep 12:1–15

    Article  Google Scholar 

  • Liang HY, Feng ZP, Pei B, Li Y, Yang XT (2018) Demographic expansion of two Tamarix species along the Yellow River caused by geological events and climate change in the Pleistocene. Sci Rep 8:60

    Article  Google Scholar 

  • Macey JR, Shulte JA, Ananjeva NB, Larson A, Rastegar-Pouyani N, Shammakov SM et al (1998) Phylogenetic relationship among agamid lizards of the Laudakia caucasia species group: testing the hypotheses of biogeographic fragmentation and an area caldogram for the Iranian Plateau. Mol Phylogenet Evol 10:118–131

    Article  CAS  Google Scholar 

  • Macey JR, Schulte JA, Larson A, Ananjeva NB, Wang Y, Pethiyagoda Y et al (2000) Evaluating trans-Tethys migration: an example using acrodont lizard phylogenetics. Syst Biol 49:233–256

    Article  CAS  Google Scholar 

  • Mahmoudi A, Darvish J, Aliabadian M, Moghaddam FY, Kryštufek B (2017a) New insight into the cradle of the grey voles (subgenus Microtus) inferred from mitochondrial cytochrome b sequences. Mammalia 81:583–593

    Article  Google Scholar 

  • Mahmoudi A, Kryštufek B, Aliabadian M, Moghaddam FY, Darvish J (2017b) All quiet in the East: molecular analysis retrieves Chionomys layi as part of C. nivalis. J Vertebr Biol 66:67–71

    Google Scholar 

  • Mahmoudi A, Darvish J, Siahsarvie R, Dubey S, Kryštufek B (2019) Mitochondrial sequences retrieve an ancient lineage of bicolored shrew in the Hyrcanian refugium. Mamm Biol 95:160–163

    Article  Google Scholar 

  • Mahmoudi A, Maul LC, Khoshyar M, Darvish J, Aliabadian M, Kryštufek B (2020) Evolutionary history of water voles revisited: confronting a new phylogenetic model from molecular data with the fossil record. Mammalia 84:171–184

    Article  Google Scholar 

  • Makk T, Mostafavi H, Matkan A, Aghighi A (2021) Modelling climate-change impact on the spatial distribution of Garra rufa (Heckel, 1843) (Teleostei: Cyprinidae). Iran J Sci Technol Trans A Sci 45:795–804

    Article  Google Scholar 

  • Malekoutian M, Sharifi M, Vaissi S (2020) Mitochondrial DNA sequence analysis reveals multiple Pleistocene glacial refugia for the Yellow-spotted mountain newt, Neurergus derjugini (Caudata: Salamandridae) in the mid-Zagros range in Iran and Iraq. Ecol Evol 10:2661–2676

    Article  Google Scholar 

  • Mamedov A (1997) The late pleistocene-holocene history of the Caspian Sea. Quat Int 41:161–166

    Article  Google Scholar 

  • Mehdizadeh R, Akmali V, Sharifi M (2020) Population genetic structure and phylogeography of the greater horseshoe bat (Rhinolophus ferrumequinum) along Alborz and Zagros Mts. in Iran. Mitochondrial DNA Part A 31:87–97

    Article  CAS  Google Scholar 

  • Memariani F (2020) The Khorassan-Kopet Dagh mountains. In: Noroozi J (ed) Plant biogeography and vegetation of high mountains of central and South-West Asia. Springer, Cham

    Google Scholar 

  • Mohammadi Z, Darvish J, Aliabadian M, Yazdani Moghaddam F, Lissovsky AA, Olsson U (2018) Pleistocene diversification of Afghan pikas Ochotona rufescens (Gray, 1842) (Lagomorpha; Ochotonidae) in Western Asia. Mamm Biol 91:10–22

    Article  Google Scholar 

  • Morley CK, Kongwung B, Julapour AA, Abdolghafourian M, Hajian M, Waples D et al (2009) Structural development of a major late Cenozoic basin and transpressional belt in central Iran: the Central Basin in the Qom-Saveh area. Geosphere 5:325–362

    Article  Google Scholar 

  • Mousavi-Sabet H, Eagderi S, Vatandoust S, Freyhof J (2021a) Five new species of the sisorid catfish genus Glyptothorax from Iran (Teleostei: Sisoridae). Zootaxa 5067:451–484

    Article  Google Scholar 

  • Mousavi-Sabet H, Sarpanah A, Avani A (2021b) First record of the exotic Poecilia latipinna (Lesueur, 1821) from the Anzali Lagoon in the southern Caspian Sea basin. Iran Poeciliid Res 11:1–5

    Google Scholar 

  • Mouthereau F (2001) Timing of uplift in the Zagros belt/Iranian plateau and accommodation of late Cenozoic Arabia-Eurasia convergence. Geol Mag 148:726–738

    Article  Google Scholar 

  • Mouthereau F, Lacombe O, Vergés J (2012) Building the Zagros collisional orogen: timing, strain distribution and the dynamics of Arabia/Eurasia plate convergence. Tectonophysics 532:27–60

    Article  Google Scholar 

  • Naderi G, Kaboli M, Koren T, Karami M, Zupan S, Rezaei HR et al (2014) Mitochondrial evidence uncovers a refugium for the fat dormouse (Glis glis Linnaeus, 1766) in Hyrcanian forests of northern Iran. Mamm Biol 79:202–207

    Article  Google Scholar 

  • Najafi N, Akmali V, Sharifi M (2019) Historical explanation of genetic variation in the Mediterranean horseshoe bat Rhinolophus euryale (Chiroptera: Rhinolophidae) inferred from mitochondrial cytochrome-b and D-loop genes in Iran. Mitochondrial DNA A DNA Mapp Seq Anal 30:135–147

    CAS  Google Scholar 

  • Najibzadeh M, Gharzi A, Rastegar-Pouyani N, Rastegar-Pouyani E, Pesarakloo A (2018) Genetic structure of the hyrcanian wood frog, Rana pseudodalmatina (Amphibia: Ranidae) using mtDNA gene sequences. Russ J Genet 54:1221–1228

    Article  CAS  Google Scholar 

  • Najibzadeh M, Ehl S, Feldmeier S, Pesarakloo A, Veith M (2021) Unequal sisters: past and potential future range development of Anatolian and Hyrcanian brown frogs. Zoology 144:125873

    Article  CAS  Google Scholar 

  • Naka LN, Brumfield RT (2018) The dual role of Amazonian rivers in the generation and maintenance of avian diversity. Sci Adv 4:eaar8575

    Article  Google Scholar 

  • Narouei M, Javadi SA, Khodagholi M, Jafari M, Azizinejad R (2021) Modeling the effects of climate change on the potential distribution of the rangeland species Gymnocarpus decander Forssk (case study: Arid region of southeastern Iran). Environ Monit Assess 194:33

    Article  Google Scholar 

  • Nazarizadeh M, Kaboli M, Rezaie HR, Harisini JI, Pasquet E (2016) Phylogenetic relationships of Eurasian Nuthatches (Sitta europaea Linnaeus, 1758) from the Alborz and Zagros Mountains, Iran. Zool Middle East 62:217–226

    Article  Google Scholar 

  • Noroozi J, Akhani H, Breckle SW (2008) Biodiversity and phytogeography of the alpine flora of Iran. Biodivers Conserv 17:493–521

    Article  Google Scholar 

  • Noroozi J, Talebi A, Doostmohammadi M, Rumpf SB, Linder HP, Schneeweiss GM (2018) Hotspots within a global biodiversity hotspot - areas of endemism are associated with high mountain ranges. Sci Rep 8:10345

    Article  Google Scholar 

  • Noroozi J, Naqinezhad A, Talebi A, Doostmohammadi M, Plutzar C, Rumpf SB, Asgarpour Z, Schneeweiss GM (2019) Hotspots of vascular plant endemism in a global biodiversity hotspot in Southwest Asia suffer from significant conservation gaps. Biol Conserv 237:299–307

    Article  Google Scholar 

  • Olson DM, Dinerstein E, Wikramanayake ED, Burgess ND, Powell GVN, Underwood EC et al (2001) Terrestrial ecoregions of the world: A new map of Life on Earth: a new global map of terrestrial ecoregions provides an innovative tool for conserving biodiversity. Bioscience 51:933–938

    Article  Google Scholar 

  • Perktaş U, Barrowcloug GF, Groth JG (2011) Phylogeography and species limits in the green woodpecker complex (Aves: Picidae): multiple Pleistocene refugia and range expansion across Europe and the Near East. Biol J Linn Soc 104:710–723

    Article  Google Scholar 

  • Perktas U, Barrowclough GF, Groth JG (2011) Phylogeography and species limits in the green woodpecker complex (Aves: Picidae): Multiple pleistocene refugia and range expansion across Europe and the Near East. Biol J Linn Soc 104:710–723

    Article  Google Scholar 

  • Pirani RM, Werneck FP, Thomaz AT, Kenney ML, Sturaro MJ, Ávila-Pires TCS, Peloso PLV, Rodrigues MT, Knowles LL (2019) Testing main Amazonian rivers as barriers across time and space within widespread taxa. J Biogeogr 46:2444–2456

    Article  Google Scholar 

  • Pourebrahimi S, Mirshamsi O, Ghasempouri SM, Moghaddam FY, Aliabadian M (2022) Phylogeny and evolutionary history of the Sombre Tit, Poecile lugubris in the western Palearctic (Aves, Paridae). Mol Phylogenet Evol 167:107343

    Article  CAS  Google Scholar 

  • Preu, C (1984) Die quartäre Vergletscherung der inneren Zardeh-Kuh-Gruppe (Zardeh-Kuh-Massiv), Zagros/Iran

  • Rahimian H, Shafiei S, Pouyani NR, Pouyani ER (2015) Phylogenetic relationships of the gray-toad agama, Phrynocephalus scutellatus (Olivier, 1807), species complex from Iran. Zootaxa 3990:369–380

    Article  Google Scholar 

  • Rajabizadeh M (2018) Snakes of Iran. IranShenasi Publishing, Tehran

    Google Scholar 

  • Rajabizadeh M, Javanmardi S, Rastegar-Pouyani N, Karamiani R, Yusefi M, Salehi H et al (2011) Geographic variation, distribution and habitat of Natrix tessellata (Laurenti, 1768) (Serpentes: Colubridae) in Iran. Mertensiella 18:414–429

    Google Scholar 

  • Rajabizadeh M, Nagy ZT, Adriaens D, Avci A, Masroor R, Schmidtler J et al (2016) Alpine-Himalayan orogeny drove correlated morphological, molecular, and ecological diversification in the Persian dwarf snake (Squamata: Serpentes: Eirenis persicus). Zool J Linn Soc 176:878–913

    Article  Google Scholar 

  • Ramezani E, Marvie Mohadjer MR, Knapp HD, Ahmadi H, Joosten H (2008) The late-Holocene vegetation history of the Central Caspian (Hyrcanian) forests of northern Iran. Holocene 18:307–321

    Article  Google Scholar 

  • Ranjbar N, Malekian M, Ashrafzadeh MR, Hemami MR (2022) Phylogeographic and phenotypic divergence between two subspecies of Testudo graeca (T. g. buxtoni and T. g. zarudnyi) across their contact zone in Iran. Sci Rep 12:13579

    Article  CAS  Google Scholar 

  • Rastegar-Pouyani E, Rastegar-Pouyani N, Kazemi-Noureini S, Joger U, Wink M (2010) Molecular phylogeny of the Eremias persica complex of the Iranian plateau (Reptilia: Lacertidae), based on mtDNA sequences. Zool J Linn Soc 158:641–660

    Article  Google Scholar 

  • Rastegar-Pouyani E, Kazemi-Noureini S, Rastegar-Pouyani N, Joger U, Wink M (2012) Molecular phylogeny and intraspecific differentiation of the Eremias velox complex of the Iranian Plateau and Central Asia (Sauria, Lacertidae). J Zool Syst Evol 50:220–229

    Article  Google Scholar 

  • Rastegar-Pouyani E, Ebrahimipour F, Hosseinian S (2017) Genetic variability and differentiation among the populations of Dice snake, Natrix tessellata (Sepentes, Colubridae) in the Iranian Plateau. Biochem Syst Ecol 72:23–28

    Article  CAS  Google Scholar 

  • Rezazadeh E, Aliabadian M, Darvish J, Ahmadzadeh F (2020) Diversification and evolutionary history of brushtailed mice, Calomyscidae (Rodentia), in southwestern Asia. Org Divers Evol 20:155–170

    Article  Google Scholar 

  • Regard V, Bellier O, Braucher R, Gasse F, Bourlès D, Mercier J, Thomas JC, Abbassi MR, Shabanian E, Soleymani S (2006) 10Be dating of alluvial deposits from Southeastern Iran (the Hormoz Strait area). Palaeogeogr Palaeoclimatol Palaeoecol 242:36–53.

  • Rose J, Ehlers J, Gibbard PL, Porter SC, Ingólfsson Ó, Coronato A et al (2004) Quaternary Glaciations Extent and Chronology Part III: South America, Asia, Africa, Australasia, Antarctica

  • Saberi-Pirooz R, Ahmadzadeh F, Ataei S, Taati M, Qashqaei AT, Carretero MA (2018) A phylogenetic assessment of the meadow lizard Darevskia praticola (Eversmann, 1834) from Iran. Zootaxa 4441:46–58

    Article  Google Scholar 

  • Saberi-Pirooz R, Shahriari A, Ahmadzadeh F, Javidkar M, Oladi M, Aghbolaghi MA (2019) Dispersal beyond geographic barriers: a contribution to the phylogeny and demographic history of Pristurus rupestris Blanford, 1874 (Squamata: Sphaerodactylidae) from southern Iran. Zoology 134:8–15

    Article  Google Scholar 

  • Saberi-Pirooz R, Rajabi-Maham H, Ahmadzadeh F, Kiabi BH, Javidkar M, Carretero MA (2021) Pleistocene climate fluctuations as the major driver of genetic diversity and distribution patterns of the Caspian green lizard, Lacerta strigata Eichwald, 1831. Ecol Evol 2021:1–14

    Google Scholar 

  • Safaei-Mahroo B, Ghaffari H, Fahimi H, Broomand S, Yazdanian M, Najafi Majd E, Hosseinian S, Rezazadeh E, Hosseinzadeh M, Nasrabadi R, Radjabizadeh M, Mashayekhi M, Motesharei A, Naderi A, Kazemi SM (2015) The herpetofauna of Iran: Checklist of taxonomy, distribution and conservation status. Asian Herpetol Res 6:257–290.

  • Safaei-Mahroo B, Ghaffari H (2020) The complete guide to amphibians of Iran: biology, ecology, and conservation. University of Kurdistan, Sanandaj

    Google Scholar 

  • Sanchooli N, Rastegar-Pouyani E, Hosseinian S (2018) Genetic variability among Paralaudakia microlepis (Blanford, 1874) (Sauria: Agamidae) populations in the Iranian Plateau. Zootaxa 4526:245–250

    Article  Google Scholar 

  • Sandel B, Arge L, Dalsgaard B, Davies RG, Gaston KJ, Sutherland WJ, Svenning JC (2011) The influence of Late Quaternary climate-change velocity on species endemism. Science 334:660–664

    Article  CAS  Google Scholar 

  • Schwarzer J, Shabani N, Esmaeili HR, Mwaiko S, Seehausen O (2017) Allopatric speciation in the desert: diversification of cichlids at their geographical and ecological range limit in Iran. Hydrobiologia 791:193–207

    Article  CAS  Google Scholar 

  • Schweizer G (1975) Untersuchungen zur Physiogeographie von Ostanatolien und Nordwestiran: geomorphologische, klima-und hydrogeographische Studien in Vansee-und Rezaiyehsee-Gebiet. Selbstverlag des Geographischen Instituts der Universität Tübingen

  • Shahabi S, Akmali V, Sharifi M (2017) Taxonomic Evaluation of the Greater Horseshoe Bat Rhinolophus ferrumequinum (Chiroptera: Rhinolophidae) in Iran Inferred from the Mitochondrial D-Loop Gene. Zool Sci 34:361–367

    Article  Google Scholar 

  • Shahamat AA, Rastegar-Pouyani E, Rastegar-Pouyani N, Hosseinian Yousefkhani SS, Wink M (2020) Molecular phylogeny and intraspecific differentiation of the Trapelus agilis species complex in Iran (Squamata: Agamidae) inferred from mitochondrial DNA sequences. PeerJ 8:e8295

    Article  Google Scholar 

  • Sheykhi Ilanloo S, Khani A, Kafash A, Valizadegan N, Ashrafi S, Loercher F, Ebrahimi E, Yousefi M (2020) Applying opportunistic observations to model current and future suitability of the Kopet Dagh Mountains for a Near Threatened avian scavenger. Avian Biol Res 14:18–26

    Article  Google Scholar 

  • Shokouhi A, Bakhtiari P, Khaleghizadeh A (2018) First confirmed record of Bank Myna Acridotheres ginginianus from Iran with previous reports from the Tehran urban environment. Sandgrouse 40:36–37

    Google Scholar 

  • Sindaco R, Jeremcenko VK (2008) The reptiles of the Western Palearctic vol. 1. Annotated checklist and distributional atlas of the turtles, crocodiles, amphisbaenians and lizards of Europe, North Africa, Middle East and Central Asia. Edizioni Belvedere, Latina.

  • Šmíd J, Frynta D (2012) Genetic variability of Mesalina watsonana (Reptilia: Lacertidae) on the Iranian plateau and its phylogenetic and biogeographic affinities as inferred from mtDNA sequences. Acta Herpetol 7:139–153

    Google Scholar 

  • Snethlage MA, Geschke J, Ranipeta A, Jetz W, Yoccoz NG, Körner C, Spehn EM, Fischer M, Urbach D (2022) A hierarchical inventory of the world’s mountains for global comparative mountain science. Sci Data 9:149

    Article  Google Scholar 

  • Steinfartz S, Hwang UW, Tautz D, Öz M, Veith M (2002) Molecular phylogeny of the salamandrid genus Neurergus: evidence for an intrageneric switch of reproductive biology. Amph-Rept 23:419–431

    Article  Google Scholar 

  • Stewart JR, Lister AM, Barnes I, Dalén L (2010a) Refugia revisited: individualistic responses of species in space and time. Proc R Soc B Biol Sci 277:661–671

    Article  Google Scholar 

  • Stewart JR, Lister AM, Barnes I, Dalén L (2010b) Refugia revisited: individualistic responses of species in space and time. Proc Biol Sci 277:661–671

    Google Scholar 

  • Stümpel N, Rajabizadeh M, Avcı A, Wüster W, Joger U (2016) Phylogeny and diversifi cation of mountain vipers (Montivipera, Nilson et al. 2001) triggered by multiple Plio-Pleistocene refugia and high-mountain topography in the Near and Middle East. Mol Phylogenet Evol 101:336–351

    Article  Google Scholar 

  • Svenning JC, Skov F (2007) Ice age legacies in the geographical distribution of tree species richness in Europe. Glob Ecol Biogeogr 16:234–245

    Article  Google Scholar 

  • Teimori A, Esmaeili HR (2020) Hormuz River System as a micro hotspot of diversification for the aphaniid fishes in Iran. Iran J Ichthyol 7:181–196

    Google Scholar 

  • Teimori A, Esmaeili HR, Hamidan N, Reichenbacher B (2018) Systematics and historical biogeography of the Aphanius dispar species group (Teleostei: Aphaniidae) and description of a new species from Southern Iran. J Zool Syst Evol Res 56:579–598

    Article  Google Scholar 

  • Thom G, Xue AT, Sawakuchi AO, Ribas CC, Hickerson MJ, Aleixo A, Miyaki C (2020) Quaternary climate changes as speciation drivers in the Amazon floodplains. Sci Adv 6:eaax4718

    Article  CAS  Google Scholar 

  • Thorne JH, Gogol-Prokurat M, Hill S, Walsh D, Boynton RM, Choe H (2020) Vegetation refugia can inform climate-adaptive land management under global warming. Front Ecol Environ 18:281–287

    Article  Google Scholar 

  • Turkozan O, Karacaoğlu Ç, Parham JF (2021) Reconstructions of the past distribution of Testudo graeca mitochondrial lineages in the Middle East and Transcaucasia support multiple refugia since the Last Glacial Maximum. Herpetol J 31:10–17

    Article  Google Scholar 

  • Vaissi S (2021) Historic range dynamics in Kaisers’s mountain newt (Neurergus kaiseri): insights from phylogeographic analyses and species distribution modelling. Ecol Evol 2021:1–12

    Google Scholar 

  • Veith M, Schmidtler JF, Kosuch J, Baran I, Seitz A (2003) Palaeoclimatic changes explain Anatolian mountain frog evolution: a test for alternating vicariance and dispersal events. Mol Ecol 12:185–199

    Article  CAS  Google Scholar 

  • Vita-Finzi C (1968) Late quaternary alluvial chronology of Iran. Geol Rundsch 58:951–973

    Article  Google Scholar 

  • Wiens JJ, Donoghue MJ (2004) Historical biogeography, ecology and species richness. Trends Ecol Evol 19:639–644

    Article  Google Scholar 

  • Wiens JJ, Graham CH (2005) Niche conservatism: Integrating evolution, ecology, and conservation biology. Annu Rev Ecol Evol Syst 36:519–539

    Article  Google Scholar 

  • **ng Y, Ree RH (2017) Uplift-driven diversification in the Hengduan Mountains, a temperate biodiversity hotspot. PANS 114:E3444–E3451

    CAS  Google Scholar 

  • Yannic G, Burri R, Malikov VG, Vogel P (2012) Systematics of snow voles (Chionomys, Arvicolinae) revisited. Mol Phylogenet Evol 62:806–815

    Article  Google Scholar 

  • Yousefabadi F, Rastegar Pouyani E, Keikhosravi A, Rastegar Pouyani N, Avcı A, Üzüm N et al (2021) An integrative approach uncovered variation within Trapelus ruderatus (Olivier, 1804) (Squamata: Agamidae) in Western Asia. J Zool Syst Evol Res 59:1530–1545

    Article  Google Scholar 

  • Yousefi M, Ahmadi M, Nourani E, Behrooz R, Rajabizadeh M, Geniez P et al (2015) Upward altitudinal shifts in habitat suitability of mountain vipers since the Last Glacial Maximum. PLoS ONE 10:e0138087

    Article  Google Scholar 

  • Yousefi M, Kafash A, Valizadegan N, Ilanloo SS, Rajabizadeh M, Malekoutikhah S, Yousefkhani SSH, Ashrafi S (2019) Climate change is a major problem for biodiversity conservation: A systematic review of recent studies in Iran. Contemp Probl Ecol 12:394–403.

  • Yousefi M, Shabani AA, Azarnivand H (2020) Reconstructing distribution of the Eastern Rock Nuthatch during the last glacial maximum and last interglacial. Avian Biol Res 13:3–9

    Article  Google Scholar 

  • Yousefi M, Mahmoudi A, Kafash A, Khani A, Kryštufek B (2022a) Biogeography of rodents in Iran: species richness, elevational distribution and their environmental correlates. Mammalia 86:309–320

    Article  Google Scholar 

  • Yousefi M, Kafash A, Nicolaï M (2022b) Reptile richness and genetic divergence patterns were shaped by current and past climate in and around the Irano-Anatolian global biodiversity hotspot: implications for conservation. Divers Distrib. https://doi.org/10.1111/ddi.13616

    Article  Google Scholar 

  • Yousefi M, Naderloo R, Keikhosravi A (2022c) Freshwater crabs of the Near East: Increased extinction risk from climate change and underrepresented within protected areas. Glob Ecol Conserv 38:e02266

    Article  Google Scholar 

  • Yousofi S, Rastegar-Pouyani E, Hojati V (2015) Phylogenetic relationships among populations of Pristurus rupestris Blanford, 1874 (Sauria: Sphaerodactylidae) in southern Iran. Turk J Zool 39:447–451

    Article  Google Scholar 

  • Yusefi GH (2021) Conservation biogeography of the terrestrial mammals in Iran: diversity patterns, and vulnerability to climate change and extinction. Front Biogeogr. https://doi.org/10.21425/F5FBG49765

    Article  Google Scholar 

  • Yusefi GH, Faizolahi K, Darvish J, Safi K, Brito JC (2019) The species diversity, distribution, and conservation status of the terrestrial mammals of Iran. J Mamm 100:55–71

    Article  Google Scholar 

  • Zarei F, Esmaeili HR, Schliewen UK, Abbasi K, Sayyadzade G (2021) Mitochondrial phylogeny, diversity, and ichthyogeography of gobies (Teleostei: Gobiidae) from the oldest and deepest Caspian sub-basin and tracing source and spread pattern of an introduced Rhinogobius species at the tricontinental crossroad. Hydrobiologia 848:1267–1293

    Article  Google Scholar 

  • Zarei F, Esmaeili HR, Kovačić M, Schliewen UK, Keyvan A (2022) Ponticola hircaniaensis sp. nov., a new and critically endangered gobiid species (Teleostei: Gobiidae) from the southern Caspian Sea basin. Zootaxa 5154:401–430

    Article  Google Scholar 

  • Zareian H, Esmaeili HR, Gholamhosseini A, Japoshvili B, Özuluğ M, Mayden RL (2018a) Diversity, mitochondrial phylogeny, and ichthyogeography of the Capoeta capoeta complex (Teleostei: Cyprinidae). Hydrobiologia 806:363–409

    Article  CAS  Google Scholar 

  • Zareian H, Esmaeili HR, Gholamhosseini A, Alwan N, Coad BW (2018b) Comments on the Mond Scraper, Capoeta mandica (Teleostei: Cyprinidae): re-description, molecular systematics and distribution modeling. J Ichthyol 58:283–295

    Article  Google Scholar 

  • Zare-Shahraki M, Ebrahimi-Dorche E, Bruder A, Flotemersch J, Blocksom K, Banaduc D (2022) Fish species composition, distribution and community structure in relation to environmental variation in a semi-arid mountainous river basin, Iran. Water 14:2226

    Article  Google Scholar 

Download references

Acknowledgements

We thank Ollie Thomas for reviewing our manuscript. We also thank Arash Jouladeh-Roudbar for providing an annotated checklist of freshwater fishes of Iran to be included in this study.

Funding

The authors declare that no funds, grants, or other support were received during the preparation of this manuscript.

Author information

Authors and Affiliations

Authors

Contributions

MY had the idea for the article. MY performed the literature search. The first draft of the manuscript was written by MY with contribution from AM, SV, and AK. All authors read and approved the final manuscript.

Corresponding author

Correspondence to Masoud Yousefi.

Ethics declarations

Conflict of interest

The authors declare they have no financial or non-financial conflict of interest to disclose.

Ethical approval

Not applicable.

Consent to participate

Not applicable.

Consent for publication

All authors consent for the publication of this study.

Additional information

Communicated by Dirk Sven Schmeller.

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary file1 (PDF 1111 kb)

Rights and permissions

Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Yousefi, M., Mahmoudi, A., Vaissi, S. et al. Diversity, diversification and distribution of Iranian vertebrates: the legacy of mountains uplifting, past climatic oscillations, sea level fluctuations and geographical barriers. Biodivers Conserv 32, 7–36 (2023). https://doi.org/10.1007/s10531-022-02499-2

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10531-022-02499-2

Keywords

Navigation