Abstract
MicroRNAs, or miRNAs, may involve in coagulation and inflammation pathways caused by severe Coronavirus disease (COVID-19). Accordingly, this attempt was made to explore the behavior of peripheral blood mononuclear cells (PBMCs) miRNAs as effective biomarkers to diagnose COVID-19 patients with normal and abnormal coagulation indices. We selected the targeted miRNAs (miR-19a-3p, miR-223-3p, miR-143-5p, miR-494-3p and miR-301a-5p) according to previous reports, whose PBMC levels were then determined by real-time PCR. Receiver operating characteristic (ROC) curve was obtained to clarify the diagnostic potency of studied miRNAs. The differentially expressed miRNA profiles and corresponding biological activities were predicted in accordance with bioinformatics data. Targeted miRNAs' expression profiles displayed a significant difference between COVID-19 subjects with normal and abnormal coagulation indices. Moreover, the average miR-223-3p level expressed in COVID-19 cases with normal coagulation indices was significantly lower than that in healthy controls. Based on data from ROC analysis, miR-223-3p and miR-494-3p are promising biomarkers to distinguish the COVID-19 cases with normal or abnormal coagulation indices. Bioinformatics data highlighted the prominent role of selected miRNAs in the inflammation and TGF-beta signaling pathway. The differences existed in the expression profiles of selected miRNAs between the groups introduced miR-494-3p and miR-223-3p as potent biomarkers to prognosis the incidence of COVID-19.
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Abbreviations
- qRT-PCR:
-
Quantitative real-time polymerase chain reactions
- COVID-19:
-
Coronavirus disease of 2019
- ROC:
-
Receiver operating characteristic
- SARS-CoV-2:
-
Severe acute respiratory syndrome coronavirus 2
- ssRNA:
-
Single-strand RNA viruses
- ARDS:
-
Acute respiratory distress syndrome
- ACE2:
-
Angiotensin-converting enzyme 2
- TNF-α:
-
Tumor necrosis factor alpha
- DIC:
-
Disseminated intravascular coagulation
- TF:
-
Tissue factor
- NF-κB:
-
Nuclear factor kappa-light-chain-enhancer of activated B cells
- IL-2:
-
Interleukin-2
- RdRp:
-
RNA-dependent RNA polymerase
- STRING:
-
Search tool for the retrieval of interacting genes/proteins
- IFITM1:
-
IFN-induced transmembrane protein 1
- STAT:
-
Signal transducer and activator of transcription
- RIG-I:
-
Retinoic acid-inducible gene I
- ZMAT3:
-
Zinc finger matrin-type 3
- MXD1:
-
MAX dimerization protein 1
- ESR1:
-
Estrogen receptor 1
- RRAGD:
-
Ras related GTP binding D
- NFIA:
-
Nuclear factor I A
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This project was supported by the Infectious and Tropical Diseases Research Center, Tabriz University of Medical Sciences, Tabriz, Iran (IR.TBZMED.REC.1401.276), and Iraqi Ministry of Higher Education and Scientific Research, Iraq.
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NF and HBB design the experiments and supervised the research. AKHAK, JSN, AS, HM, MM, carried out the experiment, analyzed data, wrote and revised the manuscript. AB, PSH and RR contributed to the data collection and drafting of the manuscript. Each scholar verified the resulting version to submit the paper.
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Kasho, A.K.A., Nahand, J.S., Salmaninejad, A. et al. PBMC MicroRNAs: Promising Biomarkers for the Differential Diagnosis of COVID-19 Patients with Abnormal Coagulation Indices. Curr Microbiol 80, 248 (2023). https://doi.org/10.1007/s00284-023-03365-2
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DOI: https://doi.org/10.1007/s00284-023-03365-2