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Organic Fertilizers Shape Soil Microbial Communities and Increase Soil Amino Acid Metabolites Content in a Blueberry Orchard

  • Soil Microbiology
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Abstract

The decline in soil nutrients is becoming a major concern of soil degradation. The possibility of using organic waste as a soil additive to increase nutrients and essential components is significant in soil quality protection and waste management. The aim of this study was to investigate the effects of composted spent mushroom substrate (MS), giant panda feces (PF), and cattle manure (CM) as organic fertilizers in soil microbial communities and metabolites in blueberry orchard in China, which were measured by using high-throughput sequencing and gas chromatography-mass spectrometry (GC-MS)-based metabolomics. Altogether, 45.66% of the bacterial operational taxonomic units (OTUs) and 9.08% of the fungal OTUs were detected in all treatments. Principal coordinates analysis demonstrated that the bacterial and fungal communities in MS and PF treatments were similar, whereas the communities in the not-organic fertilized control (CK) were significantly different from those in the organic fertilizer treatments. Proteobacteria, Acidobacteria, and Bacteroidetes were the dominant bacterial phyla, and Basidiomycota, Ascomycota, and Mortierellomycota the dominant fungal phyla. Redundancy analysis indicated that pH and available potassium were the main factors determining the composition of microbial communities. The fungal genera Postia, Cephalotrichum, and Thermomyces increased in organic fertilizer treatments, and likely promoted the degradation of organic fertilizers into low molecular-weight metabolites (e.g., amino acids). PCA and PLS-DA models showed that the metabolites in CK were different from those in the other three treatments, and those in CM were clearly different from those in MS and PF. Co-occurrence network analysis showed that several taxa correlated positively with amino acid contents. The results of this study provide new insights into organic waste reutilization and new directions for further studies.

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Availability of Data and Material

The datasets used or analyzed during the current study are available from the corresponding author on reasonable request.

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Acknowledgements

This work was supported by the Key Laboratory of State Forestry and Grassland Administration on Conservation Biology of Rare Animals in the Giant Panda National Park, the China Conservation and Research Center for the Giant Panda (KLSFGAGP2020.003), and the Department of Science and Technology of Sichuan Province (2020YJ0338, 2020ZHCG0044, 21GJHZ0113).

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Authors and Affiliations

  1. College of Resources, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China

    Yulan Tan, **g Wang, **umei Yu, Petri Penttinen, Ke Zhao & Likou Zou

  2. Key Laboratory of State Forestry and Grassland Administration (SFGA) on Conservation Biology of Rare Animals in the Giant Panda National Park, the China Conservation and Research Center for the Giant Panda (CCRCGP), Dujiangyan, 611830, China

    Yongguo He

  3. College of Food Science, Sichuan Agricultural University, Ya’an, Sichuan, 625014, China

    Shujuan Chen, Shuliang Liu & Yong Yang

  4. Sichuan Agricultural University, No. 211, Huimin Road, Wenjiang District, Chengdu Sichuan, 611130, China

    Ke Zhao & Likou Zou

Authors
  1. Yulan Tan
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  2. **g Wang
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  3. Yongguo He
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  4. **umei Yu
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  5. Shujuan Chen
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  6. Petri Penttinen
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  7. Shuliang Liu
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  8. Yong Yang
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  9. Ke Zhao
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  10. Likou Zou
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Contributions

Investigation, methodology, visualization, and writing-original draft: YT. Software, formal analysis, and project administration: JW. Conceptualization: YH. Investigation and project administration: KZ. Methodology: XY. Data curation and software: SC. Investigation and data curation: PP. Investigation and project administration: SL. Investigation and data curation: YY. Conceptualization, supervision, writing-review and editing and project administration: LZ. All authors read and approved the final manuscript.

Corresponding authors

Correspondence to Ke Zhao or Likou Zou.

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Competing Interests

The authors declare no competing interests.

Additional information

Yulan Tan and **g Wang are contributed equally

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Tan, Y., Wang, J., He, Y. et al. Organic Fertilizers Shape Soil Microbial Communities and Increase Soil Amino Acid Metabolites Content in a Blueberry Orchard. Microb Ecol 85, 232–246 (2023). https://doi.org/10.1007/s00248-022-01960-7

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  • DOI: https://doi.org/10.1007/s00248-022-01960-7

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