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Genome-wide identification of the MED25 BINDING RING-H2 PROTEIN gene family in foxtail millet (Setaria italica L.) and the role of SiMBR2 in resistance to abiotic stress in Arabidopsis

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Abstract

Main conclusion

The SiMBR genes in foxtail millet were identified and studied. Heterologous expression of SiMBR2 in Arabidopsis can improve plant tolerance to drought stress by decreasing the level of reactive oxygen species.

Abstract

Foxtail millet (Setaria italica L.), a C4 crop recognized for its exceptional resistance to drought stress, presents an opportunity to improve the genetic resilience of other crops by examining its unique stress response genes and understanding the underlying molecular mechanisms of drought tolerance. In our previous study, we identified several genes linked to drought stress by transcriptome analysis, including SiMBR2 (Seita.7G226600), a member of the MED25 BINDING RING-H2 PROTEIN (MBR) gene family, which is related to protein ubiquitination. Here, we have identified ten SiMBR genes in foxtail millet and conducted analyses of their structural characteristics, chromosomal locations, cis-acting regulatory elements within their promoters, and predicted transcription patterns specific to various tissues or developmental stages using bioinformatic approaches. Further investigation of the stress response of SiMBR2 revealed that its transcription is induced by treatments with salicylic acid and gibberellic acid, as well as by salt and osmotic stresses, while exposure to high or low temperatures led to a decrease in its transcription levels. Heterologous expression of SiMBR2 in Arabidopsis thaliana enhanced the plant's tolerance to water deficit by reducing the accumulation of reactive oxygen species under drought stress. In summary, this study provides support for exploring the molecular mechanisms associated with drought resistance of SiMBR genes in foxtail millet and contributing to genetic improvement and molecular breeding in other crops.

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All data generated or analyzed during this study are included in this published article and its supplementary information files.

Abbreviations

CAT:

Catalase

MBR:

MED25-BINDING RING-H2 PROTEIN

MDA:

Malondialdehyde

POD:

Peroxidase

SA:

Salicylic acid

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Acknowledgements

We thank all the colleagues in our laboratory for providing useful discussions and technical assistance. This work was supported by the National Natural Science Foundation of China (32272012), Research Project Supported by Shanxi Scholarship Council of China (No. 2021-015), the open funding of State Key Laboratory of Sustainable Dryland Agriculture, Shanxi Agricultural University (No. YJHZKF2108), and Fund Program for the Scientific Activities of Selected Returned Overseas Professionals in Shanxi Province (No. 20230003) to BZ. The Doctoral Research project of Shanxi Agricultural University (No. 2021BQ40) to HZ. The Science and Technology Innovation Young Talent Team of Shanxi Province (No. 202204051001019) to ZL and BZ. The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript.

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Experiments were designed by BZ, PY, and LZ. Bioinformatics analysis was performed by YF, YG, ZL, and BZ. Plant physiology experiments were performed by YF, RH, HZ, PY, and BZ. Plant molecular experiments were performed by YF, RH, and PY. BZ, ZL, and LZ analyzed the data and wrote the manuscript. All authors read and approved the final manuscript.

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Correspondence to Lizhen Zhang or Ben Zhang.

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Communicated by Dorothea Bartels.

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Fan, Y., Guo, Y., Zhang, H. et al. Genome-wide identification of the MED25 BINDING RING-H2 PROTEIN gene family in foxtail millet (Setaria italica L.) and the role of SiMBR2 in resistance to abiotic stress in Arabidopsis. Planta 260, 22 (2024). https://doi.org/10.1007/s00425-024-04455-6

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