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Modulating the sensing properties of Escherichia coli-based bioreporters for cadmium and mercury

  • Applied genetics and molecular biotechnology
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Abstract

Despite the large number of bioreporters developed to date, the ability to detect heavy metal(loid)s with bioreporters has thus far been limited owing to the lack of appropriate genetic systems. We here present a novel approach to modulate the selectivity and sensitivity of microbial whole-cell bioreporters (WCBs) for sensing metal(loid)s via the znt-operon from Escherichia coli, which were applied to quantify the bioavailability of these contaminants in environmental samples. The WCB harboring the fusion gene zntAp::egfp was used as a microbial metal(loid) sensor, which was turned on by the interaction between ZntR and metal(loid) ions. This design makes it possible to modulate the selectivity and sensitivity to metal(loid)s simply by changing the metal-binding property of ZntR and by disrupting the metal efflux system of E. coli, respectively. In fact, the E. coli cell-based bioreporter harboring zntAp::egfp showed multi-target responses to Cd(II), Hg(II), and Zn(II). However, the WCBs showed responses toward only Cd(II) and Hg(II) when the amino acid sequence of the metal-binding loop of ZntR was changed to CNHEPGTVCPIC and CPGDDSADC, respectively. Moreover, the sensitivity toward both Cd(II) and Hg(II) was enhanced when copA, which is known to export copper and silver, was deleted. Thus, our findings provide a strong foundation for expanding the target of WCBs from the currently limited number of genetic systems available.

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References

  • Belkin S (2003) Microbial whole-cell sensing systems of environmental pollutants. Curr Opin Microbiol 6(3):206–212

    Article  PubMed  CAS  Google Scholar 

  • Bjerketorp J, Håkansson S, Belkin S, Jansson JK (2006) Advances in preservation methods: kee** biosensor microorganisms alive and active. Curr Opin Biotechnol 17(1):43–49

    Article  PubMed  CAS  Google Scholar 

  • Branco R, Cristóvão A, Morais PV (2013) Highly sensitive, highly specific whole-cell bioreporters for the detection of chromate in environmental samples. PLoS One 8(1):e54005

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Brocklehurst KR, Hobman JL, Lawley B, Blank L, Marshall SJ, Brown NL, Morby AP (1999) ZntR is a Zn (II)-responsive MerR-like transcriptional regulator of zntA in Escherichia coli. Mol Microbiol 31(3):893–902

    Article  PubMed  CAS  Google Scholar 

  • Changela A, Chen K, Xue Y, Holschen J, Outten CE, O'Halloran TV, Mondragón A (2003) Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR. Science 301(5638):1383–1387

    Article  PubMed  CAS  Google Scholar 

  • Close DM, Ripp S, Sayler GS (2009) Reporter proteins in whole-cell optical bioreporter detection systems, biosensor integrations, and biosensing applications. Sensors 9(11):9147–9174

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Daunert S, Barrett G, Feliciano JS, Shetty RS, Shrestha S, Smith-Spencer W (2000) Genetically engineered whole-cell sensing systems: coupling biological recognition with reporter genes. Chem Rev 100(7):2705–2738

    Article  PubMed  CAS  Google Scholar 

  • DeLano WL (2002) PyMOL

  • Franke S, Grass G, Nies DH (2001) The product of the ybdE gene of the Escherichia coli chromosome is involved in detoxification of silver ions. Microbiology 147(4):965–972

    Article  PubMed  CAS  Google Scholar 

  • Good L, Nazar RN (1992) An improved thermal cycle for two-step PCR-based targeted mutagenesis. Nucleic Acids Res 20(18):4934

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Harms H, Wells MC, van der Meer JR (2006) Whole-cell living biosensors—are they ready for environmental application? Appl Microbiol Biotechnol 70(3):273–280

    Article  PubMed  CAS  Google Scholar 

  • Hong H, Park W (2014) TetR repressor-based bioreporters for the detection of doxycycline using Escherichia coli and Acinetobacter oleivorans. Appl Microbiol Biotechnol 98(11):5039–5050

    Article  PubMed  CAS  Google Scholar 

  • Hynninen A, Tõnismann K, Virta M (2010) Improving the sensitivity of bacterial bioreporters for heavy metals. Bioengineered bugs 1(2):132–138

    Article  PubMed  Google Scholar 

  • Hynninen A, Virta M (2009) Whole-cell bioreporters for the detection of bioavailable metals. Whole Cell Sensing System II. Springer, pp 31–63

  • Ibáñez MM, Checa SK, Soncini FC (2015) A single serine residue determines selectivity to monovalent metal ions in metalloregulators of the MerR family. J Bacteriol 197(9):1606–1613

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Juhasz AL, Smith E, Weber J, Rees M, Rofe A, Kuchel T, Sansom L, Naidu R (2006) In vivo assessment of arsenic bioavailability in rice and its significance for human health risk assessment. Environ Health Perspect 114(12):1826–1831

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Kang Y, Lee W, Kim S, Jang G, Kim B-G, Yoon Y (2018) Enhancing the copper-sensing capability of Escherichia coli-based whole-cell bioreporters by genetic engineering. Appl Microbiol Biotechnol 102(3):1513–1521

  • Magrisso S, Erel Y, Belkin S (2008) Microbial reporters of metal bioavailability. Microb Biotechnol 1(4):320–330

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Merulla D, Buffi N, Beggah S, Truffer F, Geiser M, Renaud P, van der Meer JR (2013) Bioreporters and biosensors for arsenic detection. Biotechnological solutions for a world-wide pollution problem. Curr Opin Biotechnol 24(3):534–541

    Article  PubMed  CAS  Google Scholar 

  • Nivens DE, McKnight T, Moser S, Osbourn S, Simpson M, Sayler G (2004) Bioluminescent bioreporter integrated circuits: potentially small, rugged and inexpensive whole-cell biosensors for remote environmental monitoring. J Appl Microbiol 96(1):33–46

    Article  PubMed  CAS  Google Scholar 

  • Rensing C, Mitra B, Rosen BP (1997) The zntA gene of Escherichia coli encodes a Zn (II)-translocating P-type ATPase. Proc Natl Acad Sci U S A 94(26):14326–14331

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Walker DJ, Clemente R, Roig A, Bernal MP (2003) The effects of soil amendments on heavy metal bioavailability in two contaminated Mediterranean soils. Environ Pollut 122(2):303–312

    Article  PubMed  CAS  Google Scholar 

  • Wang D, Hosteen O, Fierke CA (2012) ZntR-mediated transcription of zntA responds to nanomolar intracellular free zinc. J Inorg Biochem 111:173–181

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Yagur-Kroll S, Belkin S (2011) Upgrading bioluminescent bacterial bioreporter performance by splitting the lux operon. Anal Bioanal Chem 400(4):1071–1082

    Article  PubMed  CAS  Google Scholar 

  • Yoon Y, Kang Y, Chae Y, Kim S, Lee Y, Jeong S-W, An Y-J (2016a) Arsenic bioavailability in soils before and after soil washing: the use of Escherichia coli whole-cell bioreporters. Environ Sci Pollut Res 23(3):2353–2361

    Article  CAS  Google Scholar 

  • Yoon Y, Kang Y, Lee W, Kim S, Oh K, Kim B (2017) Modulating the properties of metal-sensing whole-cell bioreporters by interfering Escherichia coli metal homeostasis. J Microbiol Biotechnol

  • Yoon Y, Kim S, Chae Y, Jeong S-W, An Y-J (2016b) Evaluation of bioavailable arsenic and remediation performance using a whole-cell bioreporter. Sci Total Environ 547:125–131

    Article  PubMed  CAS  Google Scholar 

  • Yoon Y, Kim S, Chae Y, Kang Y, Lee Y, Jeong S-W, An Y-J (2016c) Use of tunable whole-cell bioreporters to assess bioavailable cadmium and remediation performance in soils. PLoS One 11(5):e0154506

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Yoon Y, Kim S, Chae Y, Kim SW, Kang Y, An G, Jeong S-W, An Y-J (2016d) Simultaneous detection of bioavailable arsenic and cadmium in contaminated soils using dual-sensing bioreporters. Appl Microbiol Biotechnol 100(8):3713–3722

    Article  PubMed  CAS  Google Scholar 

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Funding

This study was supported by the Basic Science Research Program of the National Research Foundation of Korea (NRF) funded by the Ministry of Science, ICT and Future Planning (2015R1C1A1A02037275 and 2017R1E1A1A01073894 to Y.Y.)

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Correspondence to Youngdae Yoon.

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This article did not involve any studies with human participants or animals performed by any of the authors.

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The authors declare that they have no conflict of interest.

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Kang, Y., Lee, W., Jang, G. et al. Modulating the sensing properties of Escherichia coli-based bioreporters for cadmium and mercury. Appl Microbiol Biotechnol 102, 4863–4872 (2018). https://doi.org/10.1007/s00253-018-8960-2

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  • DOI: https://doi.org/10.1007/s00253-018-8960-2

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