Abstract
With the rapid revolution in RNA/DNA sequencing technologies, it is evident that mammalian genomes express tens of thousands of long noncoding RNAs (lncRNAs). Since a large majority of lncRNAs have been functionally implicated in cancer development and progression, there is an increasing appreciation for the use of antisense oligonucleotide (ASO)-based therapies targeting lncRNAs in several cancers. Despite their great potential in therapeutic applications, their use is still limited due to cellular toxicity and shortcomings in achieving required stability in biological fluids and tissue uptake. To overcome these limitations, major changes in ASO chemistry have been introduced to generate second and third generation ASOs, including locked nucleic acids (LNA) technology. Here we describe two different LNA-ASO delivery approaches, a peritumoral administration and a systemic delivery in xenograft models of lung adenocarcinoma, that significantly reduced tumor growth without inducing toxicity.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Similar content being viewed by others
References
Dias N, Stein CA (2002) Antisense oligonucleotides: basic concepts and mechanisms. Mol Cancer Ther 1:347–355
Schoch KM, Miller TM (2017) Antisense oligonucleotides: translation from mouse models to human neurodegenerative diseases. Neuron 94:1056–1070
Crooke ST (2017) Molecular mechanisms of antisense oligonucleotides. Nucleic Acid Ther 27:70–77
Havens MA, Hastings ML (2016) Splice-switching antisense oligonucleotides as therapeutic drugs. Nucleic Acids Res 44:6549–6563
Ling H, Fabbri M, Calin GA (2013) MicroRNAs and other non-coding RNAs as targets for anticancer drug development. Nat Rev Drug Discov 12:847–865
Liang XH, Sun H, Nichols JG et al (2017) RNase H1-dependent antisense oligonucleotides are robustly active in directing RNA cleavage in both the cytoplasm and the nucleus. Mol Ther 25:2075–2092
Erickson MA, Niehoff ML, Farr SA et al (2012) Peripheral administration of antisense oligonucleotides targeting the amyloid-beta protein precursor reverses AbetaPP and LRP-1 overexpression in the aged SAMP8 mouse brain. J Alzheimers Dis 28:951–960
Viereck J, Kumarswamy R, Foinquinos A et al (2016) Long noncoding RNA Chast promotes cardiac remodeling. Sci Transl Med 8:326ra322
Bremmer-Bout M, Aartsma-Rus A, De Meijer EJ et al (2004) Targeted exon skip** in transgenic hDMD mice: a model for direct preclinical screening of human-specific antisense oligonucleotides. Mol Ther 10:232–240
Cao C, Mu Y, Hallahan DE et al (2004) XIAP and survivin as therapeutic targets for radiation sensitization in preclinical models of lung cancer. Oncogene 23:7047–7052
Stein CA, Castanotto D (2017) FDA-approved oligonucleotide therapies in 2017. Mol Ther 25:1069–1075
Rinaldi C, Wood MJA (2018) Antisense oligonucleotides: the next frontier for treatment of neurological disorders. Nat Rev Neurol 14:9–21
Reilley MJ, Mccoon P, Cook C et al (2018) STAT3 antisense oligonucleotide AZD9150 in a subset of patients with heavily pretreated lymphoma: results of a phase 1b trial. J Immunother Cancer 6:119
Kamola PJ, Kitson JD, Turner G et al (2015) In silico and in vitro evaluation of exonic and intronic off-target effects form a critical element of therapeutic ASO gapmer optimization. Nucleic Acids Res 43:8638–8650
Agrawal S, Kandimalla ER (2004) Role of toll-like receptors in antisense and siRNA [corrected]. Nat Biotechnol 22:1533–1537
Yoshida T, Naito Y, Sasaki K et al (2018) Estimated number of off-target candidate sites for antisense oligonucleotides in human mRNA sequences. Genes Cells 23:448–455
Ali MM, Akhade VS, Kosalai ST et al (2018) PAN-cancer analysis of S-phase enriched lncRNAs identifies oncogenic drivers and biomarkers. Nat Commun 9:883
Leucci E, Vendramin R, Spinazzi M et al (2016) Melanoma addiction to the long non-coding RNA SAMMSON. Nature 531:518–522
Michalik KM, You X, Manavski Y et al (2014) Long noncoding RNA MALAT1 regulates endothelial cell function and vessel growth. Circ Res 114:1389–1397
Straarup EM, Fisker N, Hedtjarn M et al (2010) Short locked nucleic acid antisense oligonucleotides potently reduce apolipoprotein B mRNA and serum cholesterol in mice and non-human primates. Nucleic Acids Res 38:7100–7111
Starckx S, Batheja A, Verheyen GR et al (2013) Evaluation of miR-122 and other biomarkers in distinct acute liver injury in rats. Toxicol Pathol 41:795–804
Sharapova T, Devanarayan V, Leroy B et al (2016) Evaluation of miR-122 as a serum biomarker for hepatotoxicity in investigative rat toxicology studies. Vet Pathol 53:211–221
Burel SA, Han SR, Lee HS et al (2013) Preclinical evaluation of the toxicological effects of a novel constrained ethyl modified antisense compound targeting signal transducer and activator of transcription 3 in mice and cynomolgus monkeys. Nucleic Acid Ther 23:213–227
Acknowledgments
This work was supported by the grants from Knut and Alice Wallenberg Foundation [KAW2014.0057], Swedish Foundation for Strategic Research [RB13-0204], Swedish Cancer Research foundation [Cancerfonden: Kontrakt no. CAN2018/591], Swedish Research Council [2017-02834], Barncancerfonden [PR2018-0090], Ingabritt Och Arne Lundbergs forskningsstiftelse, and LUA/ALF (to C.K.).
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2021 Springer Science+Business Media, LLC, part of Springer Nature
About this protocol
Cite this protocol
Statello, L., Ali, M.M., Kanduri, C. (2021). In Vivo Administration of Therapeutic Antisense Oligonucleotides. In: Cao, H. (eds) Functional Analysis of Long Non-Coding RNAs. Methods in Molecular Biology, vol 2254. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1158-6_17
Download citation
DOI: https://doi.org/10.1007/978-1-0716-1158-6_17
Publisher Name: Humana, New York, NY
Print ISBN: 978-1-0716-1157-9
Online ISBN: 978-1-0716-1158-6
eBook Packages: Springer Protocols