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  1. Structural Modeling of T9SS Outer Membrane Proteins and Their Complexes

    The type 9 secretion system (T9SS) is a recently discovered machinery that both transports cargo proteins across the Gram-negative bacterial outer...
    Christian D. Lorenz, Michael A. Curtis, James A. Garnett in Transmembrane β-Barrel Proteins
    Protocol 2024
  2. Pore-Forming VDAC Proteins of the Outer Mitochondrial Membrane: Regulation and Pathophysiological Role

    Abstract

    Voltage-dependent anion channels (VDAC1-3) of the outer mitochondrial membrane are a family of pore-forming β-barrel proteins that carry out...

    Natalia V. Belosludtseva, Mikhail V. Dubinin, Konstantin N. Belosludtsev in Biochemistry (Moscow)
    Article 01 June 2024
  3. Preparation of Protein-Enriched Outer Membrane Vesicles from Escherichia Coli for In Situ Structural Biology of Outer Membrane Proteins

    Bacterial outer membrane vesicles (OMVs) can be selectively enriched with one or more outer membrane proteins to allow the biophysical...
    Filippo Castegnaro, Björn M. Burmann, Johannes Thoma in Advanced Methods in Structural Biology
    Protocol 2023
  4. Fluorescent Labeling of Outer Membrane Proteins Using the SpyCatcher-SpyTag System

    The SpyCatcher-SpyTag system has become a popular and versatile tool for protein ligation. It is based on a small globular protein (SpyCatcher) that...
    Rachael Duodu, Dirk Linke, Jack C. Leo in Transmembrane β-Barrel Proteins
    Protocol 2024
  5. Characterization of β-Barrel Outer Membrane Proteins and Their Interactions with Chaperones by Chemical-Crosslinking Mass Spectrometry

    Chemical crosslinking-mass spectrometry (XL-MS) is an established tool that can be used to study the architecture and dynamics of proteins and...
    Antonio N. Calabrese in Transmembrane β-Barrel Proteins
    Protocol 2024
  6. Purification of Borrelia burgdorferi Outer Membrane Vesicles

    Bacterial outer membrane vesicles (OMVs) are spherical membrane constructs shed by gram-negative bacteria. OMVs produced by the Lyme disease pathogen...
    Hanna Tammisto, Kati Karvonen in Borrelia burgdorferi
    Protocol 2024
  7. Examining Protein Translocation by β-Barrel Membrane Proteins Using Reconstituted Proteoliposomes

    β-barrel membrane proteins populate the outer membrane of Gram-negative bacteria, mitochondria, and chloroplasts, playing significant roles in...
    Minh Sang Huynh, Jiaming Caitlyn Xu, Trevor F. Moraes in Transmembrane β-Barrel Proteins
    Protocol 2024
  8. Maintenance of bacterial outer membrane lipid asymmetry: insight into MlaA

    The outer membrane (OM) of Gram-negative bacteria acts as an effective barrier to protect against toxic compounds. By nature, the OM is asymmetric...

    M. Kaur, M.-P. Mingeot -Leclercq in BMC Microbiology
    Article Open access 28 May 2024
  9. Novel functions of the ER-located Hsp40s DNAJB12 and DNAJB14 on proteins at the outer mitochondrial membrane under stress mediated by CCCP

    The endoplasmic reticulum (ER) membrane provides infrastructure for intracellular signaling, protein degradation, and communication among the ER...

    Pattarawut Sopha, Tirawit Meerod, ... Piyarat Govitrapong in Molecular and Cellular Biochemistry
    Article 18 October 2023
  10. Affinity Purification of Membrane β-Barrel Proteins via Biotin-Tagged Peptidiscs

    β-barrel membrane proteins play a crucial role in bacterial pathogenesis and antibiotic resistance, making them a prime focus for the development of...
    Zhiyu Zhao, John William Young, Franck Duong van hoa in Transmembrane β-Barrel Proteins
    Protocol 2024
  11. Tackling the outer membrane: facilitating compound entry into Gram-negative bacterial pathogens

    Emerging resistance to all available antibiotics highlights the need to develop new antibiotics with novel mechanisms of action. Most of the...

    Deepanshi Saxena, Rahul Maitra, ... Sidharth Chopra in npj Antimicrobials and Resistance
    Article Open access 20 December 2023
  12. Expression, Purification, and Cryo-EM Structural Analysis of an Outer Membrane Secretin Channel

    Secretin proteins form pores in the outer membranes of Gram-negative bacteria, and as such provide a means of transporting a wide variety of...
    Rebecca Conners, Mathew McLaren, ... Vicki A. M. Gold in Transmembrane β-Barrel Proteins
    Protocol 2024
  13. Formation of Amyloid-Like Conformational States of β-Structured Membrane Proteins on the Example of OMPF Porin from the Yersinia pseudotuberculosis Outer Membrane

    Abstract

    The work presents results of the in vitro and in silico study of formation of amyloid-like structures under harsh denaturing conditions by...

    Olga D. Novikova, Tatyana V. Rybinskaya, ... Olga Yu. Portnyagina in Biochemistry (Moscow)
    Article 01 June 2024
  14. Identification and characterisation of a major outer membrane protein from Methylacidiphilum fumariolicum SolV

    The outer membrane (OM) protects Gram-negative bacteria against a hostile environment. The proteins embedded in the OM fulfil a number of tasks that...

    Changqing Liu, Rob Mesman, ... Huub J. M. Op den Camp in Antonie van Leeuwenhoek
    Article Open access 22 September 2023
  15. Outer membrane vesicles as a platform for the discovery of antibodies to bacterial pathogens

    Abstract

    Bacterial outer membrane vesicles (OMVs) are nanosized spheroidal particles shed by gram-negative bacteria that contain biomolecules derived...

    Eric K. Lei, Aruba Azmat, ... Greg Hussack in Applied Microbiology and Biotechnology
    Article Open access 24 February 2024
  16. Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages

    Abstract

    Pasteurella multocida is an important bacterial pathogen that can cause diseases in both animals and humans. Its elevated morbidity and...

    Jiaying Sun, Yee Huang, ... Yan Liu in Applied Microbiology and Biotechnology
    Article Open access 26 February 2024
  17. Extraction and Purification of Outer Membrane Vesicles and Their Associated RNAs

    Outer membrane vesicles (OMVs), produced by Gram negative-bacteria and sRNAs, are key players in cell-to-cell communication and interactions of...
    Anaïs Blache, Wafa Achouak in Bacterial Regulatory RNA
    Protocol 2024
  18. Generation of unfolded outer membrane protein ensembles defined by hydrodynamic properties

    Outer membrane proteins (OMPs) must exist as an unfolded ensemble while interacting with a chaperone network in the periplasm of Gram-negative...

    Taylor Devlin, Patrick J. Fleming, ... Karen G. Fleming in European Biophysics Journal
    Article 11 March 2023
  19. Utilizing outer membrane proteins (OMPs) as a vaccine to manage motile Aeromonas septicemia (MAS) in Nile tilapia (Oreochromis niloticus) with evaluating the vaccine immunoprotective effectiveness

    Motile aeromonads are an opportunistic and heterogenic bacteria that cause motile Aeromonas septicemia (MAS) which is accompanied with variety of...

    Aya F. Matter, Amel M. El Asley, ... Adel A. Shaheen in Aquaculture International
    Article Open access 07 May 2024
  20. New Perspectives on Crosstalks Between Bacterial Regulatory RNAs from Outer Membrane Vesicles and Eukaryotic Cells

    Regulatory small RNAs (sRNAs) help the bacteria to survive harsh environmental conditions by posttranscriptional regulation of genes involved in...
    Moumita Roy Chowdhury, Eric Massé in Bacterial Regulatory RNA
    Protocol 2024
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