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  1. Single-cell and spatial transcriptomic investigation reveals the spatiotemporal specificity of the beta-defensin gene family during mouse sperm maturation

    Low sperm motility is a significant contributor to male infertility. beta-defensins have been implicated in host defence and the acquisition of sperm...

    Guoliang Zhang, Yuanchao Sun, ... Shiduo Sun in Cell Communication and Signaling
    Article Open access 14 May 2024
  2. Transcriptomic profiling of the develo** brain revealed cell-type and brain-region specificity in a mouse model of prenatal stress

    Background

    Prenatal stress (PS) is considered as a risk factor for many mental disorders. PS-induced transcriptomic alterations may contribute to the...

    Yuhao Dong, Jie Weng, ... Yan Jiang in BMC Genomics
    Article Open access 24 February 2023
  3. Specificity of Growth and Accumulation of Flavonoids in Plants and Cell Cultures of Lychnis chalcedonica Obtained from Explants of Different Organs

    Abstract

    Flavonoids have numerous functions in plants, one of which is growth regulation. During the study, callus cultures were obtained from...

    I. F. Golovatskaya, Yu. V. Medvedeva, ... E. V. Boyko in Russian Journal of Plant Physiology
    Article 01 February 2024
  4. DART.2: bidirectional synaptic pharmacology with thousandfold cellular specificity

    Precision pharmacology aims to manipulate specific cellular interactions within complex tissues. In this pursuit, we introduce DART.2 (drug acutely...

    Brenda C. Shields, Haidun Yan, ... Michael R. Tadross in Nature Methods
    Article 14 June 2024
  5. Machine learning-based analysis of cancer cell-derived vesicular proteins revealed significant tumor-specificity and predictive potential of extracellular vesicles for cell invasion and proliferation – A meta-analysis

    Background

    Although interest in the role of extracellular vesicles (EV) in oncology is growing, not all potential aspects have been investigated. In...

    Matyas Bukva, Gabriella Dobra, ... Maria Harmati in Cell Communication and Signaling
    Article Open access 20 November 2023
  6. Single cell dynamics of tumor specificity vs bystander activity in CD8+ T cells define the diverse immune landscapes in colorectal cancer

    CD8 + T cell activation via immune checkpoint blockade (ICB) is successful in microsatellite instable (MSI) colorectal cancer (CRC) patients. By...

    Daniel Morales Borràs, Sara Verbandt, ... Abhishek D. Garg in Cell Discovery
    Article Open access 15 November 2023
  7. Evolution of a plant growth-regulatory protein interaction specificity

    Specific protein–protein interactions (PPIs) enable biological regulation. However, the evolution of PPI specificity is little understood. Here we...

    Zhe Ji, Eric J. Belfield, ... Nicholas P. Harberd in Nature Plants
    Article Open access 30 October 2023
  8. Circadian-driven tissue specificity is constrained under caloric restricted feeding conditions

    Tissue specificity is a fundamental property of an organ that affects numerous biological processes, including aging and longevity, and is regulated...

    Renrui Chen, Ziang Zhang, ... Guang-Zhong Wang in Communications Biology
    Article Open access 20 June 2024
  9. ArdA Protein Specificity against Type I Restriction–Modification Systems

    Abstract

    The ArdA DNA-mimic antirestriction proteins inhibit type I restriction−modification (RMI) systems by binding instead of DNA to RMI. The ArdA...

    A. A. Kudryavtseva, A. V. Vlasov, ... I. V. Manukhov in Molecular Biology
    Article 05 June 2024
  10. SwarmTCR: a computational approach to predict the specificity of T cell receptors

    Background

    With more T cell receptor sequence data becoming available, the need for bioinformatics approaches to predict T cell receptor specificity...

    Ryan Ehrlich, Larisa Kamga, ... Dario Ghersi in BMC Bioinformatics
    Article Open access 07 September 2021
  11. Selection of extended CRISPR RNAs with enhanced targeting and specificity

    As CRISPR effectors like Cas9 increasingly enter clinical trials for therapeutic gene editing, a future for personalized medicine will require...

    Ashley Herring-Nicholas, Hillary Dimig, ... Eric A. Josephs in Communications Biology
    Article Open access 12 January 2024
  12. An activity-specificity trade-off encoded in human transcription factors

    Transcription factors (TFs) control specificity and activity of gene transcription, but whether a relationship between these two features exists is...

    Julian Naderi, Alexandre P. Magalhaes, ... Denes Hnisz in Nature Cell Biology
    Article Open access 05 July 2024
  13. Oligomeric Structure of Yeast and Other Invertases Governs Specificity

    Invertases, or β-fructofuranosidases, are metabolic enzymes widely distributed among plants and microorganisms that hydrolyze sucrose and release...
    Elena Jiménez-Ortega, Julia Sanz-Aparicio in Macromolecular Protein Complexes V
    Chapter 2024
  14. Moonlighting enzymes: when cellular context defines specificity

    It is not often realized that the absolute protein specificity is an exception rather than a rule. Two major kinds of protein multi-specificities are...

    Munishwar Nath Gupta, Vladimir N. Uversky in Cellular and Molecular Life Sciences
    Article 24 April 2023
  15. Molecular and structural basis of anti-DNA antibody specificity for pyrrolated proteins

    Anti-DNA antibodies (Abs), serological hallmarks of systemic lupus erythematosus (SLE) and markers for diagnosis and disease activity, show a...

    Yusuke Anan, Masanori Itakura, ... Koji Uchida in Communications Biology
    Article Open access 03 February 2024
  16. Examining Galectin Binding Specificity Using Glycan Microarrays

    Glycan binding proteins (GBPs) possess the unique ability to regulate a wide variety of biological processes through interactions with highly...
    Sean R. Stowell, Lilian C. Rodrigues, ... Connie M. Arthur in Galectins
    Protocol 2022
  17. Plant–Fungal Interactions: Laser Microdissection as a Tool to Study Cell Specificity

    In the past 20 years, laser microdissection (LMD) technology has been widely applied to plant tissues, allowing to obtain new information on the role...
    Raffaella Balestrini, Fabiano Sillo in Plant Pathology
    Protocol 2022
  18. Cell Cycle–Specific Protein Phosphatase 1 (PP1) Substrates Identification Using Genetically Modified Cell Lines

    The identification of protein phosphatase 1 (PP1) holoenzyme substrates has proven to be a challenging task. PP1 can form different holoenzyme...
    Dorothee C Kommer, Konstantinos Stamatiou, Paola Vagnarelli in Cell Cycle Control
    Protocol 2024
  19. GABA decrease is associated with degraded neural specificity in the visual cortex of glaucoma patients

    Glaucoma is an age-related neurodegenerative disease of the visual system, affecting both the eye and the brain. Yet its underlying metabolic...

    Ji Won Bang, Carlos Parra, ... Kevin C. Chan in Communications Biology
    Article Open access 29 June 2023
  20. Dual-specificity Tyrosine Phosphorylation-regulated Kinase Inhibitor ID-8 Promotes Human Somatic Cell Reprogramming by Activating PDK4 Expression

    Background

    Human induced pluripotent stem cells (hiPSCs) hold great potentials in disease modeling, drug screening and cell therapy. However,...

    **hong Xu, Shi Fang, ... Zhicheng Shao in Stem Cell Reviews and Reports
    Article 26 January 2022
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