Search
Search Results
-
Caveats for Watermelon Whole Genome Sequencing
Watermelon is a highly important vegetable crop species worldwide, with its abundance of genetic resources aiding in identifying mechanisms and...
-
Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences
Polyploidy or whole-genome duplication (WGD) is a major event that drastically reshapes genome architecture and is often assumed to be causally...
-
Whole-genome sequencing in medicinal plants: current progress and prospect
Advancements in genomics have dramatically accelerated the research on medicinal plants, and the development of herbgenomics has promoted the...
-
Dynamic changes in whole genome DNA methylation, chromatin and gene expression during mouse lens differentiation
BackgroundCellular differentiation is marked by temporally and spatially coordinated gene expression regulated at multiple levels. DNA methylation...
-
Identification and Expression Pattern Analysis of the bZIP Gene Family Based on the Whole Genome of Rosa chinensis (Jacq.)
AbstractBasic leucine zipper (bZIP) transcription factors play a crucial role in both biotic and abiotic stress responses in plants, making them...
-
Analyses of Genome Regulatory Evolution Following Whole-Genome Duplication Using the Phylogenetic EVE Model
Whole-genome duplications (WGDs) are important in sha** the evolution of complex genomes, including rewiring of genome regulation. To address key...
-
Genome-wide expression analysis of vegetative organs during developmental and herbicide-induced whole plant senescence in Arabidopsis thaliana
BackgroundWhole plant senescence represents the final stage in the life cycle of annual plants, characterized by the decomposition of aging organs...
-
Whole-genome transcriptome and DNA methylation dynamics of pre-implantation embryos reveal progression of embryonic genome activation in buffaloes
BackgroundDuring mammalian pre-implantation embryonic development (PED), the process of maternal-to-zygote transition (MZT) is well orchestrated by...
-
Genome-wide association study considering genotype-by-environment interaction for productive and reproductive traits using whole-genome sequencing in Nellore cattle
BackgroundThe genotype-by-environment interaction (GxE) in beef cattle can be investigated using reaction norm models to assess environmental...
-
Curcumin leads to responses of grapes to aluminum stress by inducing whole genome hypo-methylation
Aluminum (Al) is the most abundant element in the earth crust. Due to the abuse of phosphate fertilizer, acid rain has been frequently observed in...
-
Functional differentiation of olive PLP_deC genes: insights into metabolite biosynthesis and genetic improvement at the whole-genome level
Key MessageThis study identified 16 pyridoxal phosphate-dependent decarboxylases in olive at the whole-genome level, conducted analyses on their...
-
Study of an Enterococcus faecium strain isolated from an artisanal Mexican cheese, whole-genome sequencing, comparative genomics, and bacteriocin expression
Enterococci are ubiquitous microorganisms in almost all environments, from the soil we step on to the food we eat. They are frequently found in...
-
Studying Whole-Genome Duplication Using Experimental Evolution of Chlamydomonas
In this chapter, we present the use of Chlamydomonas reinhardtii in experiments designed to study the evolutionary impacts of whole genome...
-
What Whole Genome Sequencing Has Told Us About Pathogenic Vibrios
When the first microbial genome sequences were published just 20 years ago, our understanding regarding the microbial world changed dramatically. The...
-
Genome and whole-genome resequencing of Cinnamomum camphora elucidate its dominance in subtropical urban landscapes
BackgroundLauraceae is well known for its significant phylogenetic position as well as important economic and ornamental value; however, most...
-
Studying Whole-Genome Duplication Using Experimental Evolution of Spirodela polyrhiza
In this chapter, we present the use of Spirodela polyrhiza in experiments designed to study the evolutionary impact of whole-genome duplication...
-
Whole genome structure and resistance genes in carbapenemase-producing multidrug resistant ST378 Klebsiella pneumoniae
BackgroundCarbapenemase-producing Klebsiella pneumoniae (CPKP) is one of the most dangerous multidrug-resistant (MDR) pathogens in human health due...
-
Optimized whole-genome sequencing workflow for tumor diagnostics in routine pathology practice
Two decades after the genomics revolution, oncology is rapidly transforming into a genome-driven discipline, yet routine cancer diagnostics is still...
-
Dataset including whole blood gene expression profiles and matched leukocyte counts with utility for benchmarking cellular deconvolution pipelines
ObjectivesCellular deconvolution is a valuable computational process that can infer the cellular composition of heterogeneous tissue samples from...
-
The STROMICS genome study: deep whole-genome sequencing and analysis of 10K Chinese patients with ischemic stroke reveal complex genetic and phenotypic interplay
Ischemic stroke is a leading cause of global mortality and long-term disability. However, there is a paucity of whole-genome sequencing studies on...
